TCONS_00006280 (transcript) - C. hemisphaerica

Overview
NameTCONS_00006280
Unique NameTCONS_00006280
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2013

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00006280 ID=TCONS_00006280|Name=TCONS_00006280|organism=Clytia hemisphaerica|type=transcript|length=2013bp
CAGGGATTTAAGATCACCCTATAAATAGCTTacttcatcaaaaaaaaaaa
taataataataatacaacACAATGGCAACTGCAGTCGAACAATTAGGCAA
GGAACctacaatcaaaacaaaatctgCTCAAATCAAGACACTCATCCACA
AACAGATCATTGACGTTGGGGAGGATGTGTTTAAACGAACCAGTGAGAGA
CAACAGCAATTATTCGATGATTATCTCCTCAAACACGAATCAAATCTTCT
CCAAAAACTcgatcaacaaaaacaaaaagctttGAACGACCAGCGACAAA
AACACCATGCAGATCtcaaaagaatcaaagatgaataTTTGAAACTGCAG
GAGGCGGCAATCAAAGAGCAAGGAAAACGCGTAGAGAAACTGATGAATGA
AAGAACTGATCGTTTACTGGAGAAAAAACAACTCGATGGTCAACGCAGAC
TTGATGAAGCCCTGGTAGAAGCGAGGGAAAAATTCAACAGTGAAAAGAAG
GAATGTATAGACAACCTGATTCGAAAACTTCAAAAGGAATTCGATCAGAG
GATGAAAGAAGAGCAAAATCTTCACAAGGAGAACGTCCGAACTTTAAACG
GTGAATGGAAAACTAAACTGCAGAAAAACAATGAGGATAACGCAGTGAAG
CTGTTGGATGAGCTGGAAAAACAACGCTTAGAACTTGATGAATATCACGT
CAAAGAGACCAAACGACAGATGGACGCTCTTGAAACACTTCACCAAGGAG
AATTAGCGGATTGCGAGAAAGACATTcaagaaaagaagaaggaaaacgAG
GAGTTGTCAGAAGAAATCGTGAAACTGAAAGTTCGTACAATAACACATGA
ACAACATGAATTATGATAGTACTGCACTGCTCCAAGAATCTTGCAAAAGG
ATTCTTCACGTAATAGATGATGGGATTGATACATGAGTTCCAAGAAACTG
TTATCATGGCAACCACGTAGAGGTTTTGGATGTTGAACGCTGAGATGAAA
GGGTTGAGAATGTTCGCCAGATTCAAGATCAACCATAAAAGCAAAGGTGT
GATGCAACAAAAATACGCGAGAAGGAGGAAGGTGACTTGTTTTGCCAGCT
TGAGGTGAGTTTTTTGGCTCTTTTGTTGTCGTTTGTTGTCATGTGTTTGG
TCCTCTGCTGGAGGATTTGATGCACTTTTAGTTCCCTCTGATGACGCACC
ACCTTCGTCTTGttgtaatttcattttcaaggaGTCGACGAAATGTCGTT
TGAGAGCAGCTTCCTGTTTTTTGACAACACTAGTGATAAGGAAGTAGCTT
GAACACAATACAATGAAAGGGAGGATGAAAATAGTTATCACAACTCCCAG
ATATGGTACACTCCCGATGAACCGTAAGAAAGGAGTGACAGCTGGTATCA
CCCATGACAACAACACCAGCAACACCATCAACCATTTGGTTGACCTTCGG
TGATAGATTTTCATTTTGGTCATCAGAATGTAACGGTCGAGTGAAATGAC
AGCAAGTGTCAAACACGACGAGCCTTGAAGCATTAGGGAGAAAAAGGCAC
GAACGAAGTCAACATCACAATTCTCCAGAGATTCGTAATTCAACACTTGG
TATGCGGTCATCGGGAAAACGATGACACCAACCAGGAAATCGGAGATAGC
GAGCAAAATGAGGATTTTGTTGGACCTTGATCGACAATCAGGAAGAGAGA
GGATTCTCAAAACAATCGCGTTAGTGAGTGTGGCCAAGATGGATCCAACG
ATGAAGAAAACACTGTAAACAATTGTCATCGGAGGCCGAAGGATGGACAT
TCGAACCTTACAaaccatttttatttattttatgctTTATATTAAGATGA
TTTGATGATGGGACTTGCTGATGATGTTCGGTTTCGGTTTGTTGTCAACA
ATTTTGCTCACCGGGCGTTCTGGTTTATCTGTTTGCTTATTGTTTTGTGA
TGATCGTcaccttaaaacaaaagaaaagaacgttatTGTGAATAACAACA
TAATAAACATCGC
Run BLAST on NCBI

transcript from alignment at sc0000066:743022..750445+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00006280 ID=TCONS_00006280|Name=TCONS_00006280|organism=Clytia hemisphaerica|type=transcript|length=7424bp|location=Sequence derived from alignment at sc0000066:743022..750445+ (Clytia hemisphaerica)
CAGGGATTTAAGATCACCCTATAAATAGCTTacttcatcaaaaaaaaaaa
taataataataatacaacACAATGGCAACTGCAGTCGAACAATTAGGCAA
GGAACctacaatcaaaacaaaatctgCTCAAATCAAGACACTCATCCACA
AACAGATCATTGGTAAGTTGGATACATTCTCTGCTGCTTAagactaaaaa
aaaaacagcataAAAACACGCATTTTAGGGGTCAATCAGTTGAGCACttt
ctttgatatcttttgaatgGAATTTTTTATCACAGTGTTGCTGATCTACG
ATTTCAAGtttcatttttgtgaaaatagtAATTATAGCGTATATATAGTA
GTATTGTGCTGTGATCCTCAGCTCCACTGAGGCCTAGTCCTATATTATAG
GAAggtatatattatattatagtAATTATAGCGCTATTCTacaagaattt
catttttttctttttccttttccttcacttttttgaacgaaattgaaaaa
caaactaGTGGAAATATAAGCGCatttaaatatcttttcaacgatacCAA
CCTTTTTATTATACGACAAATGCTCAAAAATTTATGGCTAAAAAATAAAG
ACACCACACACCTTTTTGACACAGATATAAATactcaaaagttttaaaaa
caggaAAATAAAGAATATTAGTTTCCTTAAGCCAGGTCCCTAAAAACTTG
ATGTGTGCGATTTCGCCGAAATGTTGAATTGTTAGTTTgttgactttttt
atttcagatatTTTTAACAAGGATCCCATAATACCATAACATTGACGTCC
TCAAAATTAACTGGGTGAAAATTGACAATTGTCTCTTAGTGTATTGTTGA
CCATGATTATTTACTTTCCACAGACGTTGGGGAGGATGTGTTTAAACGAA
CCAGTGAGAGACAACAGCAATTATTCGATGATTATCTCCTCAAACACGAA
TCAAATCTTCTCCAAAAACTcgatcaacaaaaacaaaaagctttGAACGA
CCAGCGACAAAAACACCATGCAGATCtcaaaagaatcaaagatgaataTT
TGAAACTGCAGGTAAATCTTCTAAATCCATCGAGTTTCAATATGCTAGTG
AAGAAAGCAAGGAAAGTCTCACATCTTTTTATGTATTTCACAGCTCTTGA
AAGTGTCATGTTCTTCATTTTGAAAGCTTGAAATCATAATTTTGTCAGAT
TTTCttatcatgtttttgatgatttataAGCCTGTGATTTTTGTTCCTTA
AATTCTGTTCTCATTGAAATTTATGGTTCAATCTGTGTTTGAAATAGGAG
GCGGCAATCAAAGAGCAAGGAAAACGCGTAGAGAAACTGATGAATGAAAG
AACTGATCGTTTACTGGAGAAAAAACAACTCGATGGTCAACGCAGACTTG
ATGAAGCCCTGGTAGAAGCGAGGGAAAAATTCAACAGTGAAAAGAAGGAA
TGTATAGACAACCTGATTCGAAAACTTCAAAAGGAATTCGATCAGAGGAT
GAAAGAAGAGCAAAATCTTCACAAGGAGAACGTCCGAACTTTAAACGGTG
AATGGAAAACTAAACTGCAGGTATTTGAAATGATCTCTGTTCAtcgttta
tatattttttttcatgcaGGTATGGAGGGTTAAAACAGAAAAGTTTGTCC
TATCTGATACATCACCAGGGAGAACAGCCCAATTTTCCATTAATATTTCT
GTAACATCTTTAGTCGATAAAAGAGGGTGGGGTACGTAGGTAAAAATAGG
TGCCAACGATAAGGGTCGGTCTTTTAGCTTTTAAAGTCGGTAACAAAGTA
ACGGTTGCAAAAACAAGTCAAAATACTTTAAGtttacaaactttcgcgag
cagaaaccttcgcgaggtcgaaaaatcgcaaaatttgcgacatttacttt
cgcgaatttgagaaaaaagtgtttttcgctagcataaactttcgcgaatc
gttagataaaaatgagaatttttgaataaaaattgccttaaaagtgaaaa
atattccttaaatcagctaaagacggttgctcttcaactttaaaaaggca
ttaaatgataacaatatgccgaaaatttgatatttattatgatttcgagg
ttttatagtttttcaattattttgagattttttcgcgagcataaactttc
gcgaattgccctgataagaattttcaaagccATGTACTTTGGCGAAAAAG
GCTAAagttcgcgaaaatcgcgaaagtttctgctcgcgaaagtttgtacg
cctaaagtagtctGTAGGGATCCCCCTTTTGGTTCTTTTTAAGGACCATG
AAAAGTCAAtaaaatctctctaagggtaggagGTCCCCGCAGTGGTAATA
CTggtcacgatatcacgcaaatttttgtcttcaagcACAATCAcacaaat
cagcaaaaaaattggataattcaattcaattcaaaaatgatttatttgcc
tgcataatttaaactaaaatttacaatatGTGAAAAAATTACAATATAAT
TAGGTTGGGGAGCAGGCCAGGCTCTGACCATCCATATAGAGGTTACCCGA
CTAATCAATGGGGTGACTACCTGGTTGCAAGTATATGTTTGGGATTTTAA
TAATAGGGGAGGGATTATTACACAACAACACATAAAAGTACCGATAGAAC
AAAAAAGATATTTAACAATTAGAactgtaaaaatgaaaaataaaatttta
atcaatttttcaaataagtctcaacttaaaaaaaggaaagtttCTCAAAG
TTGATGAAGTACAGGTAAGGACATAATCAGAGTTAGCTGTGTAGGAGATT
ATCGGCTCTTTTGTTAAGCAGATACAGAGACAGTGAACTTAGGTCTTCTT
TTGAGTGCAATATTAGTTGGTTCCAATTTAATATCGATTGGTATTTTACG
GACTTTAAGCCATAGTTCAAGGTGTTAGCTTTGGGACGTTCTAGGAGCTT
CAGgttcatttttcttgtttgatatGCATGAGAAAAGACTTTGAAATCAA
AGGATTCCTGTAGTGCTGGTGGAGAGATTTTGTTAATAGTTTGGTGTACA
AGTTTGATGTTACACTTGAACACAGTTTGAGCGATTGTAGGTATACCAGT
GTTTTCAAAAAGTTGAGAGGTTTCAGCGTCAAAGTTAGAAAAAGCGAGGA
TGCGAAGACATCGTTTTTGGAGTCGGCCAATTCTTGAGTTTTGAGTCAAT
CCTTGGCCCCAGACAATCTTTGCGTAGAGCATAGTAAAGAGTTTTTATGA
CAGAAACAGGAACAAAATAACGAAGCTTAGCAAGTATACCATTTGCCATG
CCAAGTTCTTTTGCTAGATGGTCAAAATGAGAGTTCCAGGTTAGAAATTC
ATCGAGAAATAGCCCAAGGTGTTTTACGCAAGTTGAGAGTTTAAGTTCGA
AGTCATCGAGCTTTAACTTCATTGAATAGGGAACGGGCTTAAATGTCTGC
TACGGAAGAGCAACACTTCTGTTTTCAATACATTGAGTGAGATTTTATTC
GCTCGGAGCCAAGAGGAGAGTCGTGCAAGGTCAGAATTGACTTTGGTTTC
TAGAGACTGAAGGTCAGAATCAGAGGAGAGGAGACAggtatcatcagcaa
aaagATTCGTTTGACTATTTTGAAGAACATAATGAAGATCATTAATATAG
ATGAGAAAGAGAATAGGTCCAAGGACAGATCCTTGAGGGACTCCGTGATT
AACAGGGCGTTTAAAAGAGTCCACGCCAGAAACAGAGACGTATTGTTGTC
GGTCTGTAAGATATGAACGAAACCATTGATTAGATAAACCCCTCACACCA
TAATGTTTAAGTTTAGACAGTAGTATTTCATGGTCGACCGTGTCAAAAGC
TTTTTGCAAGTCGATGAATACCCCGCAAGAGTAAAGTCCTTTGTCTATGT
TNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNATCAAGAAAAGAGACTAAtctaaattttattatttttt
cgaataTCTTATCGATGTTTGATAGTAGAGATATTGGGCGATAATTATTA
ACATCATGAGCGGAGCCCTTATGTTTAAAAATTGGAATTACTTTAGCCGT
CTTGAGAGGAGTGAAGAATTTACCTGTCTGTAGCGAGTTATTGAAAAGCT
TTGAGATGATTTCTGACACCTCTGctaaaacagtttttaatactTTAGAG
GGTATGCTATAAGGACCGTCAGCTTTAGGTTTAAGATTCAAATTTAAGAT
TTAGGTTTAATCACGCACCCCTTTGAAAATGtccaaatcacgtatcacgg
ttcaaaattttttgaaagcacgatcacgttttgatcAGGAGGGAGCAGAa
tcacgaaaaaaaattgcaaatcacgtaatcacgctgcagaaaaaagtccc
tatcacgtcatcacgcaAACCGTTTGGGGGCCTCGGTTAGGAAATTTTAC
GAAATAAATTATTTCTCTAGGGGTCACTTTTTCGCTAAAActtctctcta
agggttacttTTCGGAGGTCCAGTCCGCATATACTCGACATTCTCCAACC
CCAGTACCCCCTACCGGAAAATGTACAGAATTTGCAAGTAAGCAGCTGAC
GTCATTATATATGGCGTGCTTTACTTGCTTGATGTGAAATCGGCTCTAAT
GTATGTGTTTTAATAAGGTCTTCTGATTTATTTTGGTTCAGAAAAACAAT
GAGGATAACGCAGTGAAGCTGTTGGATGAGCTGGAAAAACAACGCTTAGA
ACTTGATGAATATCACGTCAAAGAGACCAAACGACAGATGGACGCTCTTG
AAACACTTCACCAAGGAGAATTAGCGGATTGCGAGAAAGACATTcaagaa
aagaagaaggaaaacgAGGAGTTGTCAGAAGAAATCGTGAAACTGAAAGG
TGATTTAGGAGAGATGAAACATTCTATGAGACTTGTTATGGAGACGTTTC
GTGATTTCATCGAATCTTGTGAAGGTTTTGGTGAAGGACAAGCAGACTTT
GTACTGGATCATCTGATACcccaaaaaattgaagaatttctAAGAAATTA
ATCTCTTGGTGTTTCTTCGCTCtgatttgaatttcaattattGAACGTGT
GTTGTGTAAATAAAATGAGactgactttttatttttttatatctgATAAA
TTTGACATACTGTACATAACCAAAGTATAATAAGTGTGATTTTACGAATA
AATTAATGATCAAACcttattatttgatttttttaacatcTTAAGGCCCC
TTCATCATCGATTGCACCAGGAAAATCTCCTGCTTCGAATTTTTGGAAAG
CACTTTTGTGAGCACAAGCAAATTATCAGTTGTTAAGCGTTTGACTAACG
attgttcgtgacgtaatttgtAACAAAgccttttctaaaaaaactaacCA
ATTGTCTTTCATTTTAGTTCGTACAATAACACATGAACAACATGAATTAT
GATAGTACTGCACTGCTCCAAGAATCTTGCAAAAGGTCTCCATTATATGa
agttcaaaatattaaaatttaccGAAGAATTTGTATTCCACGGTATAGAC
CGGCTGTTACCCAGTAGCGTAGACTAGAGgagcgcaaaatttgtgtagga
gaacaGATTTTTATGCCAcagtaaatatctttttatctcATGTATGGATG
ATTTGCTCTCcttcacaaattttgcgcccctttTGTCTACGCTATTGGCT
GGCGTCAATCTTCCCAAGTAAGAATGCagacaaaataattatttttccgC
ATTATTGTCGTGATTTTAAAAGGATCCATTAtacacaaaaaaaaatacaa
actcgGGTAATAATCTATATACTACTACTATACTAACTGTTTATACGGAC
AATAACGTAAGATATTGACCTCTGTCAAACACGTATTACCCCCGTGCGTA
AATAGTTGGGTTagtaatatttttcaattttgtttttatcttggaCAAGA
ATCAATCCTTTCTTCTACAGATAGTGATATATATTGCATTTTATATGGCT
TGTTGGAGAAGCAGCAATTAAATGTCCcaagaaaatagcaaagtaaACCA
TACAAGCAACGTCTCACTTTTTCATGTCGTTTTTGAATAGGTTGCAGTTG
AGTCATTGTTCTTCACACGTTTGATGCCAAACATTTTACGAAAACCTCTT
CGGATTTCAGGATTCTTCACGTAATAGATGATGGGATTGATACATGAGTT
CCAAGAAACTGTTATCATGGCAACCACGTAGAGGTTTTGGATGTTGAACG
CTGAGATGAAAGGGTTGAGAATGTTCGCCAGATTCAAGATCAACCATAAA
AGCAAAGGTGTGATGCAACAAAAATACGCGAGAAGGAGGAAGGTGACTTG
TTTTGCCAGCTTGAGGTGAGTTTTTTGGCTCTTTTGTTGTCGTTTGTTGT
CATGTGTTTGGTCCTCTGCTGGAGGATTTGATGCACTTTTAGTTCCCTCT
GATGACGCACCACCTTCGTCTTGttgtaatttcattttcaaggaGTCGAC
GAAATGTCGTTTGAGAGCAGCTTCCTGTTTTTTGACAACACTAGTGATAA
GGAAGTAGCTTGAACACAATACAATGAAAGGGAGGATGAAAATAGTTATC
ACAACTCCCAGATATGGTACACTCCCGATGAACCGTAAGAAAGGAGTGAC
AGCTGGTATCACCCATGACAACAACACCAGCAACACCATCAACCATTTGG
TTGACCTTCGGTGATAGATTTTCATTTTGGTCATCAGAATGTAACGGTCG
AGTGAAATGACAGCAAGTGTCAAACACGACGAGCCTTGAAGCATTAGGGA
GAAAAAGGCACGAACGAAGTCAACATCACAATTCTCCAGAGATTCGTAAT
TCAACACTTGGTATGCGGTCATCGGGAAAACGATGACACCAACCAGGAAA
TCGGAGATAGCGAGCAAAATGAGGATTTTGTTGGACCTTGATCGACAATC
AGGAAGAGAGAGGATTCTCAAAACAATCGCGTTAGTGAGTGTGGCCAAGA
TGGATCCAACGATGAAGAAAACACTGTAAACAATTGTCATCGGAGGCCGA
AGGATGGACATTCGAACCTTACAaaccatttttatttattttatgctTTA
TATTAAGATGATTTGATGATGGGACTTGCTGATGATGTTCGGTTTCGGTT
TGTTGTCAACAATTTTGCTCACCGGGCGTTCTGGTTTATCTGTTTGCTTA
TTGTTTTGTGATGATCGTcaccttaaaacaaaagaaaagaacgttatTGT
GAATAACAACATAATAAACATCGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_003587XLOC_003587Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00006280-exon-sc0000066-1491911889:743022..743183TCONS_00006280-exon-sc0000066-1491911889:743022..743183Clytia hemisphaericaexon
TCONS_00006280-exon-sc0000066-1510915933:743022..743183TCONS_00006280-exon-sc0000066-1510915933:743022..743183Clytia hemisphaericaexon
TCONS_00006280-exon-sc0000066-1575043694:743022..743183TCONS_00006280-exon-sc0000066-1575043694:743022..743183Clytia hemisphaericaexon
TCONS_00006280-exon-sc0000066-1491911889:743895..744082TCONS_00006280-exon-sc0000066-1491911889:743895..744082Clytia hemisphaericaexon
TCONS_00006280-exon-sc0000066-1510915933:743895..744082TCONS_00006280-exon-sc0000066-1510915933:743895..744082Clytia hemisphaericaexon
TCONS_00006280-exon-sc0000066-1575043694:743895..744082TCONS_00006280-exon-sc0000066-1575043694:743895..744082Clytia hemisphaericaexon
TCONS_00006280-exon-sc0000066-1491911889:744319..744591TCONS_00006280-exon-sc0000066-1491911889:744319..744591Clytia hemisphaericaexon
TCONS_00006280-exon-sc0000066-1510915933:744319..744591TCONS_00006280-exon-sc0000066-1510915933:744319..744591Clytia hemisphaericaexon
TCONS_00006280-exon-sc0000066-1575043694:744319..744591TCONS_00006280-exon-sc0000066-1575043694:744319..744591Clytia hemisphaericaexon
TCONS_00006280-exon-sc0000066-1491911889:747863..748070TCONS_00006280-exon-sc0000066-1491911889:747863..748070Clytia hemisphaericaexon
TCONS_00006280-exon-sc0000066-1510915933:747863..748070TCONS_00006280-exon-sc0000066-1510915933:747863..748070Clytia hemisphaericaexon
TCONS_00006280-exon-sc0000066-1575043694:747863..748070TCONS_00006280-exon-sc0000066-1575043694:747863..748070Clytia hemisphaericaexon
TCONS_00006280-exon-sc0000066-1491911889:748589..748656TCONS_00006280-exon-sc0000066-1491911889:748589..748656Clytia hemisphaericaexon
TCONS_00006280-exon-sc0000066-1510915933:748589..748656TCONS_00006280-exon-sc0000066-1510915933:748589..748656Clytia hemisphaericaexon
TCONS_00006280-exon-sc0000066-1575043694:748589..748656TCONS_00006280-exon-sc0000066-1575043694:748589..748656Clytia hemisphaericaexon
TCONS_00006280-exon-sc0000066-1491911889:749332..750445TCONS_00006280-exon-sc0000066-1491911889:749332..750445Clytia hemisphaericaexon
TCONS_00006280-exon-sc0000066-1510915933:749332..750445TCONS_00006280-exon-sc0000066-1510915933:749332..750445Clytia hemisphaericaexon
TCONS_00006280-exon-sc0000066-1575043694:749332..750445TCONS_00006280-exon-sc0000066-1575043694:749332..750445Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000066supercontigsc0000066:743022..750445 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.89141	1.65315	1.0624	0.820511	0.993582	0.867899	0.848026	0.345484	0.963779	1.84488	2.50027	2.18277	4.32004	3.82221	4.64443	5.31665	1.28512	2.39909	6.29675	5.12774	0.802875	1.10093	0.978107	1.82852	0.226607	0.67418	0.640439	0.715973	0.879434	0.591294
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000276GPCR_Rhodpsn
IPR017452GPCR_Rhodpsn_7TM
Vocabulary: Biological Process
TermDefinition
GO:0007186G-protein coupled receptor signaling pathway
Vocabulary: Molecular Function
TermDefinition
GO:0004930G-protein coupled receptor activity
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007186 G-protein coupled receptor signaling pathway
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0004930 G-protein coupled receptor activity
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00006280 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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