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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00046860 ID=TCONS_00046860|Name=TCONS_00046860|organism=Clytia hemisphaerica|type=transcript|length=948bp
CTGCTTACTGagagtccagccataaaaacaatgatagagccatgcataat
tactgtatcatgcatattgtattgattatgcatggttttatcattgtttt
tctgctggactacataattattcaacagctctttgaaaaaaggtctatta
aacaAGTTTCAAACAACGATTTGCCATCACATCTTTTTCTCCCTTTACAA
TCCCTGAAAGTGGCTGATGGAATTAGACAAGGGTTGGCGACACTAGGCAA
CCTTATGGTAAATAAGTATGAGATAAGTTATATCTAGGTATAGATACGTT
AGTTTTATATAAAAGACAGcttgatatttccaaaaagTTGTGGGTACTGT
ACTGTAATTTATGACCCTATGGtcaaatttttaattgttttccaGTTGGT
AGTGGTAAGGTATTTATTGTCCTTAATCCCTATGCTATGGTCAAGATAAT
TAACTTTCTGGCTCACAAAATGTCAACCAACAGActttttggacaaaaaa
atgATTTGTATCTTTTCCCTTCGTTCCCTAACATTTTTGATATTTATAAA
TatggaagaaattttgaaattggaaGCAAAATTTACCGAAAAAATCCCTC
TAAGTTAAGTGTTGCAAGTGTTgcttttttggcaaatttgagagaaaatt
tttcaaaagaaaggtttttatactgtacttttttggcaaaaatttgtctC
TCTCTATTATGGAGGCGCCATGATGGCTAGACTTATGGCAtgtgtgccgc
ccttaagggtaggctTTTCGGGTTCTTTCAGATGCACTGTAATAAAGGGT
TGACAACAAAAAAATGCACTGATGTAAGGGTaggaattttgagaaaaaaa
tgggCTTTTATGCactaaaacacaaaaaatcgCACTGTGTAAGGGTAGCT
TTTTACATTTTACCAAAGTTTTGCACTGTGCCACACTGATTAATGAAT Run BLAST on NCBI transcript from alignment at scaffold_117:422042..422989 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00046860 ID=TCONS_00046860|Name=TCONS_00046860|organism=Clytia hemisphaerica|type=transcript|length=948bp|location=Sequence derived from alignment at scaffold_117:422042..422989 (Clytia hemisphaerica)
ATTCATTAATCAGTGTGGCACAGTGCAAAACTTTGGTAAAATGTAAAAAG
CTACCCTTACACAGTGcgattttttgtgttttagtGCATAAAAGcccatt
tttttctcaaaattcctACCCTTACATCAGTGCATTTTTTTGTTGTCAAC
CCTTTATTACAGTGCATCTGAAAGAACCCGAAAagcctacccttaagggc
ggcacacaTGCCATAAGTCTAGCCATCATGGCGCCTCCATAATAGAGAGa
gacaaatttttgccaaaaaagtacagtataaaaacctttcttttgaaaaa
ttttctctcaaatttgccaaaaaagcAACACTTGCAACACTTAACTTAGA
GGGATTTTTTCGGTAAATTTTGCttccaatttcaaaatttcttccatATT
TATAAATATCAAAAATGTTAGGGAACGAAGGGAAAAGATACAAATcattt
ttttgtccaaaaagTCTGTTGGTTGACATTTTGTGAGCCAGAAAGTTAAT
TATCTTGACCATAGCATAGGGATTAAGGACAATAAATACCTTACCACTAC
CAACtggaaaacaattaaaaatttgaCCATAGGGTCATAAATTACAGTAC
AGTACCCACAActttttggaaatatcaagCTGTCTTTTATATAAAACTAA
CGTATCTATACCTAGATATAACTTATCTCATACTTATTTACCATAAGGTT
GCCTAGTGTCGCCAACCCTTGTCTAATTCCATCAGCCACTTTCAGGGATT
GTAAAGGGAGAAAAAGATGTGATGGCAAATCGTTGTTTGAAACTtgttta
atagaccttttttcaaagagctgttgaataattatgtagtccagcagaaa
aacaatgataaaaccatgcataatcaatacaatatgcatgatacagtaat
tatgcatggctctatcattgtttttatggctggactctCAGTAAGCAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00046860-exon-scaffold_117-1491911889:422042..422989 | TCONS_00046860-exon-scaffold_117-1491911889:422042..422989 | Clytia hemisphaerica | exon |
| TCONS_00046860-exon-scaffold_117-1510915933:422042..422989 | TCONS_00046860-exon-scaffold_117-1510915933:422042..422989 | Clytia hemisphaerica | exon |
| TCONS_00046860-exon-scaffold_117-1575043694:422042..422989 | TCONS_00046860-exon-scaffold_117-1575043694:422042..422989 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_117 | supercontig | scaffold_117:422042..422989 . |
Blast
The following BLAST results are available for this feature:
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