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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00046987 ID=TCONS_00046987|Name=TCONS_00046987|organism=Clytia hemisphaerica|type=transcript|length=933bp
CGGGAACAACTAAACTATCaaacttttgctttttttaattttttcttatt
actttacattcatcaATGTCTCAAAGTTTATCGTTTGCGACCGCTAAGTT
TTGGTGGCTCccttgtttgaaaaataaataaatttgaaaaaaattagggg
ctagttaattttcattttatttttgtttattttgtgtcttaagtaaaaaa
atatttgaataaattatttaatttaTAACCGTACGTATAATAAAAATGTC
AAGAACATTAAATCTGTCTGAATGATATAAGTAAAAAGACATTGTATCTG
TCTTGATGTTATATTGAACTGCTTTAGTAGGCATCACACCTGTCCGaatg
atataatctccatcAAGCTGGCCTCCTCACTGTTCGTTCTTCCAGACGTT
ACACCTGTTCaaatgatataatctccatcAAGCTGACCTCCTCACTGCTC
GTTCTTCCAGACGTTACACCTGTTCaaatgatataatctccatcAAGCTG
ACCTCCTCACTGCTCGTTCTTCCAGAGGTTACACCTGTTCaaatgatata
atctccatcAAGCTGACCTCCTCACTGCTCGTTCTTCCAGACATTGCACC
TGTTCGaatgatataatctccatcAAGCTGACCTCCTCACTGCTCCTTCT
TCCAGACGTTACACCTGTTCaaatgatataatctccatcAAGCTGACCTC
CTCACTGCTCGTTCTTCCAGAGGTTACACCTGTTCaaatgatataatctc
catcAAGCTGACCTCCTCACTGCTCGTTCTTCCAGAGGTTACACCTGTTC
GaatgatataatctccatcAAGCTGACCTCCTCACTGCTCGTTCTTCCAG
ACATTGCACCTGTTCGaatgatataatctccatcAAGCTGACCTCCTTAC
TGTTCCTTCTTCCAGACGAATGATATAAAGACT Run BLAST on NCBI transcript from alignment at scaffold_119:9625..10557 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00046987 ID=TCONS_00046987|Name=TCONS_00046987|organism=Clytia hemisphaerica|type=transcript|length=933bp|location=Sequence derived from alignment at scaffold_119:9625..10557 (Clytia hemisphaerica)
AGTCTTTATATCATTCGTCTGGAAGAAGGAACAGTAAGGAGGTCAGCTTg
atggagattatatcattCGAACAGGTGCAATGTCTGGAAGAACGAGCAGT
GAGGAGGTCAGCTTgatggagattatatcattCGAACAGGTGTAACCTCT
GGAAGAACGAGCAGTGAGGAGGTCAGCTTgatggagattatatcatttGA
ACAGGTGTAACCTCTGGAAGAACGAGCAGTGAGGAGGTCAGCTTgatgga
gattatatcatttGAACAGGTGTAACGTCTGGAAGAAGGAGCAGTGAGGA
GGTCAGCTTgatggagattatatcattCGAACAGGTGCAATGTCTGGAAG
AACGAGCAGTGAGGAGGTCAGCTTgatggagattatatcatttGAACAGG
TGTAACCTCTGGAAGAACGAGCAGTGAGGAGGTCAGCTTgatggagatta
tatcatttGAACAGGTGTAACGTCTGGAAGAACGAGCAGTGAGGAGGTCA
GCTTgatggagattatatcatttGAACAGGTGTAACGTCTGGAAGAACGA
ACAGTGAGGAGGCCAGCTTgatggagattatatcattCGGACAGGTGTGA
TGCCTACTAAAGCAGTTCAATATAACATCAAGACAGATACAATGTCTTTT
TACTTATATCATTCAGACAGATTTAATGTTCTTGACATTTTTATTATACG
TACGGTTAtaaattaaataatttattcaaatatttttttacttaagacac
aaaataaacaaaaataaaatgaaaattaactagcccctaatttttttcaa
atttatttatttttcaaacaaggGAGCCACCAAAACTTAGCGGTCGCAAA
CGATAAACTTTGAGACATtgatgaatgtaaagtaataagaaaaaattaaa
aaaagcaaaagtttGATAGTTTAGTTGTTCCCG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00046987-exon-scaffold_119-1491911889:9625..10557 | TCONS_00046987-exon-scaffold_119-1491911889:9625..10557 | Clytia hemisphaerica | exon |
| TCONS_00046987-exon-scaffold_119-1510915933:9625..10557 | TCONS_00046987-exon-scaffold_119-1510915933:9625..10557 | Clytia hemisphaerica | exon |
| TCONS_00046987-exon-scaffold_119-1575043694:9625..10557 | TCONS_00046987-exon-scaffold_119-1575043694:9625..10557 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_119 | supercontig | scaffold_119:9625..10557 . |
Blast
The following BLAST results are available for this feature:
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