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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00046970 ID=TCONS_00046970|Name=TCONS_00046970|organism=Clytia hemisphaerica|type=transcript|length=824bp
tttagtaCTAGAAGTAAAAAGAAGTGAATTTCAAGCAGGAGACATGTCTT
CGTACATTTCCATAGCAAATGCTATCAAGGAGATTGAGTATTGGCTTCGA
TTAGCCACCTTACTGCATGAACCACTCAAAGAATCGCTGCTCAACATCCT
TCATAATCACTACAATCGAACCGACTATGTTGGCCTCCCATCCAACCCTA
CCTTTCTCAACGCTGAGCTACGAAAACACCAACATAGAATCAACCAAATG
CAAACTAAAAGAGTTCTTAACAAGGACCAAGTTGAACTTTTACTGCCAAC
CGGGAGTACACAAACCGATAGCTCAACCTTTGATGTTACTTTAATCATAT
TTTTGATTATCGAGTTCACAAACCTTCCTCCGCCCAGCAGAGGTTGGAAA
AAAGATCCATTATATACCGATACAAGTTTAGCAGCTTTCGTTTTACGTGC
TCGCAAATGGAGAAATGACTTACTACACGATGATCCAAAAAGTATCACTT
TGAACGATTTCAATAATCGATGGACTGAAGGCGTTAATATAATTCATGGT
CTGTTTTTTGTCAATTACGATACAAATAGACTGAAAACTATGACTTTAGA
TGTACACAACAGAACTGtatttaaatctttaaaatttttctctaaaaaga
tTATCGGAAAGCAAACCGCTCATGACACTCAACTTGCCGCCCATGACACT
CAACTTGCCGCCCATGACACTCAACTTGCCAACCATGACAATAAACTCGC
CGCCCATGGCACTCAACTTGCCACCCAAGACAATAAACTCACCGCCCATG
ACAACCAACTTACCACACAAGACA Run BLAST on NCBI transcript from alignment at scaffold_119:177145..178094+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00046970 ID=TCONS_00046970|Name=TCONS_00046970|organism=Clytia hemisphaerica|type=transcript|length=950bp|location=Sequence derived from alignment at scaffold_119:177145..178094+ (Clytia hemisphaerica)
tttagtaCTAGAAGTAAAAAGAAGTGAATTTCAAGCAGGAGACATGTCTT
CGTACATTTCCATAGCAAATGCTATCAAGGAGATTGAGTATTGGCTTCGA
TTAGCCACCTTACTGCATGAACCACTCAAAGAATCGCTGCTCAACATCCT
TCATAATCACTACAATCGAACCGACTATGTTGGCCTCCCATCCAACCCTA
CCTTTCTCAACGCTGAGCTACGAAAACACCAACATAGAATCAACCAAATG
CAAACTAAAAGAGTTCTTAACAAGGACCAAGTTGAACTTTTACTGCCAAC
CGGGAGTACACAAACCGATAGCTCAACCTTTGATGTTACTTTAATCATAT
TTTTGATTATCGAGTTCACAAACCTTCCTCCGCCCAGCAGAGGTTGGAAA
AAAGATCCATTATATACCGATACAAGTTTAGCAGCTTTCGTTTTACGTGC
TCGCAAATGGAGAAATGACTTACTACACGATGATCCAAAAAGTATCACTT
TGAACGATTTCAATAATCGATGGACTGAAGGCGTTAATATAATTCATGGT
CTGTTTTTTGTCAATTACGATACAAATAGACTGAAAACTATGACTTTAGA
TGTACACAACAGAACTGtatttaaatctttaaaatttttctctaaaaaga
tTATCGGAAAGCAAACCGCTCATGACACTCAACTTGCCGCCCATGACACT
CAACTTGCCGCCCATGACACTCAACTTGCCAACCATGACAATAAACTCGC
CGCCCATGGCACTCAACTTGCCACCCATGACAATAAACTGACCACCCATG
ACAACCAACTTACAATTCAAGACAATAAACTCACCGCCCATGACAACCAA
CTTACCATTCAAGACAGTAAACTAACCGCCCATGACAACCAACTTACCAC
ACAAGACAATAAACTCACCGCCCATGACAACCAACTTACCACACAAGACA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00046970-exon-scaffold_119-1491911889:177145..177920 | TCONS_00046970-exon-scaffold_119-1491911889:177145..177920 | Clytia hemisphaerica | exon |
| TCONS_00046970-exon-scaffold_119-1510915933:177145..177920 | TCONS_00046970-exon-scaffold_119-1510915933:177145..177920 | Clytia hemisphaerica | exon |
| TCONS_00046970-exon-scaffold_119-1575043694:177145..177920 | TCONS_00046970-exon-scaffold_119-1575043694:177145..177920 | Clytia hemisphaerica | exon |
| TCONS_00046970-exon-scaffold_119-1491911889:178047..178094 | TCONS_00046970-exon-scaffold_119-1491911889:178047..178094 | Clytia hemisphaerica | exon |
| TCONS_00046970-exon-scaffold_119-1510915933:178047..178094 | TCONS_00046970-exon-scaffold_119-1510915933:178047..178094 | Clytia hemisphaerica | exon |
| TCONS_00046970-exon-scaffold_119-1575043694:178047..178094 | TCONS_00046970-exon-scaffold_119-1575043694:178047..178094 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_119 | supercontig | scaffold_119:177145..178094 + |
Blast
The following BLAST results are available for this feature:
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