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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00046988 ID=TCONS_00046988|Name=TCONS_00046988|organism=Clytia hemisphaerica|type=transcript|length=1095bp
atttctcttatttaaaaacgaaaagaaaagaTCGAAGCAACTTAGACAGG
GACACTTCAAAACAGAATCATTGAAACTTAATACTCTCGttgcaacgttg
tttcaacgtttatctaacgttatatggaggTTATGAACactagataaacg
tcgaaacaacgttttgtgccagaTGGGTGAATACTCTCGCTGCAACGAGA
AAACTTGATCAACTGTTTGCTACTGCGAAAAGACAAACGACTATCTTGAA
CACTTGGACAACTTCTTCTATGTGTCCCCCCTGAcaatattttaaaacat
ttcaaacattaTTTTAACCCGGAAAAGGAAAACACTGTCAGACCAGACGA
ATTGGACAATCTACCTAGTCGCTTCGTAAGATTTCTTAAATAATGGACAT
CAATATTGAACCTTCTACCATCGATGAGATcgcaaaatatttacaaaaac
tcaaaaacaagAAAGCAAATAATGATAATTTGACTCTGAGCTCCTAAAGA
AATGTGAGTGCCTAGCTCTTCTTGACGCTATTCACAAAATGACACTATAT
GTATGGAAAAATCTCGGCATTCCCTCTGTATGGGGAAACTCCAGATTGAA
GACTTTATGGAAAGACAAAGACTCTAAGAAAGATCCTACCAAGTACAGAG
GCTTGAGTATCGGCTCAACAATAAGCAAACTAATTGTGAACAATATCCTA
AGCAGACTCCAGGCACAACTGACGAGGCACAACTGTCCGATGAGCAGAAC
GGATTAAATGGGTGTTCGACTCAATCAGACTTCGATTTAAGGATACCCAA
AATCCTATCTTGATTGACATTCTTAAAAAAGTATCCGAAAGAACTTCCTT
GACTTTGATGAAACTACATTTGATACAACGAGCGGTGTTCCACAAGGTTG
ACCAGAATTCAGAGTCAAAATTCTACTTTCCAACGGTAGTTTAACGCgtt
taaaatttatttgtgctgttttaaattttgcagggaaatcccctttgttt
caaatattttgtccatgattgtagtaaaTCCACCACTTGAGtttcggaaa
aaaatatttatccccactggcATTTACAAAGGCACCGTGTCTGTG Run BLAST on NCBI transcript from alignment at scaffold_119:17649..18743 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00046988 ID=TCONS_00046988|Name=TCONS_00046988|organism=Clytia hemisphaerica|type=transcript|length=1095bp|location=Sequence derived from alignment at scaffold_119:17649..18743 (Clytia hemisphaerica)
CACAGACACGGTGCCTTTGTAAATgccagtggggataaatatttttttcc
gaaaCTCAAGTGGTGGAtttactacaatcatggacaaaatatttgaaaca
aaggggatttccctgcaaaatttaaaacagcacaaataaattttaaacGC
GTTAAACTACCGTTGGAAAGTAGAATTTTGACTCTGAATTCTGGTCAACC
TTGTGGAACACCGCTCGTTGTATCAAATGTAGTTTCATCAAAGTCAAGGA
AGTTCTTTCGGATACTTTTTTAAGAATGTCAATCAAGATAGGATTTTGGG
TATCCTTAAATCGAAGTCTGATTGAGTCGAACACCCATTTAATCCGTTCT
GCTCATCGGACAGTTGTGCCTCGTCAGTTGTGCCTGGAGTCTGCTTAGGA
TATTGTTCACAATTAGTTTGCTTATTGTTGAGCCGATACTCAAGCCTCTG
TACTTGGTAGGATCTTTCTTAGAGTCTTTGTCTTTCCATAAAGTCTTCAA
TCTGGAGTTTCCCCATACAGAGGGAATGCCGAGATTTTTCCATACATATA
GTGTCATTTTGTGAATAGCGTCAAGAAGAGCTAGGCACTCACATTTCTTT
AGGAGCTCAGAGTCAAATTATCATTATTTGCTTTcttgtttttgagtttt
tgtaaatattttgcgATCTCATCGATGGTAGAAGGTTCAATATTGATGTC
CATTATTTAAGAAATCTTACGAAGCGACTAGGTAGATTGTCCAATTCGTC
TGGTCTGACAGTGTTTTCCTTTTCCGGGTTAAAAtaatgtttgaaatgtt
ttaaaatattgTCAGGGGGGACACATAGAAGAAGTTGTCCAAGTGTTCAA
GATAGTCGTTTGTCTTTTCGCAGTAGCAAACAGTTGATCAAGTTTTCTCG
TTGCAGCGAGAGTATTCACCCAtctggcacaaaacgttgtttcgacgttt
atctagtGTTCATAAcctccatataacgttagataaacgttgaaacaacg
ttgcaaCGAGAGTATTAAGTTTCAATGATTCTGTTTTGAAGTGTCCCTGT
CTAAGTTGCTTCGAtcttttcttttcgtttttaaataagagaaat
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00046988-exon-scaffold_119-1491911889:17649..18743 | TCONS_00046988-exon-scaffold_119-1491911889:17649..18743 | Clytia hemisphaerica | exon |
| TCONS_00046988-exon-scaffold_119-1510915933:17649..18743 | TCONS_00046988-exon-scaffold_119-1510915933:17649..18743 | Clytia hemisphaerica | exon |
| TCONS_00046988-exon-scaffold_119-1575043694:17649..18743 | TCONS_00046988-exon-scaffold_119-1575043694:17649..18743 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_119 | supercontig | scaffold_119:17649..18743 . |
Blast
The following BLAST results are available for this feature:
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