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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00046832 ID=TCONS_00046832|Name=TCONS_00046832|organism=Clytia hemisphaerica|type=transcript|length=1044bp
gtgaaagtttgtgatgacgtcatcacctttatgatgacgtcatcaaccca
aatttttttctatgaactccttttatgatagagaacatttctgccaaatt
tcaagtccatatcttttctagatcaaaagttatgcaaggctggtggaaaa
cccccccccccccttgagaatacaaaatccgaaaaagccttaaaattcaC
CAGGGGAAATACAAAAAACGACTGAATAGGAACCCCATATATTTTTGgta
tctttttaaaatattgtaaataaaTTTAACAAGGTGACTATgttataata
ttttgaaaaatatatataatatcttttttatttcaaaatctgCAATTCTT
TTGGCTACATAAACATGttctaaaactttttaaacaaaatgtcAAGCATA
AGGGTTCTGGGAGTGAGAATACTATATTATACCGTAATACCATTAATTTT
CACGCCTTTTATGTTTGCTCACCTCTGAAAATAAGGTATTTGCACACtca
tttaatttttgagttattttcagaccttttgatgaaaaataaaggTAAAG
AGGGCAAGACATGAAATCAAAAGATTTACTCACTTTTAGTCCTTTCTTTA
CTTGACTTATTGTATTACtgtattttcttattcttgTAAATATCATATTC
TCAAAAAGCAGAAAAGAAAACTCTAACCTTAACatgttattctttttcat
ttcatcaaatGTGGgagaaatctaaaatttcataattattcATCCCCCAC
ACTTTTCTCTTAATTTTTTACTACAGTCTAAATATTTTTATAGTCGTAAT
TGAAGTGATGTTCTTCGATCTTTAAATACTAAAGAGATATAGCCGCATAG
TTAGAAGGATATCTTCAGCTATTCCTACACCCTTTTGTCACAGAACCGTT
GGGACTTCGAACCCACTGGGcaattttacgaaaatttcGCCCCGGTGGGG
AAAATTTACCCGacaatttcatccccactggcaaattgactttgatttca
tccccatttaaaATTCAACGTAAAAAAATTCATCGGGCTGTGAN Run BLAST on NCBI transcript from alignment at scaffold_117:79575..80618 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00046832 ID=TCONS_00046832|Name=TCONS_00046832|organism=Clytia hemisphaerica|type=transcript|length=1044bp|location=Sequence derived from alignment at scaffold_117:79575..80618 (Clytia hemisphaerica)
NTCACAGCCCGATGAATTTTTTTACGTTGAATtttaaatggggatgaaat
caaagtcaatttgccagtggggatgaaattgtCGGGTAAATTTTCCCCAC
CGGGGCgaaattttcgtaaaattgCCCAGTGGGTTCGAAGTCCCAACGGT
TCTGTGACAAAAGGGTGTAGGAATAGCTGAAGATATCCTTCTAACTATGC
GGCTATATCTCTTTAGTATTTAAAGATCGAAGAACATCACTTCAATTACG
ACTATAAAAATATTTAGACTGTAGTAAAAAATTAAGAGAAAAGTGTGGGG
GATgaataattatgaaattttagatttctcCCACatttgatgaaatgaaa
aagaataacatGTTAAGGTTAGAGTTTTCTTTTCTGCTTTTTGAGAATAT
GATATTTAcaagaataagaaaatacaGTAATACAATAAGTCAAGTAAAGA
AAGGACTAAAAGTGAGTAAATCTTTTGATTTCATGTCTTGCCCTCTTTAc
ctttatttttcatcaaaaggtctgaaaataactcaaaaattaaatgaGTG
TGCAAATACCTTATTTTCAGAGGTGAGCAAACATAAAAGGCGTGAAAATT
AATGGTATTACGGTATAATATAGTATTCTCACTCCCAGAACCCTTATGCT
TgacattttgtttaaaaagttttagaaCATGTTTATGTAGCCAAAAGAAT
TGcagattttgaaataaaaaagatattatatatatttttcaaaatattat
aacATAGTCACCTTGTTAAAtttatttacaatattttaaaaagatacCAA
AAATATATGGGGTTCCTATTCAGTCGTTTTTTGTATTTCCCCTGGtgaat
tttaaggctttttcggattttgtattctcaagggggggggggggttttcc
accagccttgcataacttttgatctagaaaagatatggacttgaaatttg
gcagaaatgttctctatcataaaaggagttcatagaaaaaaatttgggtt
gatgacgtcatcataaaggtgatgacgtcatcacaaactttcac
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00046832-exon-scaffold_117-1491911889:79575..80618 | TCONS_00046832-exon-scaffold_117-1491911889:79575..80618 | Clytia hemisphaerica | exon |
| TCONS_00046832-exon-scaffold_117-1510915933:79575..80618 | TCONS_00046832-exon-scaffold_117-1510915933:79575..80618 | Clytia hemisphaerica | exon |
| TCONS_00046832-exon-scaffold_117-1575043694:79575..80618 | TCONS_00046832-exon-scaffold_117-1575043694:79575..80618 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_117 | supercontig | scaffold_117:79575..80618 . |
Blast
The following BLAST results are available for this feature:
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