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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00046103 ID=TCONS_00046103|Name=TCONS_00046103|organism=Clytia hemisphaerica|type=transcript|length=1081bp
TAAAATTTTGGTCTCTTTCTAGATTTTAACTAGTCTCTTTCCCCCTTTAG
ATTTTTTCTTGATTACAATTTggctaaatatttttattgaacatttttat
tttaaacaagAAAGACGATCATTGTGTTGAATGTCCATATGCTCCATGTC
TGTGATTTACGACGTGTGCGGCCTCTAGAGACCATCAATTAATATGTCGA
GTTGTCAATTTCATTCTCGAGGGAGAAATATCTTTAACCACTTCCGATCA
TATAAAAGGAAATATTTGCCATTGACGCGCTTTCAATTCAtttgttcaat
tgattcgatGGGGGCAGTTAGGGAGTTTATTGAAAGGTGATGGTTTTTGT
ATATTTATATTCTACGTATCTgaaagttttcctttttttattttgcaagT
GAATGTTGAAGAAATCAAgagttcatttttgaaattttgcataatATGTC
TCATCCGGGAAAAACAAATCAGTTTTAGTAaggtaaaaagtttttaagaa
gTTTTGTAGTAATTTTATTTCGACCAGTCAACGTGTAGGTGCAGAGTATA
AAAAGCTGTGATCCGTTTTTGATCAGAATAATTGATCGGTTAAGACTCCG
ATTATTTTCTAAACtttacttttaactttttataacTCTTGAACAGTTTT
CTCCACGTTAAGAATTATTCATCTGCATCTTATCATGGTATTGGAAACCT
GCATATCCAGCAAGTGTGCATCGACTTTTTCTAAGCCGCAGCTGGGTTTG
AGTCTCAGAAAAAATTGCATCCTTATTCtaataaagtttttgaatacTGC
TCTCAAGCTAACGAAGTGACGTCACCGTCCCCGTAAAATCGAAGTCGTTG
CACGCTTGCTAGTCCTGTAGATTTAAAACACCATGATCGTCATGATGGGT
GccttttctcaaattttacttaAACTAAAATTAAAGGACATTTTTGTGAC
CATGCTAGAAATACTTATTATtaggtaaaaaaaaatctagCTGAAATGTT
TCCACCTTCAATTCTTGAATCATTATTGGGTGAGAATAAAATTTTCgatt
tgacttttttgaaaatttttttttactgaac Run BLAST on NCBI transcript from alignment at scaffold_105:301521..302601 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00046103 ID=TCONS_00046103|Name=TCONS_00046103|organism=Clytia hemisphaerica|type=transcript|length=1081bp|location=Sequence derived from alignment at scaffold_105:301521..302601 (Clytia hemisphaerica)
gttcagtaaaaaaaaattttcaaaaaagtcaaatcGAAAATTTTATTCTC
ACCCAATAATGATTCAAGAATTGAAGGTGGAAACATTTCAGctagatttt
tttttacctaATAATAAGTATTTCTAGCATGGTCACAAAAATGTCCTTTA
ATTTTAGTTtaagtaaaatttgagaaaaggCACCCATCATGACGATCATG
GTGTTTTAAATCTACAGGACTAGCAAGCGTGCAACGACTTCGATTTTACG
GGGACGGTGACGTCACTTCGTTAGCTTGAGAGCAgtattcaaaaacttta
ttaGAATAAGGATGCAATTTTTTCTGAGACTCAAACCCAGCTGCGGCTTA
GAAAAAGTCGATGCACACTTGCTGGATATGCAGGTTTCCAATACCATGAT
AAGATGCAGATGAATAATTCTTAACGTGGAGAAAACTGTTCAAGAgttat
aaaaagttaaaagtaaaGTTTAGAAAATAATCGGAGTCTTAACCGATCAA
TTATTCTGATCAAAAACGGATCACAGCTTTTTATACTCTGCACCTACACG
TTGACTGGTCGAAATAAAATTACTACAAAActtcttaaaaactttttacc
tTACTAAAACTGATTTGTTTTTCCCGGATGAGACATattatgcaaaattt
caaaaatgaactcTTGATTTCTTCAACATTCActtgcaaaataaaaaaag
gaaaactttcAGATACGTAGAATATAAATATACAAAAACCATCACCTTTC
AATAAACTCCCTAACTGCCCCCatcgaatcaattgaacaaaTGAATTGAA
AGCGCGTCAATGGCAAATATTTCCTTTTATATGATCGGAAGTGGTTAAAG
ATATTTCTCCCTCGAGAATGAAATTGACAACTCGACATATTAATTGATGG
TCTCTAGAGGCCGCACACGTCGTAAATCACAGACATGGAGCATATGGACA
TTCAACACAATGATCGTCTTTcttgtttaaaataaaaatgttcaataaaa
atatttagccAAATTGTAATCAAGAAAAAATCTAAAGGGGGAAAGAGACT
AGTTAAAATCTAGAAAGAGACCAAAATTTTA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00046103-exon-scaffold_105-1491911889:301521..302601 | TCONS_00046103-exon-scaffold_105-1491911889:301521..302601 | Clytia hemisphaerica | exon |
| TCONS_00046103-exon-scaffold_105-1510915933:301521..302601 | TCONS_00046103-exon-scaffold_105-1510915933:301521..302601 | Clytia hemisphaerica | exon |
| TCONS_00046103-exon-scaffold_105-1575043694:301521..302601 | TCONS_00046103-exon-scaffold_105-1575043694:301521..302601 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_105 | supercontig | scaffold_105:301521..302601 . |
Blast
The following BLAST results are available for this feature:
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