TCONS_00046672 (transcript) - C. hemisphaerica

Overview
NameTCONS_00046672
Unique NameTCONS_00046672
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1095

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00046672 ID=TCONS_00046672|Name=TCONS_00046672|organism=Clytia hemisphaerica|type=transcript|length=1095bp
GAGGAACTAGGGGATGATCAGTCATCTCGCTGGCAGGACTCCAAAGTGGA
CAGATGTTTATATTTTATGCCAGGAAATTTAGATCCTCCTAAATACGGAT
TTGACCTTGATGACTGCTCTGAGGATTATGCTCTTATTGGCACAGAGAAA
AAGAATGGAGCTTGTGGAGGTGGAAGTAGCAGCCCACCCAAAGTTGGTGA
TCATTGTATCAGTGTCTTAGACTCTGGGACCAATTCGGGCAGGGACTTTA
ATGCTATGTTTCCAGATAAGGAAATATTCATGGCAGAAAGTCAAGCAAAT
AGAATGCCCCAAAGTACGATTGATGCAATAACACAAAGTGACGTTGGTGG
CAATGATAAAATCTGGACCCCTTTCATTTGGTCTGACACTCGCGCATGGC
TAACTTAtgGTGATGTTTATGTAGAACCACCGGATGATTTTTTCTACGAA
GAAGATTGGGAATGCCTCGTTTTGGAATCAAATAAAAAGTTAAGGCCAGA
AACGTGCAGCGGTGTTTCTTATGATACACTTTGCTTTTATGaaaaagatg
gaTCAGCAAGCTCTTCTGAAGCGTTCGAATCATCAAGTACCGAAGCTTTC
GAATCATCAAGTACCGAAGCTTTCGAATCATTAAGTACTGAAGCTTTTGA
AATTACGCCCACACCCACCCTGGATAGTGATGGCATGACATCCACCTATC
AGTATATGGAGCAGACGTCAACTTTAAATATCGAACCAACGCCTTCAGCC
AGTATTGTAACACCCTCTTCGTCTGTCAGTGGCGGGGGCGGTGGTGACAG
AGCGTGCAGGTTGGATAATGTGACGGTGACGGCAAAAAGAGTGAATGCGC
AAATATGCATTCAAAAAGCATCCAACCCCGACAATTATCTTATTCCAATT
TTAAAGACCTTCCCTCAAGCCGCCAAATATTGTGGTGAATTACAAGGAGA
GTTATTACAATTTCCATCGCAAGCTGCTTACGATATTTTGGCTGACTTTA
TTACGGCAGACGAAgacttgaaaaatattggaaCGGTGCACTTAGGTGGT
CACGATTTTGGTGTTGAAGGCCAAGTTCTATGGTTAGATGGTAAG
Run BLAST on NCBI

protein sequence of TCONS_00046672-protein

>TCONS_00046672-protein ID=TCONS_00046672-protein|Name=TCONS_00046672-protein|organism=Clytia hemisphaerica|type=polypeptide|length=365bp
EELGDDQSSRWQDSKVDRCLYFMPGNLDPPKYGFDLDDCSEDYALIGTEK
KNGACGGGSSSPPKVGDHCISVLDSGTNSGRDFNAMFPDKEIFMAESQAN
RMPQSTIDAITQSDVGGNDKIWTPFIWSDTRAWLTYGDVYVEPPDDFFYE
EDWECLVLESNKKLRPETCSGVSYDTLCFYEKDGSASSSEAFESSSTEAF
ESSSTEAFESLSTEAFEITPTPTLDSDGMTSTYQYMEQTSTLNIEPTPSA
SIVTPSSSVSGGGGGDRACRLDNVTVTAKRVNAQICIQKASNPDNYLIPI
LKTFPQAAKYCGELQGELLQFPSQAAYDILADFITADEDLKNIGTVHLGG
HDFGVEGQVLWLDGK
Run BLAST on NCBI

transcript from alignment at scaffold_116:710879..716789+

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00046672 ID=TCONS_00046672|Name=TCONS_00046672|organism=Clytia hemisphaerica|type=transcript|length=5911bp|location=Sequence derived from alignment at scaffold_116:710879..716789+ (Clytia hemisphaerica)
GAGGAACTAGGGGATGATCAGTCATCTCGCTGGCAGGACTCCAAAGTGGA
CAGATGTTTATATTTTATGCCAGGAAATTTAGATCCTCCTAAATACGGAT
TTGACCTTGATGACTGCTCTGAGGATTATGCTCTTATTGGCACAGAGAAA
AAGAATGGAGGTAAGTTGTGTATCTTTTttattactcttaggttccaaat
aattGCCCCCTCcgccgcttgttaatttttcgaaaatattccATTTTTCC
GAATCTTTCTACAATCCGAATTAAGATATTGGTCCCCTTTAGCTGGCCAG
TCAATAAAAAACACCTTCCATAATTCGAAGAACATTTTTGGTTTCATcaa
gatcaaattagagagaaGTTTGACCGTATTTGATTGTTAGAGTGTTTTCA
ATTTTAGCTTGTGGAGGTGGAAGTAGCAGCCCACCCAAAGTTGGTGATCA
TTGTATCAGTGTCTTAGACTCTGGGACCAATTCGGGCAGGGACTTTAATG
CTATGTTTCCAGATAAGGAAATATTCATGGCAGAAAGTCAAGCAAATAGA
ATGCCCCAAAGTACGATTGATGCAATAACACAAAGTGACGTTGGTGGCAA
TGATAAAATCTGGACCCCTTTCATTTGGTCTGACACTCGCGCATGGCTAA
CTTAtggtaaaaatattatttttgatcCCTAGGGGAGCCTACACCATGGG
CGGGGGCGGTCATTCATTTGAGATATGCACCCCTGCAATACCTAACACTC
GCGCATGGCTGATTTACGGTTAGGATATTAGTTACAGAAGGGGCGGAGCG
GAATTTCTTTTGGTGAGGGCATTTCACGATATGCACCGCttcgatgtttt
tttttgatatGACATGCATcactttatataccctggaccaagtttctcaa
tcccgtcCAGACAAAACCTTTAATCGGAGTTTTATGAAAAGtcgtaccct
aatggcggcactactcaatagcggtgtaaatgcatcgagagcgctagatc
tactttcccttgaaaacttttgataataccgagtttatgtatgtgtgttt
tttagcgacggagacggtaaggttctaatttgactagatcatgaccaact
gaggacgacggtaaatcagcACTTTTACCGTCCTTGATTTTGCGGGTCAG
AAGTGCGGGTTATTCCAAATCGCTTCAGTCACTCTACCGTCCTCAAAAGT
GCAAATACATAAACTCGCTACGTAGCGCCGTTAGACGTTAATTTTTAACA
CTGCAATGGCTTCTATACGGGTACCAATTCAAAAAAAACTTCGATCAAAG
ATGGTGGATGTAGCTTGGTCCAGGGATATATAAAGGTCAGTGATCACTGC
AATGTCTTCGACCTCACAGCGGGCTTATGGTCTTGTAATAAGTCACTTGG
AACCAATCAGCTGAATATTCATGAGTGTTCTGTGATGTATGAACACTCTA
ATAACATAACAAGCAAAACCTTAATCAAAGATTGTACTACTCAATAGCGG
TGTAAATACAAAGAGAGCGATAAATCTACTTTTACCCAAATAATTGTGAT
GATATAGCGTAGCCCATGGTCCGCTTAAAACTTTTTTATAGACTGGATGG
CGCGATTAAGTGACCCGGTAATATATGGTAATATCCTTTGCTTAGGCGGA
CCGTAAAACAGTCCGCCAGATTTTAGTTGTTTTTGGAAGGTAAAAATAGT
ATGAAACAATGTTTTTATTTGAGAATAAGGGATTGCAAATCTGTCATTGA
TCTTTGTTTCTCATTTATGATAATATCTGTCAACTCCAAGTAGTTTTATT
GTTATTTGGATTTTTAACATTTTTTCTCAAAATGGTGACCTCGCCAAATG
CTCCTAGTCTACTTCACTGGACTCAGAGTCATAAAGAATTATCAAAAAGC
AAAGTTCAGCCAAAGGTAGACTCTAGTCTAGATATAGCGCCGTTTTACAT
TAATTTTTAACACTTCTTCTTAAGAGGTACCACTTTGAAAAAAAACATAA
AGATAGTGGACATAGCGTGGTCCAGGGTCTATATACTCTATACCAGAGTG
TATCTTACGTTTATCGCTTCGTAGTACACTCTCTGCGCATTGTCTGTTTG
ATAAAAAAACTTCCGTACGGAGACCTCTGCGATGAAATATGATTTATAGA
TAGCAAAACTGCTCTCATTGTCTCCTCTCTCACCAACACTCCATCGCAGC
GGTCGGTTTGAAAAATCTCAAATGAGAAAAGACAATGACAACAGACCCAC
TACGGCGATAAATTTTGAAATCAGTCGTAGATACTGGGTCTGTGTACAGA
CAAGGGTCTATATAGTGATTTTAATCCTTTTTCTCTTGTATTTCTTTAGG
TGATGTTTATGTAGAACCACCGGATGATTTTTTCTACGAAGAAGATTGGG
AATGCCTCGTTTTGGAATCAAATAAAAAGTTAAGGCCAGAAACGTGCAGC
GGTGTTTCTTATGATACACTTTGCTTTTATGGTGAGTGTCCGTAGTGCTA
GGTAGAGCATTCAGCTACGGTGCGCAAGGTTGTGGGTTCGATCCCCGATC
GGGTCATACCAAAGACTTTGTACAAAATTTACTTGATATCTCCCTGCTCA
GTAATTAAAGTGAAGGATAAGTGGTTCGATAGCTTCAACCGGAAACTTGG
TCCTCCGGAAACGTGAAcccccccccccccccgaaacaTGATCCCTCCCC
CGAAACATAAtcatccgccaaaattaatGGTCCAAATATAAATATTACTT
CAAGTTTTGTCAACTCGCGTAAAAGaggaataaaaaaaagaattatttta
aagtgaagaaatattattttttaggCTCTCACAGCAATCTTTATAAGTTC
TTTTTAAAGTAATTCCAAAGCCATTCCAAATTTTGTCTTTATTCTCGATC
TGAAATCTGCACAGAATTAAATCTGCATTTTCCCCCTTTAAATTGAATCG
AAAATATAGCAATTCAACAAATGCACGGAACTTATGAAATACTGTAGACT
AATATAAAACTTGTTTATGATAAATCTGCCACCTCAAAGAAATTCGTTCT
ACGTAATCCACATCAACGCAAGCATAACCAGGAGCTACGGAGGAACTTTG
CCAATGATAGAATGAGAGGATATCAAACTAGCTCGCTTTATTACCGAGGA
ATCAATGCATGGAATAGTTTAGGCGTCAAGGTCGTGAATGCCCCATCTGT
CAGTATGTTAAAGAAAGAACTTGCAATGGAATGAGAAAATAAgctttata
aatataaaagGTTGTGTCATAGAGGTCAGTAGACCTGagaagaatatttt
tataaataaataaataaatgattttttagaaaaagatggaTCAGCAAGCT
CTTCTGAAGCGTTCGAATCATCAAGTACCGAAGCTTTCGAATCATCAAGT
ACCGAAGCTTTCGAATCATTAAGTACTGAAGCTTTTGAAATTACGCCCAC
ACCCACCCTGGATAGTGATGGCATGACATCCACCTATCAGTATATGGAGC
AGACGTCAACTTTAAATATCGAACCAACGCCTTCAGCCAGTATTGTAACA
CCCTCTTCGTCTGTCAGTGGCGGGGGCGGTGGTGACAGAGGTAAGGCTAT
TTGAttatttcagaaaaattatCCCCTCAAGTAAGAACActttagatttc
aaaattttaagctcCACGTTCTTTAATGGAGGTAAGTTTTTTTacctacc
cagctggcacacaacgttatttcaacgttcatctatcgttatatggacgt
tgtgaatgttataaaaacgttgaaacaacgttgtgggcCTGATGGGTATT
CTTCGCCAcggaaaattattattattatcgaACAATAAATCATATCATTT
CGACAGGGAAAACAAACACTTAGCTTAacggttttatttttacaaatgtg
tttccgtttcatatcagatgcatatttcatatcaggacagtgtgttgcta
ttgttatattatgctgatataagcataagaatgtttttcttttcctcttt
ctgaccaatcttgctccacatacgtgtcaatccaatgtgaaaaagcttgt
caattataattgatgagtaagcaaacgatatatgactcttatttaaaaac
aaaacttttttaataacTGACTTGAAGATTTTCACGCAAAATTAAACTTT
GGTGTTCTGTCTTCACCCAAACCAgctatcaggggggggggtcagggtcA
GAATTCGCCGGAAATTCGGCCGTCGAAATAGTTGATCGGTCGGCGGAATA
GTCGTCCGACCGGCGGAAATGTTATCCGGCCGGCGCAAAATTGGCCGTCG
GAATAGTCATCCGGCCCGCGGAAAACTGGCCGTCGGAAAAGTTATCTGGT
CCGCggatttcgagttattttttttgagtcatcttttttcgagttatatt
tttgatttatgaaaaaCCGAGTTGTTGTGTCCTTTCTCTTAATTTTTGGC
TTGATTCTAACCTCGTAAACAATCTGGTAATCAGTTTAAGCCTTAAGCTT
AACTTTAAAATATAGGAACCGAGTAAGTtatgaaataataataatttggt
ttttcataactcaaaaaaataactcgaagaAATAACTCGACTTCGATTTC
CACGGACCGGACAACTTttccgacggccaattttccgcgGGCTGGATGAC
TATTTCGGCGGCCGGGTAACTGTTATGACGGCCGGATGACTATTTCGACG
GCCAATTTTGCGCCGGCCGGATAATATTTCCGCCGGCCGAACGACTATTC
CGCCGACCGATCAACTTTTTCGACGGTCGAATTTCCGGCGAATTCTGACC
TTGAACCCCCCtgatacccagctggcacagaaCGTCGTAacaacgtccat
ctaatgttcGTAATgctcatataacgttagatgaacgttgaaacaacatt
gtttgCCAGCTGGGCTGTACATAATTATAGCAGCAAAGTTGACGAATACC
ACGACCTCTCTTATTTAAAACTACGGCCTAATATTTTGAAGGTGAAAATT
TATTATGAAATTATTATATAAACCGTGGACTTTCCTAAGTCACTAGAGAA
TAGTTTCTGCATAAATCCGTTTTGAATTTTAGGAAAGATTAgcacagtca
actctctctaactcgaacctctgcttttcaaatttttgtataattcGAAT
TTGAATCTCGGTccccctcagctggaaaatCGCATTAAATACTCTCCGTA
ATCCGAATTTTTGTACAACTCGAAGATTGGCGAGTTAGAGAGGGAGTCAA
CTGTATAaaagtttccaattttttctgcTGTCTTCAAAACTCTCCATCCC
TCTCGGGCTTTTTTTCAGTTGAAAGACGCAATTGGATTTACAGAAtacga
agagaaaaaaaagaattttaaacagcattttatcataatttgcaCTGTAA
TTAGAGGAAAATATCTATCATGCtcaattagaaaaaataaacccagctga
cacacaacgttgtttcaacgtttatttaacgttcacaacgtccatgtaac
gttagatgaacgttgaaacaacgttgtgtgccagctgggaaaggtGCCCA
TGCTAATATTTCTAGGAAATTGAGTTTGTCTAAATTTTAGCAAATTTCAC
AATTTTCTCACATCACAGCGTGCAGGTTGGATAATGTGACGGTGACGGCA
AAAAGAGTGAATGCGCAAATATGCATTCAAAAAGCATCCAACCCCGACAA
TTATCTTATTCCAATTTTAAAGACCTTCCCTCAAGCCGCCAAATATTGTG
GTGAATTACAAGGAGAGTTATTACAATTTCCATCGCAAGCTGCTTACGAT
ATTTTGGCTGACTTTATTACGGCAGACGAAgacttgaaaaatattggaaC
GGTGCACTTAGGTGGTCACGATTTTGGTGTTGAAGGCCAAGTTCTATGGT
TAGATGGTAAG

Coding sequence (CDS) from alignment at scaffold_116:710879..716789+

>TCONS_00046672 ID=TCONS_00046672|Name=TCONS_00046672|organism=Clytia hemisphaerica|type=CDS|length=5475bp|location=Sequence derived from alignment at scaffold_116:710879..716789+ (Clytia hemisphaerica)
GAGGAACTAGGGGATGATCAGTCATCTCGCTGGCAGGACTCCAAAGTGGA
CAGATGTTTATATTTTATGCCAGGAAATTTAGATCCTCCTAAATACGGAT
TTGACCTTGATGACTGCTCTGAGGATTATGCTCTTATTGGCACAGAGAAA
AAGAATGGAGCTTGTGGAGGTGGAAGTAGCAGCCCACCCAAAGTTGGTGA
TCATTGTATCAGTGTCTTAGACTCTGGGACCAATTCGGGCAGGGACTTTA
ATGCTATGTTTCCAGATAAGGAAATATTCATGGCAGAAAGTCAAGCAAAT
AGAATGCCCCAAAGTACGATTGATGCAATAACACAAAGTGACGTTGGTGG
CAATGATAAAATCTGGACCCCTTTCATTTGGTCTGACACTCGCGCATGGC
TAACTTAtgGTGATGTTTATGTAGAACCACCGGATGATTTTTTCTACGAA
GAAGATTGGGAATGCCTCGTTTTGGAATCAAATAAAAAGTTAAGGCCAGA
AACGTGCAGCGGTGTTTCTTATGATACACTTTGCTTTTATGaaaaagatg
gaTCAGCAAGCTCTTCTGAAGCGTTCGAATCATCAAGTACCGAAGCTTTC
GAATCATCAAGTACCGAAGCTTTCGAATCATTAAGTACTGAAGCTTTTGA
AATTACGCCCACACCCACCCTGGATAGTGATGGCATGACATCCACCTATC
AGTATATGGAGCAGACGTCAACTTTAAATATCGAACCAACGCCTTCAGCC
AGTATTGTAACACCCTCTTCGTCTGTCAGTGGCGGGGGCGGTGGTGACAG
AGCGTGCAGGTTGGATAATGTGACGGTGACGGCAAAAAGAGTGAATGCGC
AAATATGCATTCAAAAAGCATCCAACCCCGACAATTATCTTATTCCAATT
TTAAAGACCTTCCCTCAAGCCGCCAAATATTGTGGTGAATTACAAGGAGA
GTTATTACAATTTCCATCGCAAGCTGCTTACGATATTTTGGCTGACTTTA
TTACGGCAGACGAAgacttgaaaaatattggaaCGGTGCACTTAGGTGGT
CACGATTTTGGTGTTGAAGGCCAAGTTCTATGGTTAGATGGTAAGGAGGA
ACTAGGGGATGATCAGTCATCTCGCTGGCAGGACTCCAAAGTGGACAGAT
GTTTATATTTTATGCCAGGAAATTTAGATCCTCCTAAATACGGATTTGAC
CTTGATGACTGCTCTGAGGATTATGCTCTTATTGGCACAGAGAAAAAGAA
TGGAGCTTGTGGAGGTGGAAGTAGCAGCCCACCCAAAGTTGGTGATCATT
GTATCAGTGTCTTAGACTCTGGGACCAATTCGGGCAGGGACTTTAATGCT
ATGTTTCCAGATAAGGAAATATTCATGGCAGAAAGTCAAGCAAATAGAAT
GCCCCAAAGTACGATTGATGCAATAACACAAAGTGACGTTGGTGGCAATG
ATAAAATCTGGACCCCTTTCATTTGGTCTGACACTCGCGCATGGCTAACT
TAtgGTGATGTTTATGTAGAACCACCGGATGATTTTTTCTACGAAGAAGA
TTGGGAATGCCTCGTTTTGGAATCAAATAAAAAGTTAAGGCCAGAAACGT
GCAGCGGTGTTTCTTATGATACACTTTGCTTTTATGaaaaagatggaTCA
GCAAGCTCTTCTGAAGCGTTCGAATCATCAAGTACCGAAGCTTTCGAATC
ATCAAGTACCGAAGCTTTCGAATCATTAAGTACTGAAGCTTTTGAAATTA
CGCCCACACCCACCCTGGATAGTGATGGCATGACATCCACCTATCAGTAT
ATGGAGCAGACGTCAACTTTAAATATCGAACCAACGCCTTCAGCCAGTAT
TGTAACACCCTCTTCGTCTGTCAGTGGCGGGGGCGGTGGTGACAGAGCGT
GCAGGTTGGATAATGTGACGGTGACGGCAAAAAGAGTGAATGCGCAAATA
TGCATTCAAAAAGCATCCAACCCCGACAATTATCTTATTCCAATTTTAAA
GACCTTCCCTCAAGCCGCCAAATATTGTGGTGAATTACAAGGAGAGTTAT
TACAATTTCCATCGCAAGCTGCTTACGATATTTTGGCTGACTTTATTACG
GCAGACGAAgacttgaaaaatattggaaCGGTGCACTTAGGTGGTCACGA
TTTTGGTGTTGAAGGCCAAGTTCTATGGTTAGATGGTAAGGAGGAACTAG
GGGATGATCAGTCATCTCGCTGGCAGGACTCCAAAGTGGACAGATGTTTA
TATTTTATGCCAGGAAATTTAGATCCTCCTAAATACGGATTTGACCTTGA
TGACTGCTCTGAGGATTATGCTCTTATTGGCACAGAGAAAAAGAATGGAG
CTTGTGGAGGTGGAAGTAGCAGCCCACCCAAAGTTGGTGATCATTGTATC
AGTGTCTTAGACTCTGGGACCAATTCGGGCAGGGACTTTAATGCTATGTT
TCCAGATAAGGAAATATTCATGGCAGAAAGTCAAGCAAATAGAATGCCCC
AAAGTACGATTGATGCAATAACACAAAGTGACGTTGGTGGCAATGATAAA
ATCTGGACCCCTTTCATTTGGTCTGACACTCGCGCATGGCTAACTTAtgG
TGATGTTTATGTAGAACCACCGGATGATTTTTTCTACGAAGAAGATTGGG
AATGCCTCGTTTTGGAATCAAATAAAAAGTTAAGGCCAGAAACGTGCAGC
GGTGTTTCTTATGATACACTTTGCTTTTATGaaaaagatggaTCAGCAAG
CTCTTCTGAAGCGTTCGAATCATCAAGTACCGAAGCTTTCGAATCATCAA
GTACCGAAGCTTTCGAATCATTAAGTACTGAAGCTTTTGAAATTACGCCC
ACACCCACCCTGGATAGTGATGGCATGACATCCACCTATCAGTATATGGA
GCAGACGTCAACTTTAAATATCGAACCAACGCCTTCAGCCAGTATTGTAA
CACCCTCTTCGTCTGTCAGTGGCGGGGGCGGTGGTGACAGAGCGTGCAGG
TTGGATAATGTGACGGTGACGGCAAAAAGAGTGAATGCGCAAATATGCAT
TCAAAAAGCATCCAACCCCGACAATTATCTTATTCCAATTTTAAAGACCT
TCCCTCAAGCCGCCAAATATTGTGGTGAATTACAAGGAGAGTTATTACAA
TTTCCATCGCAAGCTGCTTACGATATTTTGGCTGACTTTATTACGGCAGA
CGAAgacttgaaaaatattggaaCGGTGCACTTAGGTGGTCACGATTTTG
GTGTTGAAGGCCAAGTTCTATGGTTAGATGGTAAGGAGGAACTAGGGGAT
GATCAGTCATCTCGCTGGCAGGACTCCAAAGTGGACAGATGTTTATATTT
TATGCCAGGAAATTTAGATCCTCCTAAATACGGATTTGACCTTGATGACT
GCTCTGAGGATTATGCTCTTATTGGCACAGAGAAAAAGAATGGAGCTTGT
GGAGGTGGAAGTAGCAGCCCACCCAAAGTTGGTGATCATTGTATCAGTGT
CTTAGACTCTGGGACCAATTCGGGCAGGGACTTTAATGCTATGTTTCCAG
ATAAGGAAATATTCATGGCAGAAAGTCAAGCAAATAGAATGCCCCAAAGT
ACGATTGATGCAATAACACAAAGTGACGTTGGTGGCAATGATAAAATCTG
GACCCCTTTCATTTGGTCTGACACTCGCGCATGGCTAACTTAtgGTGATG
TTTATGTAGAACCACCGGATGATTTTTTCTACGAAGAAGATTGGGAATGC
CTCGTTTTGGAATCAAATAAAAAGTTAAGGCCAGAAACGTGCAGCGGTGT
TTCTTATGATACACTTTGCTTTTATGaaaaagatggaTCAGCAAGCTCTT
CTGAAGCGTTCGAATCATCAAGTACCGAAGCTTTCGAATCATCAAGTACC
GAAGCTTTCGAATCATTAAGTACTGAAGCTTTTGAAATTACGCCCACACC
CACCCTGGATAGTGATGGCATGACATCCACCTATCAGTATATGGAGCAGA
CGTCAACTTTAAATATCGAACCAACGCCTTCAGCCAGTATTGTAACACCC
TCTTCGTCTGTCAGTGGCGGGGGCGGTGGTGACAGAGCGTGCAGGTTGGA
TAATGTGACGGTGACGGCAAAAAGAGTGAATGCGCAAATATGCATTCAAA
AAGCATCCAACCCCGACAATTATCTTATTCCAATTTTAAAGACCTTCCCT
CAAGCCGCCAAATATTGTGGTGAATTACAAGGAGAGTTATTACAATTTCC
ATCGCAAGCTGCTTACGATATTTTGGCTGACTTTATTACGGCAGACGAAg
acttgaaaaatattggaaCGGTGCACTTAGGTGGTCACGATTTTGGTGTT
GAAGGCCAAGTTCTATGGTTAGATGGTAAGGAGGAACTAGGGGATGATCA
GTCATCTCGCTGGCAGGACTCCAAAGTGGACAGATGTTTATATTTTATGC
CAGGAAATTTAGATCCTCCTAAATACGGATTTGACCTTGATGACTGCTCT
GAGGATTATGCTCTTATTGGCACAGAGAAAAAGAATGGAGCTTGTGGAGG
TGGAAGTAGCAGCCCACCCAAAGTTGGTGATCATTGTATCAGTGTCTTAG
ACTCTGGGACCAATTCGGGCAGGGACTTTAATGCTATGTTTCCAGATAAG
GAAATATTCATGGCAGAAAGTCAAGCAAATAGAATGCCCCAAAGTACGAT
TGATGCAATAACACAAAGTGACGTTGGTGGCAATGATAAAATCTGGACCC
CTTTCATTTGGTCTGACACTCGCGCATGGCTAACTTAtgGTGATGTTTAT
GTAGAACCACCGGATGATTTTTTCTACGAAGAAGATTGGGAATGCCTCGT
TTTGGAATCAAATAAAAAGTTAAGGCCAGAAACGTGCAGCGGTGTTTCTT
ATGATACACTTTGCTTTTATGaaaaagatggaTCAGCAAGCTCTTCTGAA
GCGTTCGAATCATCAAGTACCGAAGCTTTCGAATCATCAAGTACCGAAGC
TTTCGAATCATTAAGTACTGAAGCTTTTGAAATTACGCCCACACCCACCC
TGGATAGTGATGGCATGACATCCACCTATCAGTATATGGAGCAGACGTCA
ACTTTAAATATCGAACCAACGCCTTCAGCCAGTATTGTAACACCCTCTTC
GTCTGTCAGTGGCGGGGGCGGTGGTGACAGAGCGTGCAGGTTGGATAATG
TGACGGTGACGGCAAAAAGAGTGAATGCGCAAATATGCATTCAAAAAGCA
TCCAACCCCGACAATTATCTTATTCCAATTTTAAAGACCTTCCCTCAAGC
CGCCAAATATTGTGGTGAATTACAAGGAGAGTTATTACAATTTCCATCGC
AAGCTGCTTACGATATTTTGGCTGACTTTATTACGGCAGACGAAgacttg
aaaaatattggaaCGGTGCACTTAGGTGGTCACGATTTTGGTGTTGAAGG
CCAAGTTCTATGGTTAGATGGTAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_029785XLOC_029785Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00046672-proteinTCONS_00046672-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00046672-exon-scaffold_116-1491911889:710879..711038TCONS_00046672-exon-scaffold_116-1491911889:710879..711038Clytia hemisphaericaexon
TCONS_00046672-exon-scaffold_116-1510915933:710879..711038TCONS_00046672-exon-scaffold_116-1510915933:710879..711038Clytia hemisphaericaexon
TCONS_00046672-exon-scaffold_116-1575043694:710879..711038TCONS_00046672-exon-scaffold_116-1575043694:710879..711038Clytia hemisphaericaexon
TCONS_00046672-exon-scaffold_116-1491911889:711286..711534TCONS_00046672-exon-scaffold_116-1491911889:711286..711534Clytia hemisphaericaexon
TCONS_00046672-exon-scaffold_116-1510915933:711286..711534TCONS_00046672-exon-scaffold_116-1510915933:711286..711534Clytia hemisphaericaexon
TCONS_00046672-exon-scaffold_116-1575043694:711286..711534TCONS_00046672-exon-scaffold_116-1575043694:711286..711534Clytia hemisphaericaexon
TCONS_00046672-exon-scaffold_116-1491911889:713228..713359TCONS_00046672-exon-scaffold_116-1491911889:713228..713359Clytia hemisphaericaexon
TCONS_00046672-exon-scaffold_116-1510915933:713228..713359TCONS_00046672-exon-scaffold_116-1510915933:713228..713359Clytia hemisphaericaexon
TCONS_00046672-exon-scaffold_116-1575043694:713228..713359TCONS_00046672-exon-scaffold_116-1575043694:713228..713359Clytia hemisphaericaexon
TCONS_00046672-exon-scaffold_116-1491911889:714208..714468TCONS_00046672-exon-scaffold_116-1491911889:714208..714468Clytia hemisphaericaexon
TCONS_00046672-exon-scaffold_116-1510915933:714208..714468TCONS_00046672-exon-scaffold_116-1510915933:714208..714468Clytia hemisphaericaexon
TCONS_00046672-exon-scaffold_116-1575043694:714208..714468TCONS_00046672-exon-scaffold_116-1575043694:714208..714468Clytia hemisphaericaexon
TCONS_00046672-exon-scaffold_116-1491911889:716497..716789TCONS_00046672-exon-scaffold_116-1491911889:716497..716789Clytia hemisphaericaexon
TCONS_00046672-exon-scaffold_116-1510915933:716497..716789TCONS_00046672-exon-scaffold_116-1510915933:716497..716789Clytia hemisphaericaexon
TCONS_00046672-exon-scaffold_116-1575043694:716497..716789TCONS_00046672-exon-scaffold_116-1575043694:716497..716789Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_116supercontigscaffold_116:710879..716789 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.24132	0.937148	0.317368	0.266139	0.323998	0.256028	0.617773	0.530156	1.07978	1.1285	1.29819	1.44008	3.78161	2.40613	0.682125	1.46405	0.991974	0.739449	7.91731	12.0265	1.0066	0.906434	0.596857	0.876555	1.89165	1.9952	0.768689	0.585975	0.53333	0.452816
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR016186C-type_lectin-like/link
IPR016187CTDL_fold
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00046672 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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