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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00046779 ID=TCONS_00046779|Name=TCONS_00046779|organism=Clytia hemisphaerica|type=transcript|length=968bp
GCGAAATTGGCAACCTTACGGATTGCGTTTACTTTCATAAGTCAGGGTTA
CTTTAATCTCTTCCAAATGACAGACTATTCTTTGAGCTCTCAATTTATAA
AAAATGGAAGTGTTAACTTAAGTTTTTATTCTAACTTTAATttatagtca
tctggggtagTTACAGGACAGTTAAAATAAAGGGGTAAATATGGGACACC
CCTAAAAACCGTGACTGttaaaattattataaatttggaTTTCAGATGGA
TGGGATTTTGGAGTCATTCTAGCTACTAGAAAACTGTCTAGTAAGATTAT
TCTAAcatatacttttgatgtttcAACACAAGTTTAAACATGTGTGacca
taaaaatcaattttcgtagTTTTAGAGGGAACTTTTCAAGCTTTAGTGTC
AGGAAGAGTTGTAATCACTTTGATTAATATACATAAATCACAGGTGAGAA
AAGTCTATGCTCTAGCCTTTCTATATTTGCATAAGACAATGATGCCTAAT
CTTGCAAATTATGTTGTTTGGAGGTGATGAAAGTAATTACCCCTTCCTTA
TAAAAGTGACCAGCTAATTGACAATACTTGTATTCATATCTCTAAACATG
TTTTAATAAAGTTAAGTTAAAAAGTCAGATTATAGAATAACACAATTGCA
TATAACAAGAAGTGATATGTCTGCCCTACCTTCATCAGAATCAAAAGATG
GCAAACAAGCTGGTTATGCTAATGGATTAGATTTGTAAGCATGCATTTTT
ATGACGTGATGTTCTCCTTGCTACaataccttttcatttttttattacct
ACTTAGATTTCTATTCCATTTTTGTCTAACAAAATTGACATACCTTTATG
GGGCCTAATTCGTTTAGAAAACTTTCCCTTCCTTTTCTTAACAGTCTTTT
AGTTTTATCAAGTTGGGATGACTGTCTAAAATCAGattgaaataattttg
taattatttgcttttttt Run BLAST on NCBI transcript from alignment at scaffold_117:423085..424052+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00046779 ID=TCONS_00046779|Name=TCONS_00046779|organism=Clytia hemisphaerica|type=transcript|length=968bp|location=Sequence derived from alignment at scaffold_117:423085..424052+ (Clytia hemisphaerica)
GCGAAATTGGCAACCTTACGGATTGCGTTTACTTTCATAAGTCAGGGTTA
CTTTAATCTCTTCCAAATGACAGACTATTCTTTGAGCTCTCAATTTATAA
AAAATGGAAGTGTTAACTTAAGTTTTTATTCTAACTTTAATttatagtca
tctggggtagTTACAGGACAGTTAAAATAAAGGGGTAAATATGGGACACC
CCTAAAAACCGTGACTGttaaaattattataaatttggaTTTCAGATGGA
TGGGATTTTGGAGTCATTCTAGCTACTAGAAAACTGTCTAGTAAGATTAT
TCTAAcatatacttttgatgtttcAACACAAGTTTAAACATGTGTGacca
taaaaatcaattttcgtagTTTTAGAGGGAACTTTTCAAGCTTTAGTGTC
AGGAAGAGTTGTAATCACTTTGATTAATATACATAAATCACAGGTGAGAA
AAGTCTATGCTCTAGCCTTTCTATATTTGCATAAGACAATGATGCCTAAT
CTTGCAAATTATGTTGTTTGGAGGTGATGAAAGTAATTACCCCTTCCTTA
TAAAAGTGACCAGCTAATTGACAATACTTGTATTCATATCTCTAAACATG
TTTTAATAAAGTTAAGTTAAAAAGTCAGATTATAGAATAACACAATTGCA
TATAACAAGAAGTGATATGTCTGCCCTACCTTCATCAGAATCAAAAGATG
GCAAACAAGCTGGTTATGCTAATGGATTAGATTTGTAAGCATGCATTTTT
ATGACGTGATGTTCTCCTTGCTACaataccttttcatttttttattacct
ACTTAGATTTCTATTCCATTTTTGTCTAACAAAATTGACATACCTTTATG
GGGCCTAATTCGTTTAGAAAACTTTCCCTTCCTTTTCTTAACAGTCTTTT
AGTTTTATCAAGTTGGGATGACTGTCTAAAATCAGattgaaataattttg
taattatttgcttttttt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00046779-exon-scaffold_117-1491911889:423085..424052 | TCONS_00046779-exon-scaffold_117-1491911889:423085..424052 | Clytia hemisphaerica | exon |
| TCONS_00046779-exon-scaffold_117-1510915933:423085..424052 | TCONS_00046779-exon-scaffold_117-1510915933:423085..424052 | Clytia hemisphaerica | exon |
| TCONS_00046779-exon-scaffold_117-1575043694:423085..424052 | TCONS_00046779-exon-scaffold_117-1575043694:423085..424052 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_117 | supercontig | scaffold_117:423085..424052 + |
Blast
The following BLAST results are available for this feature:
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