TCONS_00046117 (transcript) - C. hemisphaerica

Overview
NameTCONS_00046117
Unique NameTCONS_00046117
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length114

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00046117 ID=TCONS_00046117|Name=TCONS_00046117|organism=Clytia hemisphaerica|type=transcript|length=114bp
CATCAATACGTGGAGTAAGGTAGATGGGCGCTGATTGGCTACTTGGGAAA
GATAGATGGGCGCTGATTGGCTACTTGGGAAAGATAGAAGAAATggatga
aaattcaattttca
Run BLAST on NCBI

transcript from alignment at scaffold_105:692625..692738

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00046117 ID=TCONS_00046117|Name=TCONS_00046117|organism=Clytia hemisphaerica|type=transcript|length=114bp|location=Sequence derived from alignment at scaffold_105:692625..692738 (Clytia hemisphaerica)
tgaaaattgaattttcatccATTTCTTCTATCTTTCCCAAGTAGCCAATC
AGCGCCCATCTATCTTTCCCAAGTAGCCAATCAGCGCCCATCTACCTTAC
TCCACGTATTGATG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_029461XLOC_029461Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00046117-exon-scaffold_105-1491911889:692625..692738TCONS_00046117-exon-scaffold_105-1491911889:692625..692738Clytia hemisphaericaexon
TCONS_00046117-exon-scaffold_105-1510915933:692625..692738TCONS_00046117-exon-scaffold_105-1510915933:692625..692738Clytia hemisphaericaexon
TCONS_00046117-exon-scaffold_105-1575043694:692625..692738TCONS_00046117-exon-scaffold_105-1575043694:692625..692738Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_105supercontigscaffold_105:692625..692738 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00046117 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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