XLOC_029852 (gene) - C. hemisphaerica

Overview
NameXLOC_029852
Unique NameXLOC_029852
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_117:423085..426342+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_029852 ID=XLOC_029852|Name=XLOC_029852|organism=Clytia hemisphaerica|type=gene|length=3258bp|location=Sequence derived from alignment at scaffold_117:423085..426342+ (Clytia hemisphaerica)
GCGAAATTGGCAACCTTACGGATTGCGTTTACTTTCATAAGTCAGGGTTA
CTTTAATCTCTTCCAAATGACAGACTATTCTTTGAGCTCTCAATTTATAA
AAAATGGAAGTGTTAACTTAAGTTTTTATTCTAACTTTAATttatagtca
tctggggtagTTACAGGACAGTTAAAATAAAGGGGTAAATATGGGACACC
CCTAAAAACCGTGACTGttaaaattattataaatttggaTTTCAGATGGA
TGGGATTTTGGAGTCATTCTAGCTACTAGAAAACTGTCTAGTAAGATTAT
TCTAAcatatacttttgatgtttcAACACAAGTTTAAACATGTGTGacca
taaaaatcaattttcgtagTTTTAGAGGGAACTTTTCAAGCTTTAGTGTC
AGGAAGAGTTGTAATCACTTTGATTAATATACATAAATCACAGGTGAGAA
AAGTCTATGCTCTAGCCTTTCTATATTTGCATAAGACAATGATGCCTAAT
CTTGCAAATTATGTTGTTTGGAGGTGATGAAAGTAATTACCCCTTCCTTA
TAAAAGTGACCAGCTAATTGACAATACTTGTATTCATATCTCTAAACATG
TTTTAATAAAGTTAAGTTAAAAAGTCAGATTATAGAATAACACAATTGCA
TATAACAAGAAGTGATATGTCTGCCCTACCTTCATCAGAATCAAAAGATG
GCAAACAAGCTGGTTATGCTAATGGATTAGATTTGTAAGCATGCATTTTT
ATGACGTGATGTTCTCCTTGCTACaataccttttcatttttttattacct
ACTTAGATTTCTATTCCATTTTTGTCTAACAAAATTGACATACCTTTATG
GGGCCTAATTCGTTTAGAAAACTTTCCCTTCCTTTTCTTAACAGTCTTTT
AGTTTTATCAAGTTGGGATGACTGTCTAAAATCAGattgaaataattttg
taattatttgcttttttttttaatgtaattttaatgtttgaaatgaaaat
ctatcaaaatatatatatattttttctttttagccttTCTCATCATTATG
AAATTGACAACTCTGCCACCAGGCTGAAAATTAGTGAAATATATGAACAC
TTTTGCCAGTCTTTCCCAAACACTTCTTTGAAAGCATTTGGTTCTACAGT
CAAAAAAGCATTTccatttattgaaaagaaaaattccaATGGCTGTGCAT
ATTATACAAATATCAAAAGACATGTTGTTAAAGGTTTGTCATCATTCGAT
AAGACTTTTCTATTGAAAGATCTTGAAAAATGGTATTTAACCACGCATCT
AGCATAATTTTGAAGCTAATGATAGCCTTACTTAAAATGGGaccaaatct
tcaaaaaatttcttcaaactttgtcttttgtttgtacTGTAGAACAGTTT
AGGTACTCCACCCaacactgtttttttttgtctcatTAACATTAGAAACT
TTTCAGCATGAGCATGTCATATTGgtcctattttttttttttttcaatta
agaTTATGGTAATCAAACCAGATACAGGAGGAtgtcttttgttaaaaaag
attttttaaatttatcaactgcttcaaacttttttctgtAATTTGTTTAA
TGTTTCAGACGTTCTTGGGCCCTGCAAACAGTTAAACGTGACTTCCAATG
TTTTATGATTTTCCTTCACCATGATGGAAATCTCCAGTAGATTACTCATT
TACCCAAATCTATGACTTGTTTTCATTAATATCAGATGATGATTTTTCCC
TGTTTCTCATAAAAGCCTTTTAGATTTCAAGTTCTAAATACACAGGTCTT
CGGTTGCATTTTAATCAAACCAACTTGGTTTATTATTGGCTTAGACATGG
acgtttttgaaaattatatgtTTGTGTACAATGTTTTTAGCCAATAACCC
TTATCAAGTTGGTTTGTTTACATGCGATTTTCAtgactttttaacaaaaa
atagctaacaggaaacccgtgtattatcatcaaaaaattctctaatatat
taagcaaaaaatagtaaTGGCAATAGCATCCAAATAAATAGGCAAGAAAC
TTGCTTGATTTTGTTGCCTACTCAACAATTATCAGACCATTTTTATGCCT
TTTTAAAGAGTCTGGTTATCAGATTAacaaaaattatgcaaaaacaGCCA
CaagaataataataaaaacAGTCTTTCTAGAATATCCCCTGATTACAAAT
GAATTTAAGGTAATTGTAATGCCAAAGTACTAACGAGACAAGATTACTAA
ATGATGGATACATGAAtttagaaatataatttttattaacaGCTACAACA
CCTGATGAGAACCCTGATAGCTCAATGCCAGATTTGCCAAAATGTATGTT
CTTGGACAAAAAGTTGTTTTCCGTTAACAAGCGCCATGTTATGGATGGAG
CAACATCTTCTGTCTTCTTTGGGAAATATAATGAAACACAAGTTTGCATT
AAACAATATAAACCAAATGTTGAAGTTCATGAAGTTTATAATGAAGCACA
GATACTTTTATCACTTCCAGCATCAGAATATCTATGTTTTTTGGTGGGAG
TTTGTTTAGAGAGGCCACAACGATTGGTTACCAGTTTCTTCGGTTCAGAT
TTTCCAGCAAGGAACACTTTGGACTACCATATTAAAAGCAAAACTGTCTC
TATTGCCAATACATTTTTTATCATAAGAAAGCTACTTGATGCAGTAAGCT
TTcttcacaaaaataatgtttttcacGGAGATATTAAACCTAACAATTTA
TTGGTTTTATTTGTCGATACGTTGAAGCTAAGGGTTATCGATTTTGGATG
CAGTTCTTTCATTAGTGAGAGAGAAAATAAGATTTACAATGGTATCCTAG
AAGAAGAGAAGGAATCAATCTCTTTATTAATCAAATGCAACAAGCATATT
GCGCCTGAGGTACATTATGGCTATCCAAGAAGCAGCCTAACTGACATATA
TGGTATTGGCTACACatcaaaaaaactcatttcaGTCAATCAAAGTATAA
CAACAAACAATAATAAGAGACTTTTTTCCCTAATACAAAAATGTTTACAA
TTAGATCCTTATAAAAGGCCTAGCATCCTTGAATTGCAAAGTGCCTTGTA
AGTGAATTAAACTGAatcaaatgattaaaaaaaccaCTGCAttacaaaga
aatatttttcatttttgacaaatttaacGAATCATTTCATTTCGTTCACT
TTTTGGTTTGGCATGGTtgtgcatttttctttttatatttttgcttgGTA
TATGCTTG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00046779TCONS_00046779Clytia hemisphaericatranscript
TCONS_00046780TCONS_00046780Clytia hemisphaericatranscript
TCONS_00046781TCONS_00046781Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00046780-proteinTCONS_00046780-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_117supercontigscaffold_117:423085..426342 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0.05	0	1.16	1.33	0.91	0.51	0.11	0.26	0.14	0.24	0.22	0.25	0.03	0.03	0	0.04	0	0	0.05	0	0	0	0.78	1.58	0	0	0.05	0