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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00046781 ID=TCONS_00046781|Name=TCONS_00046781|organism=Clytia hemisphaerica|type=transcript|length=1206bp
GCTTGATTTTGTTGCCTACTCAACAATTATCAGACCATTTTTATGCCTTT
TTAAAGAGTCTGGTTATCAGATTAacaaaaattatgcaaaaacaGCCACa
agaataataataaaaacAGTCTTTCTAGAATATCCCCTGATTACAAATGA
ATTTAAGGTAATTGTAATGCCAAAGTACTAACGAGACAAGATTACTAAAT
GATGGATACATGAAtttagaaatataatttttattaacaGCTACAACACC
TGATGAGAACCCTGATAGCTCAATGCCAGATTTGCCAAAATGTATGTTCT
TGGACAAAAAGTTGTTTTCCGTTAACAAGCGCCATGTTATGGATGGAGCA
ACATCTTCTGTCTTCTTTGGGAAATATAATGAAACACAAGTTTGCATTAA
ACAATATAAACCAAATGTTGAAGTTCATGAAGTTTATAATGAAGCACAGA
TACTTTTATCACTTCCAGCATCAGAATATCTATGTTTTTTGGTGGGAGTT
TGTTTAGAGAGGCCACAACGATTGGTTACCAGTTTCTTCGGTTCAGATTT
TCCAGCAAGGAACACTTTGGACTACCATATTAAAAGCAAAACTGTCTCTA
TTGCCAATACATTTTTTATCATAAGAAAGCTACTTGATGCAGTAAGCTTT
cttcacaaaaataatgtttttcacGGAGATATTAAACCTAACAATTTATT
GGTTTTATTTGTCGATACGTTGAAGCTAAGGGTTATCGATTTTGGATGCA
GTTCTTTCATTAGTGAGAGAGAAAATAAGATTTACAATGGTATCCTAGAA
GAAGAGAAGGAATCAATCTCTTTATTAATCAAATGCAACAAGCATATTGC
GCCTGAGGTACATTATGGCTATCCAAGAAGCAGCCTAACTGACATATATG
GTATTGGCTACACatcaaaaaaactcatttcaGTCAATCAAAGTATAACA
ACAAACAATAATAAGAGACTTTTTTCCCTAATACAAAAATGTTTACAATT
AGATCCTTATAAAAGGCCTAGCATCCTTGAATTGCAAAGTGCCTTGTAAG
TGAATTAAACTGAatcaaatgattaaaaaaaccaCTGCAttacaaagaaa
tatttttcatttttgacaaatttaacGAATCATTTCATTTCGTTCACTTT
TTGGTTTGGCATGGTtgtgcatttttctttttatatttttgcttgGTATA
TGCTTG Run BLAST on NCBI transcript from alignment at scaffold_117:425137..426342+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00046781 ID=TCONS_00046781|Name=TCONS_00046781|organism=Clytia hemisphaerica|type=transcript|length=1206bp|location=Sequence derived from alignment at scaffold_117:425137..426342+ (Clytia hemisphaerica)
GCTTGATTTTGTTGCCTACTCAACAATTATCAGACCATTTTTATGCCTTT
TTAAAGAGTCTGGTTATCAGATTAacaaaaattatgcaaaaacaGCCACa
agaataataataaaaacAGTCTTTCTAGAATATCCCCTGATTACAAATGA
ATTTAAGGTAATTGTAATGCCAAAGTACTAACGAGACAAGATTACTAAAT
GATGGATACATGAAtttagaaatataatttttattaacaGCTACAACACC
TGATGAGAACCCTGATAGCTCAATGCCAGATTTGCCAAAATGTATGTTCT
TGGACAAAAAGTTGTTTTCCGTTAACAAGCGCCATGTTATGGATGGAGCA
ACATCTTCTGTCTTCTTTGGGAAATATAATGAAACACAAGTTTGCATTAA
ACAATATAAACCAAATGTTGAAGTTCATGAAGTTTATAATGAAGCACAGA
TACTTTTATCACTTCCAGCATCAGAATATCTATGTTTTTTGGTGGGAGTT
TGTTTAGAGAGGCCACAACGATTGGTTACCAGTTTCTTCGGTTCAGATTT
TCCAGCAAGGAACACTTTGGACTACCATATTAAAAGCAAAACTGTCTCTA
TTGCCAATACATTTTTTATCATAAGAAAGCTACTTGATGCAGTAAGCTTT
cttcacaaaaataatgtttttcacGGAGATATTAAACCTAACAATTTATT
GGTTTTATTTGTCGATACGTTGAAGCTAAGGGTTATCGATTTTGGATGCA
GTTCTTTCATTAGTGAGAGAGAAAATAAGATTTACAATGGTATCCTAGAA
GAAGAGAAGGAATCAATCTCTTTATTAATCAAATGCAACAAGCATATTGC
GCCTGAGGTACATTATGGCTATCCAAGAAGCAGCCTAACTGACATATATG
GTATTGGCTACACatcaaaaaaactcatttcaGTCAATCAAAGTATAACA
ACAAACAATAATAAGAGACTTTTTTCCCTAATACAAAAATGTTTACAATT
AGATCCTTATAAAAGGCCTAGCATCCTTGAATTGCAAAGTGCCTTGTAAG
TGAATTAAACTGAatcaaatgattaaaaaaaccaCTGCAttacaaagaaa
tatttttcatttttgacaaatttaacGAATCATTTCATTTCGTTCACTTT
TTGGTTTGGCATGGTtgtgcatttttctttttatatttttgcttgGTATA
TGCTTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00046781-exon-scaffold_117-1491911889:425137..426342 | TCONS_00046781-exon-scaffold_117-1491911889:425137..426342 | Clytia hemisphaerica | exon |
| TCONS_00046781-exon-scaffold_117-1510915933:425137..426342 | TCONS_00046781-exon-scaffold_117-1510915933:425137..426342 | Clytia hemisphaerica | exon |
| TCONS_00046781-exon-scaffold_117-1575043694:425137..426342 | TCONS_00046781-exon-scaffold_117-1575043694:425137..426342 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_117 | supercontig | scaffold_117:425137..426342 + |
Blast
The following BLAST results are available for this feature:
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