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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00046318 ID=TCONS_00046318|Name=TCONS_00046318|organism=Clytia hemisphaerica|type=transcript|length=509bp
acatCTTTTTTTGATTAGATTCGATTATCGTTCGCTTGGTGTTCGATTGA
CgttcgattagtttcgattagCTTCGATTGCATATActtttcgattgatt
cgattagtTCGCAtacagtggcggcctggcagggggtgcagggtgtgcag
tgcaccacccagaaagatctgagaggggcgccaaaaaccttttcaagggg
gcgccaaaattttgttgatgtttaattgggcaatTTGGCGCCATTTAGCA
CGTTTATAGCGCCGTACAATGTTATCTTTTACGCCTGCGGCGCTTTATTT
TACCCTCTTGCatcctttctcttgaattttttcaaaacttttatcaatat
tgaatcagaagtaagagaagtgttgtgtatccaacAGGGGTTAAGGTGAA
TGTGTCGCCCTTATGAATTTTGGCATATGAGAGTGCTCTTCCGCGGCCCG
CTAGAAATGTTTGTTTGACAGATATGAAAGTCAGTTTTGATGGAAATCCA
AGATGGTGG Run BLAST on NCBI transcript from alignment at scaffold_108:609852..610797- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00046318 ID=TCONS_00046318|Name=TCONS_00046318|organism=Clytia hemisphaerica|type=transcript|length=946bp|location=Sequence derived from alignment at scaffold_108:609852..610797- (Clytia hemisphaerica)
ACATCTTTTTTTGATTAGATTCGATTATCGTTCGCTTGGTGTTCGATTGA
CGTTCGATTAGTTTCGATTAGCTTCGATTGCATATACTTTTCGATTGATT
CGATTAGTTCGCATACAGTGGCGGCCTGGCAGGGGGTGCAGGGTGTGCAG
TGCACCACCCAGAAAGATCTGAGAGGGGCGCCAAAAACCTTTTCAAGGGG
GCGCCAAAATTTTGTTGATGTTTAATTGGGCAATTTGGCGCCATTTAGCA
CGTTTATAGCGCCGTACAATGTTATCTTTTACGCCTGCGGCGCTTTATTT
TACCCTCTTGCATCCTTTCTCTTGAATTTTTTCAAAACTTTTATCAATAT
TGAATCAGAAGTAAGAGAAGTGTTGTGTATCCAACAGGGGTTAAGGTGAC
CGATGGCTAAATCTTCATGATGCACCGGCCTTGCAAGTACACACGCGCGG
GCACGCGCGGGCAAAATATTGTGCGCGTAAGCGCACAGGCGAGCGCAGCG
TTTTGTTAGGGATCATCCCTAACATGCACCCAGACGGCTGTGCACCCTCC
CGGTGGTGCACCCGTGTGTGTGGTCTTCCTGGAGGAATGGCGATCATAAC
AGTTAGCCTAACTCGTGAGGTCTGTTCACCCGTATATACTATATATGTCA
CTCTATAAATAACCTTGAATTTCGAAAAATCAGCAGTCGTCGTGGCCCAG
TGGTATAGACTACGTGTTTCGTAATCGGAAACATGTAGGTTCGAACCGGG
GTAAAGTATTGGAAAGTTTCAAAAAATTTTCTAAGTCTCCGTGCTTGTCG
GTGCATCATGAAGATTTAGCCATAGGTTTAAGGTGAATGTGTCGCCCTTA
TGAATTTTGGCATATGAGAGTGCTCTTCCGCGGCCCGCTAGAAATGTTTG
TTTGACAGATATGAAAGTCAGTTTTGATGGAAATCCAAGATGGTGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00046318-exon-scaffold_108-1575043694:610403..610797 | TCONS_00046318-exon-scaffold_108-1575043694:610403..610797 | Clytia hemisphaerica | exon |
| TCONS_00046318-exon-scaffold_108-1575043694:609852..609965 | TCONS_00046318-exon-scaffold_108-1575043694:609852..609965 | Clytia hemisphaerica | exon |
| TCONS_00046318-exon-scaffold_108-1510915933:610403..610797 | TCONS_00046318-exon-scaffold_108-1510915933:610403..610797 | Clytia hemisphaerica | exon |
| TCONS_00046318-exon-scaffold_108-1510915933:609852..609965 | TCONS_00046318-exon-scaffold_108-1510915933:609852..609965 | Clytia hemisphaerica | exon |
| TCONS_00046318-exon-scaffold_108-1491911889:610403..610797 | TCONS_00046318-exon-scaffold_108-1491911889:610403..610797 | Clytia hemisphaerica | exon |
| TCONS_00046318-exon-scaffold_108-1491911889:609852..609965 | TCONS_00046318-exon-scaffold_108-1491911889:609852..609965 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_108 | supercontig | scaffold_108:609852..610797 - |
Blast
The following BLAST results are available for this feature:
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