TCONS_00046862 (transcript) - C. hemisphaerica

Overview
NameTCONS_00046862
Unique NameTCONS_00046862
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length574

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00046862 ID=TCONS_00046862|Name=TCONS_00046862|organism=Clytia hemisphaerica|type=transcript|length=574bp
ccgcatctccgaaCCGGGTTTTAGAGAAAAAAGTGATACGGGTGGGAGAC
GAACCGGAAATTCTTTGTTGTCTGCTTTATCTGATACACCAGATGTCTAA
ATTTTCTTCCGAAACGCAAAATGTGGGGAAAGTTTCAACATATGTGGAGG
ATTTGGATTAAGCAACCTGGACTGACCATACAAAGAATTTTACGGAAAGA
GCACCAGCCgtaattttgagaaatattcgAGTCCATACCACCATCTTCAA
CCTCGACGCACATAGGACAGTTGGATCCCTTATTTGGCATTAGCAATAAT
TAATTACATCCTCTTTACAGATTCGGCGTACGTATCTGAAATTCATCGGA
GAGGAACGTTTAAAAGAAGGAGGCACTGTATTTGAGCTAATGTCTTTTTT
TAGCAAATTGTTGTGCAAATATTTATACTTTTAGCTAAAATTTTCTTCAC
TAAATTGCGAAAAATTGCATTAGAATTACTTTTAGGATTGAAAGTACGCT
TGATAATAAGCAACTTTGCCTCAAAACCAAATAAGCTTCAAAGagggaaa
cttttttgtggtgcacccggtata
Run BLAST on NCBI

transcript from alignment at scaffold_117:433724..434297

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00046862 ID=TCONS_00046862|Name=TCONS_00046862|organism=Clytia hemisphaerica|type=transcript|length=574bp|location=Sequence derived from alignment at scaffold_117:433724..434297 (Clytia hemisphaerica)
tataccgggtgcaccacaaaaaagtttccctCTTTGAAGCTTATTTGGTT
TTGAGGCAAAGTTGCTTATTATCAAGCGTACTTTCAATCCTAAAAGTAAT
TCTAATGCAATTTTTCGCAATTTAGTGAAGAAAATTTTAGCTAAAAGTAT
AAATATTTGCACAACAATTTGCTAAAAAAAGACATTAGCTCAAATACAGT
GCCTCCTTCTTTTAAACGTTCCTCTCCGATGAATTTCAGATACGTACGCC
GAATCTGTAAAGAGGATGTAATTAATTATTGCTAATGCCAAATAAGGGAT
CCAACTGTCCTATGTGCGTCGAGGTTGAAGATGGTGGTATGGACTcgaat
atttctcaaaattacGGCTGGTGCTCTTTCCGTAAAATTCTTTGTATGGT
CAGTCCAGGTTGCTTAATCCAAATCCTCCACATATGTTGAAACTTTCCCC
ACATTTTGCGTTTCGGAAGAAAATTTAGACATCTGGTGTATCAGATAAAG
CAGACAACAAAGAATTTCCGGTTCGTCTCCCACCCGTATCACTTTTTTCT
CTAAAACCCGGttcggagatgcgg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_029906XLOC_029906Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00046862-exon-scaffold_117-1491911889:433724..434297TCONS_00046862-exon-scaffold_117-1491911889:433724..434297Clytia hemisphaericaexon
TCONS_00046862-exon-scaffold_117-1510915933:433724..434297TCONS_00046862-exon-scaffold_117-1510915933:433724..434297Clytia hemisphaericaexon
TCONS_00046862-exon-scaffold_117-1575043694:433724..434297TCONS_00046862-exon-scaffold_117-1575043694:433724..434297Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_117supercontigscaffold_117:433724..434297 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00046862 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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