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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00006358 ID=TCONS_00006358|Name=TCONS_00006358|organism=Clytia hemisphaerica|type=transcript|length=1005bp
gaggaggtccatttccgttccaagggggtaaggtttgaaatgcagtggaa
ttccataagggtagacgaaaatccgtcaaaaataagcggaattccaaggg
ggtaatgattgaaattttgtaaaaattcgaaattccaagggggtaatgat
tgaaaatttgtaaaattcggaattccaagggggtaggtcacaaaaggttg
gacctcctcaacagggggtgcacggtttttttctggaaaagcccatctTT
CAATCATTAGATACAGTATCTTAGGGCCTTTTAGGCAAAAATAGTAAATA
ATGGTAAATAGTTGACCCTCTGCGCCAAAAAACATGTCACGTTTCTCTGA
ATCATATGAAAAATTACTAAAGGACAaagatcaaaatcaaaaagtaaaaa
cgccCTATCCGCGCCCATCTTTTTTGACGACTGGATGGCAGACGAGAAGT
AGATATATTATAAAACTTAGAATTAACgacaaaatctttttcttccgCAA
TACTATGatgtttcttcaaaaacaattttaaaaacaaaatgaagacAATC
AATCAGCTTCCTAAAGATAACATAAAATGAGATATCAACCACAAAAACGA
CATTAGCCTGAATACAGTTTGATGTACCGTTGAGTAATTGTTTCTAGCAA
TGATATTCGAACACACGTCGTTGAAATGCGATCAACATTCCACCACAAAT
GAAGATTTCTGTATAATAAAACCACCTTCCATCGCAAGGCATTGCTCTAT
TTTCACATATTCTACCTTTGCAGCGACCtcgtttttccttcaaacatTTA
GACGaacatttagtgacgtcatttgtATTCAAGCATTTTGAGGTACAATC
ATCCGAAGGTATTGGCACACATTGGCAATAATGAACAATACCAATGATGA
TTAATACGAGAAGATAGATTTTCAAACGCATCTTCATTGAAGGGATGAAA
TTTTCTGAATCTGAACCAGTTCTTAATGCATAGAATGTTCTCTTGTCGAA
CTTTA Run BLAST on NCBI protein sequence of TCONS_00006358-protein >TCONS_00006358-protein ID=TCONS_00006358-protein|Name=TCONS_00006358-protein|organism=Clytia hemisphaerica|type=polypeptide|length=119bp
KFDKRTFYALRTGSDSENFIPSMKMRLKIYLLVLIIIGIVHYCQCVPIPS
DDCTSKCLNTNDVTKCSSKCLKEKRGRCKGRICENRAMPCDGRWFYYTEI
FICGGMLIAFQRRVFEYHC Run BLAST on NCBI transcript from alignment at sc0000066:412746..413750 Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00006358 ID=TCONS_00006358|Name=TCONS_00006358|organism=Clytia hemisphaerica|type=transcript|length=1005bp|location=Sequence derived from alignment at sc0000066:412746..413750 (Clytia hemisphaerica)
TAAAGTTCGACAAGAGAACATTCTATGCATTAAGAACTGGTTCAGATTCA
GAAAATTTCATCCCTTCAATGAAGATGCGTTTGAAAATCTATCTTCTCGT
ATTAATCATCATTGGTATTGTTCATTATTGCCAATGTGTGCCAATACCTT
CGGATGATTGTACCTCAAAATGCTTGAATacaaatgacgtcactaaatgt
tCGTCTAAatgtttgaaggaaaaacgaGGTCGCTGCAAAGGTAGAATATG
TGAAAATAGAGCAATGCCTTGCGATGGAAGGTGGTTTTATTATACAGAAA
TCTTCATTTGTGGTGGAATGTTGATCGCATTTCAACGACGTGTGTTCGAA
TATCATTGCTAGAAACAATTACTCAACGGTACATCAAACTGTATTCAGGC
TAATGTCGTTTTTGTGGTTGATATCTCATTTTATGTTATCTTTAGGAAGC
TGATTGATTgtcttcattttgtttttaaaattgtttttgaagaaacatCA
TAGTATTGcggaagaaaaagattttgtcGTTAATTCTAAGTTTTATAATA
TATCTACTTCTCGTCTGCCATCCAGTCGTCAAAAAAGATGGGCGCGGATA
GggcgtttttactttttgattttgatcttTGTCCTTTAGTAATTTTTCAT
ATGATTCAGAGAAACGTGACATGTTTTTTGGCGCAGAGGGTCAACTATTT
ACCATTATTTACTATTTTTGCCTAAAAGGCCCTAAGATACTGTATCTAAT
GATTGAAagatgggcttttccagaaaaaaaccgtgcaccccctgttgagg
aggtccaaccttttgtgacctacccccttggaattccgaattttacaaat
tttcaatcattacccccttggaatttcgaatttttacaaaatttcaatca
ttacccccttggaattccgcttatttttgacggattttcgtctaccctta
tggaattccactgcatttcaaaccttacccccttggaacggaaatggacc
tcctc Coding sequence (CDS) from alignment at sc0000066:412746..413750 >TCONS_00006358 ID=TCONS_00006358|Name=TCONS_00006358|organism=Clytia hemisphaerica|type=CDS|length=360bp|location=Sequence derived from alignment at sc0000066:412746..413750 (Clytia hemisphaerica)
AAGTTCGACAAGAGAACATTCTATGCATTAAGAACTGGTTCAGATTCAGA
AAATTTCATCCCTTCAATGAAGATGCGTTTGAAAATCTATCTTCTCGTAT
TAATCATCATTGGTATTGTTCATTATTGCCAATGTGTGCCAATACCTTCG
GATGATTGTACCTCAAAATGCTTGAATacaaatgacgtcactaaatgttC
GTCTAAatgtttgaaggaaaaacgaGGTCGCTGCAAAGGTAGAATATGTG
AAAATAGAGCAATGCCTTGCGATGGAAGGTGGTTTTATTATACAGAAATC
TTCATTTGTGGTGGAATGTTGATCGCATTTCAACGACGTGTGTTCGAATA
TCATTGCTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00006358-exon-sc0000066-1491911889:412746..413750 | TCONS_00006358-exon-sc0000066-1491911889:412746..413750 | Clytia hemisphaerica | exon |
| TCONS_00006358-exon-sc0000066-1510915933:412746..413750 | TCONS_00006358-exon-sc0000066-1510915933:412746..413750 | Clytia hemisphaerica | exon |
| TCONS_00006358-exon-sc0000066-1575043694:412746..413750 | TCONS_00006358-exon-sc0000066-1575043694:412746..413750 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000066 | supercontig | sc0000066:412746..413750 . |
Blast
The following BLAST results are available for this feature:
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