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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00047113 ID=TCONS_00047113|Name=TCONS_00047113|organism=Clytia hemisphaerica|type=transcript|length=1136bp
TGAAGACGTTTTTTCACGGAattatgttttcttttcttctgaTATCAGGA
ACttttatttactatttacataatttttagagtcctaaaaaataattaaa
aaagaaaaaagctttcACAACTCTTAATATAcatatcaacaaaaacaaaa
ataaattttagctAGATAAATCAAGGCGTGAAGGATCAATGGCCTGAACC
ATTAATGCCGTTATATGAAAAACACTTTTCATGAAAATACTTTCTTTCGA
ATTTTCGTTCTAAGCAATTTCCCTAAATAAGTTATTCAATATTGGGATTT
CTAATACTAGTTTTATCAGAAATGTCAGAGCGCAATGTTTTGTTTAGCAT
GAAACCACGCCTGCATGATTCCGACTAAGGACCCATTCGTGATTATATGT
agcttttttacaatttttaatgTAGGTAACTCTGGGGCCAGCCCAAGTAA
AAGAATAAAATCACAAGTGTAACACAGgctttatttttcatctttcaaac
cAACAGTCAAAGGTTAAGTTCAGAGGATTAAGCAGATCTATGGCATTATC
TGATTGTGAAAGAgagtaattatctattcaacgcatctaaaaataattat
tcaaagTGCTTTGAGCATTTAacttaatttcgaaaatttaagaatacaaA
ACAAAGAGTTAATTCAAAGTGATTCACTTTCGAAACTTACGTTATGCGAT
CGTATTAAGTTTTTTAGAATAAACCTCACTAttcttagaaaattttcgaa
gcagTCAGACATGTTCTAATGTCCTACAGAAAGTTATATTGAGAAATTGT
TAGACCAAATTAACCTAAGAAACATGCTAAGCAATATAGCGTGGCTTAAA
CAATATACATAAGTATAAACTTTATAACTAGCGAGAACCATCCTGCTAAA
TCTTAACTGTTTGAAATATATAACAAATATGagaaacaaaatattcaaaa
aaattttaaattgtgtaaacacaaagaacacattgttaaaaaaatgcaaa
gaaaaaaatttgtttaaaaacaaactatgtCTTGCAGTTATtggttgaaa
agattttttcaagtgGATTGAAAATTGGTACCAGCAAAAAGTATATTTGA
ACCATAAAATTGATACAGCCACaccatagtttctac Run BLAST on NCBI transcript from alignment at scaffold_121:30083..31218 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00047113 ID=TCONS_00047113|Name=TCONS_00047113|organism=Clytia hemisphaerica|type=transcript|length=1136bp|location=Sequence derived from alignment at scaffold_121:30083..31218 (Clytia hemisphaerica)
gtagaaactatggtGTGGCTGTATCAATTTTATGGTTCAAATATACTTTT
TGCTGGTACCAATTTTCAATCcacttgaaaaaatcttttcaaccaATAAC
TGCAAGacatagtttgtttttaaacaaatttttttctttgcattttttta
acaatgtgttctttgtgtttacacaatttaaaatttttttgaatattttg
tttctCATATTTGTTATATATTTCAAACAGTTAAGATTTAGCAGGATGGT
TCTCGCTAGTTATAAAGTTTATACTTATGTATATTGTTTAAGCCACGCTA
TATTGCTTAGCATGTTTCTTAGGTTAATTTGGTCTAACAATTTCTCAATA
TAACTTTCTGTAGGACATTAGAACATGTCTGActgcttcgaaaattttct
aagaaTAGTGAGGTTTATTCTAAAAAACTTAATACGATCGCATAACGTAA
GTTTCGAAAGTGAATCACTTTGAATTAACTCTTTGTTttgtattcttaaa
ttttcgaaattaagtTAAATGCTCAAAGCActttgaataattatttttag
atgcgttgaatagataattactcTCTTTCACAATCAGATAATGCCATAGA
TCTGCTTAATCCTCTGAACTTAACCTTTGACTGTTggtttgaaagatgaa
aaataaagcCTGTGTTACACTTGTGATTTTATTCTTTTACTTGGGCTGGC
CCCAGAGTTACCTAcattaaaaattgtaaaaaagctACATATAATCACGA
ATGGGTCCTTAGTCGGAATCATGCAGGCGTGGTTTCATGCTAAACAAAAC
ATTGCGCTCTGACATTTCTGATAAAACTAGTATTAGAAATCCCAATATTG
AATAACTTATTTAGGGAAATTGCTTAGAACGAAAATTCGAAAGAAAGTAT
TTTCATGAAAAGTGTTTTTCATATAACGGCATTAATGGTTCAGGCCATTG
ATCCTTCACGCCTTGATTTATCTagctaaaatttatttttgtttttgttg
atatgTATATTAAGAGTTGTgaaagcttttttcttttttaattatttttt
aggactctaaaaattatgtaaatagtaaataaaaGTTCCTGATAtcagaa
gaaaagaaaacataatTCCGTGAAAAAACGTCTTCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00047113-exon-scaffold_121-1491911889:30083..31218 | TCONS_00047113-exon-scaffold_121-1491911889:30083..31218 | Clytia hemisphaerica | exon |
| TCONS_00047113-exon-scaffold_121-1510915933:30083..31218 | TCONS_00047113-exon-scaffold_121-1510915933:30083..31218 | Clytia hemisphaerica | exon |
| TCONS_00047113-exon-scaffold_121-1575043694:30083..31218 | TCONS_00047113-exon-scaffold_121-1575043694:30083..31218 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_121 | supercontig | scaffold_121:30083..31218 . |
Blast
The following BLAST results are available for this feature:
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