TCONS_00047435 (transcript) - C. hemisphaerica

Overview
NameTCONS_00047435
Unique NameTCONS_00047435
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2582

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00047435 ID=TCONS_00047435|Name=TCONS_00047435|organism=Clytia hemisphaerica|type=transcript|length=2582bp
ATTAAATGCTTGAGAACTTATTCTATTTTAGACATCAATGTACATATTGG
TTGTAAATAGCCACGTGTATCATAATACTctttatatataaaaataaata
tatcatGAAGAACAAGTCTGCAGAGACAACACAAAATGTCCTTCAAAAAC
ATTCACAGGCAACAGAAGAACAACTCAGAGTTGCAAAACTTTCACAGATG
ACTAAAGACTCTCATGAAGAAGAGATAAAAATGGTTGCCGATATCACAAG
GAAACCATTGGATATAGTCTCTTTGGCACTTCATGACAGTAATTATGATA
CATCTGTGgcaatccaaaatattttcgaaGGGAAATATGAAGCTGAGGAT
GAATGGCaaacaaaaagtacaaaacGGAACAAAAAGTCAGGGCCTGTTTT
AAATAACACCACTGACTTTGGTAACGATAAATTGGATGTCATTGATATAA
AAGATAACGACCAAAAACCAaatgatataaaaaatatatctcGTGGAGGA
GGAACTTCTGGTACAAAAGGACGTCCTTCATCTCATAACAGAAAAGATGA
TAGGTTCTCAGATGATAGACGAGATGGCTCTGAGGAGCGATCAACAGACT
TTTCTCGTGATCGTATGAGAGGTTCTGATCGTGGTGGACGTATGAGAGGG
AGAGGCAGAGGAGGTGGTCGAGGAGcttcaagaGGTGGTCGCGGAGGATT
TGGTAGAGGTGGAGCCGCAAGAGGGAGTGGAAGACCAGTCCGTGGTGCGG
GAAGAGGTGGCAGAGGAGGCAGACGTGGTGATGGCCGTAGAGAAGAAAAT
GGTTTTGGTGAACCATTGGGCGGTGGATTTGGTGCTCCATCAAGTGGATT
TGGAGAACCAAGTTCTGGAGGGTTTGGTGATCCTGCTGGAAGGTTTGGTC
AACCTGTGAAAGAAGAAACTTGGGATGTTGACGAAAAGACAGAAGATTGG
GGATTGGAAGATACAACCACTTCAACGACGACTGCAAACACAGAAACCAA
ACTCGAAACAGACTGGTCAAAAGACTGGGGCGATGAAGAGATGGAAGAGC
TCGAAACGACAAATGAGAAAGTAGACAGTTTATTCTCACACAAGTTAGAC
TGGGGCCACGTCAATGGGAAAACCGAAGAGAATTCATGGGCGGATAAAGA
ACAACCTTCAAATACGTTGCCTGCAATGGATTCTGGAAAATACGTTCCTG
AGCAGATTGACCCTGCTGTCATATCTTCAATTCCAACCCCTGCTTCATCA
GCTGAAGCAACGTCATACCAACCAACCAATGACATCAGCCGTTACATCAC
AAACAGTGCTGCTAGTAACCAGTTCCCCTCAAGCCAACAGGAAGGTGGAC
TGACGAGTAGTCTTAACGAAAGAGATTTCACAACGTTGACAGAGTCACTT
CAAACCAGTCTCTCTTCACTACCTATTGTATCAGGGATCACTGAAAGTCA
TAAACTGGAACAAGAACAGAGAGATATCGCTAAAAGCATGACCAAGATAC
AGCAACATCAACCAATCCAAAAGTTACTGCCTGGGCCATCGAGAAAACCA
TTACCCAAAAATTCATCTCAGCCTGTGGTGATGCCTCGTTCAGCCAAGAT
GGTACATGATGTCGAAGAACAGTTTGCTGGATTGGAATTCGGTTCTGGAC
CGGTCAGTCCTAGGCTACTAAAAGTCGCTAATTCCTCGCCTGCTCCATAT
TCAAGTGACTTGAATAACACGGAAAGTCTGGAGATTTCAGCGACAAGACA
ACCAATTGCCATTCTACAAGAACCAACACCAATGATCACACCTTCTACCC
CTCCAAAGTCGACAATAACACAACCAGACTTGGTTTCTCATCCCACAATT
TTACCGAACGACACACCACCGACACCTACCATCCCTACGGAACCGGCAAA
CCCGTCACAACTTCCGCCAAGTGATCCTATTGACGTGACAAACTCAATTA
CAAGCTCTTTGAATGCTTTCCAATCACTGGAGAATAGCCAAAACGAGAGT
AAATCGCACTATCTGGGATCACCTGGAAGGGGAATAACTCATTCAATGGC
TTCAGATGCTAATCAATATTCATCAGCGTCTAAACTTCCTGCTTCTCCAA
CGTCAACCTCCTCTCTTGATGTTTTCGCACGTCACAGTGGACTGGGAACC
AGTGTCACCATGGCAATGGACCCAAAACAAAAGCTATCTAGTTACCATGA
TTCACCAAAAGCCTATAGTTCAGTGGAAAAGAACTCAGACAAGCTGTTAT
CTGAGAATAAACAATTCCTTGCTGAACAACAGAGAGCGCTGGCAGCGCTG
GCTGAGCAGCAGCGAGAACACGATGTAATTACTGAACAGAGGGCTGCATT
TGCAGAACAGAAAGCCTTGGCTCAACAGAAATTACTGGCTAGTCAGAGGT
CGAAAGATGACACTCGACCAGCTACAGACTCACTAAATAATAGCCTGAAA
GAGACACGTCCTACTGATAACAGGCTAGGAATCACGGAATCATCTCCTTT
ACAAGTCAAGGATTCACCTTCAAAGAATTCCACCACCAGCGATGCTTCAT
CCTATACATCGAAAGGTCATCCTCATCGTTNC
Run BLAST on NCBI

transcript from alignment at scaffold_128:78459..93308+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00047435 ID=TCONS_00047435|Name=TCONS_00047435|organism=Clytia hemisphaerica|type=transcript|length=14850bp|location=Sequence derived from alignment at scaffold_128:78459..93308+ (Clytia hemisphaerica)
ATTAAATGCTTGAGAACTTATTCTATTTTAGACATCAATGTACATATTGG
TTGTAAATAGCCACGTGTATCATAATACTctttatatataaaaataaata
tatcatGAAGAACAAGTCTGCAGAGACAACACAAAATGTCCTTCAAAAAC
ATTCACAGGTTTGTACTGTTAGTTGACCTACGTATTGATAAATAATATCT
CATAAAACACTTAgaaattctcaatttttctcAAGCTGTAGCAGATGAAG
CAGAATAATGCATCATATTTGCTAGTAAAAgtgttttcaaatttgaagta
atttttcaagTCTTTGTGCACGAAAAATTGATATATTACATCAAAGTGTT
ACGTCACTTTAGATGGTGCAAGAATATACTTCAGCATGTGAAGtatgaga
agctttgtccagtgTAACCAAAAATCGCAATATTTAGCAGCtcaggtttt
gtttttaaaattacaaATGTGTAAAATCAGGTAAAATATATATTCTCATG
TTAAGATAGGTCAGGAGCATTATTAATAATCATTAGCTAAAAATTCTAAT
TAGTATTATTTATTACTTTCAAAATTAGGCAACAGAAGAACAACTCAGAG
TTGCAAAACTTTCACAGATGACTAAAGACTCTCATGAAGAAGAGATAAAA
ATGGTTTGTCTATAATGTTGTtcaaaaatttgtttgtttgtttgtttgtt
tgtctgtctGTCTATAATGTTGTTTCGAAATTGAATTGAATGAGTGATAA
TGATAAAAAGCAACTTCAATTCATTTTATTGTTGTTCCTATTATTTTGAT
TTCGATTTATAATTaaatattattaatttttttcatttgaagcTTATCAA
CTGTTCTGTTCCCAAACTAAATGTATTGACTTTGAGTGAGTGGAACGAGG
caaaagatgtaaaaataaaGTAAAGAATCCAATTAAAGTGTTCAGAAaga
tatctttaaaaaaagttttttattttattctcattTATTCCGCAGGTTGC
CGATATCACAAGGAAACCATTGGATATAGTCTCTTTGGCACTTCATGACA
GTAATTATGATACATCTGTGgcaatccaaaatattttcgaaGGGAAATAT
GAAGCTGAGGTATGGACAATTTTGATTAATCCTTTAACACTTTTACTTTA
ACAGATCTTTTGGAACAATACATACAAGCAATGTATGTGGTGTATGATGT
GTTATAAAATATtgtataaaattattttggcATGAAATTGTATGAATGTG
GCTTCCTAAATATCCAAATAAATTCTAAATCATATTATGCTCTGTACATT
ATATTACGCTATAATTTATTTGATGGTAATTATGTTATATTTTTCTCAGG
ATGAATGGCaaacaaaaagtacaaaacGGAACAAAAAGTCAGGGCCTGTT
TTAAATAACACCACTGACTTTGGTAACGATAAATTGGATGTCATTGATAT
AAAAGATAACGACCAAAAACCAaatgatataaaaaatatatctcGTGGAG
GAGGAACTTCTGGTACAAAAGGTAATATTTTGAGCCTCATAAACTCACAT
AACACTTAcatattttattcttttttatgattttcacaAAGCAAGCATGC
AgtgatttttaaatcattttttatctttttcaaaactttatatTGTTGTA
TATTTTCTATCCGTTCCCTACCAGGACGTCCTTCATCTCATAACAGAAAA
GATGATAGGTTCTCAGATGATAGACGAGATGGCTCTGAGGAGCGATCAAC
AGACTTTTCTCGTGATCGTATGAGAGGTTCTGATCGTGGTGGACGTATGA
GAGGGAGAGGCAGAGGAGGTGGTCGAGGAGGTTTGTTCATTTATTGGCTC
TAAGTTTAAAGTCAGCCTAGAATCAACTAGAAACTCTTTTCAAGTTGTTT
GAAAACCATTCtttttttggtttgaaaattaaaatttgaaaaaaagtctt
attttgaatatacttactttataaatctttttcttttatttagcttcaag
aGGTGGTCGCGGAGGATTTGGTAGAGGTGGAGCCGCAAGAGGGTATGTCA
TGAATAGTCTTTTTTCTATTCAGatcatcaaattttgttatttaaagtTT
GTTAAAAAGCTTCAGGGTACATGTAGAAGGTGGCACTCCAAGAGAGATTG
TGCCAGAACATACTACTTGTAGAGTATGGTTTTTAAGATGTTTAGTTGCA
AGGAGATGACTAAAATTAGAACAGATCATCCACGATGCTCtagacatgtt
ttttaattgtttgttTGTGGCATCTTCATAAAAGATAAATTTTGATTTGG
GTAACTTGGaggtctgaaattttcacaggatgttaGTAGTGATGATAGGA
ATTCTAGCTGTTGTAGGGGCCGGTTAAGAGCAAATTTTAGCATTTGCGTG
TGTTTCGGAAAATGATCTAAATCAGAGCTAAAAACCCAGGAAGTTGTCTA
TCTGACCAATGATTCTCATAGAGGGATTGTAATTAAAACAGTCTTAAAAG
GCCCACATTTCTTTATTGTGGGGCCCTTTATAGAGCACTTTTTTAGCACC
TATTTTCCCATTGACAATAAGTGCCAAAACGCCAAAGTAAAAGGCTTGAT
TGGGTATAAGACTTTCATAACTTCTTTTGACATAGTTGAATAATCAAGCT
ATTAACACCAATATAACAAATGAGCTGTTAAAGGACCcgtttggagctaa
atttagcattttccaCCGAAAATACTGCAGCAGAATTACTaatctatata
ctaaaagtctaattttctatgagccgtggggtggccattatggatttttt
tccaagtctctttttgaatcgagctccgagcgggaaaacagtaGAGTGTC
CTTTTTTCAAGGCGGAGTACGTTTCTTTGGagacacggcaccggaaaata
gcctacggttccttgccgatcgggaaacgtcgcgcggttcggaagcgtat
ctccgttttcgaaattctactttactggtaattttcgtaaaagtaaataa
aacataGAATAGCAAGAAGCTCATTGATTGATCTGGTCTCTCTGCTCTGG
TCACTGGTGCCATCGTTTGTACATGGATAGGGAATGGTCTAATGGTCATG
GTATCCTGTTTCTTAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNctcggcgggtgcgacgccgggtgacggctag
tctatattactaaaagtctaattctgaGTGAGCCGTGAGGGAGCCATTAT
GGacttttgagatgggggtttgagagttacgtgaccgatttccGTTGgat
gggtggttgaaaacgaaagcgaaagtggtcaggggaagagtgtgaaaatt
agcgtttttgaaaagaagtcgttgcagtgtcaatcttttgCAAATTCAAa
gacccactttcccgtggaaataattgatgtttttttgttttttttgggac
tcttggggcataagctaccccgttgaccgcaaaaattccaaaattcgtgg
attgaccgttgacaacgtTAGGGGTAAAGGAACCAAATGACGTATATGAG
ACTTTCAAAATTAAACATATTCAAAATGAGGctttttgggtccgatgacg
tcatcaaaaacagaaaaatacaatatcttgaGTTTGAGAAGAATTTCagc
aatggttgacccctcattggatcggaaatcattgAGAGAATCTTTTGGGT
AAATGATTAATTCATTTCAGTGAAGTGAACAATTTATTAcactttcgatg
acgtcatttagggcccaaatgacgtcacaaaacattaaatttgcaatatt
tttagttttcaaccaTTTAAAGTGGAAGTTTTTCGTTGTTTGGGCTtaca
aatcagatctttttattttactctccccaccatccaaagggcttatgatg
cgttcagctttCTACTCCTCGGCAGGTGCGAcaccgggtgacggctagta
tgTTTCTAAACACCTAATTAAAAGGCTAGAGTGCGTgtaaaaccttcata
acttccTTTAAAGTAGTTTAATAATCAAGTTTTTAACACCAATATAACAT
TTGAGCTGTTAAAGGGCCcgtttggagctaaatttagcattttccaCTGG
AAATACTGCAGCAGAAACCAAAATTAACTTTACACCTAGtctaatttttg
ctaaattcagcTCATTTTGAGACCTAGGAACATAAAATAACCTCATGAAG
TTCTGTTCAATAGTGTATCAAGCNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNCTTTGGGTTATCAAATTTTAGCATAAAGACATGGCTTTCAAGAACTTT
AAGTCCAATCAATGCTAAATTTTTGCTCGTCAAAGGACCCTGGAATGCTT
TATATCGGCCAAATTtggtttttctatctttttgaatGCCTCAAGCATAC
AAATATCAATATCAtagttcttttgtgtttatctNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTTTTAG
TGATTGCTTATGTTGATATATTGATCCTACAAGGTATAAAAAGGCATGTG
CAAAGTATTAGAGTCATATAGCAGAAAAATTGAGAGAGATACAAGCCTCT
AAATCCAAATGCTTATATATATCCAAATTGGCTCATTTTTGGACTGCACT
TTGTTTAAACATAAGTAATATGACAGATTTAAGCTttacaaaaaattctt
ttaaattttaaaagttcatcTTTTCCACGCAATCATCATCAGGGCATAAT
TTCAGTTAATTCATTATATTAGAAACGAATGATGATTTCCCAAGACCCTg
aaaacgaaacaattaaaaattatGTCCCTCTCCTCTAAAGGGATGGGGCA
AATCTTCAATACCATGTTTCAATTTCTGAATCTAAAGtaaaagcaatttt
taaaagTACATTATTCTTCTGACTTATGGTAGAGAATTTATTGACATCTT
GCCCTCAACActaattctatttgtaaaaaagATTTAACTAAAGAGGATAT
TTTTAACTGAAATCTACctgcaacaaagaaaaatagccaATACATTGCCA
TAATAATGAAAAATAGCCAGTAATTTGTCAGCGACAAAGCAAAAAGTTTT
TCACGTCAGCCAGCAGTTGCATGGCTAGTACAAAATTGCTCAAGTTTTGG
TTATTGATTACCGACAATGCTTTCTTTATTAAGGAGTGGAAGACCAGTCC
GTGGTGCGGGAAGAGGTGGCAGAGGAGGCAGACGTGGTGATGGCCGTAGA
GAAGAAAATGGTTTTGGTGAACCATTGGGCGGTGGATTTGGTGCTCCATC
AAGTGGATTTGGAGAACCAAGTTCTGGAGGGTTTGGTGATCCTGCTGGAA
GGTTTGGTCAACCTGTGAAAGAAGGTAGGACTAGGAATTAGTCTTCACTA
CATATGACAAGATAGAGCGAAATTTAAAGACaacattttttagattttgg
tATAGGTGgtaaaaatactaagaaaaatgATGTGATGcaaaaaactatta
aaatagGTTTAATCAAAGAATGAATTTTGATGTGCTGCCAGGCAGCCTTT
GTCTACGTTTTGCCTTTTTATATGATTTTATCATATTATCACTTTTGAAA
GTGCCTATTCGTTAAATTTTGTTAATTCTGGTTAATTTCTAATTTAGAAA
CTTGGGATGTTGACGAAAAGACAGAAGGTTTGTGGCTAAGCAATTTACTT
AAAGTAGAATTTCGAATAAAGTCAAGAAATAAAATTACATAAATTGTTAG
TTTCCCCTTTtaacgattttcaaaaaatgtgaaaaaattcaactttaacT
TGAAAATTCTCAATACAGTAGTCAAAACAGATGGGATTTCCATTATATTG
AGATGAAACCATAATAGTTATTATATACCTCCTTGTTAGCAAGGTGTCTT
TATGGAAAACGACTCATTAAACTAAGCTCTTTCAATGATCTCTAACACCC
ATGAACCTGGGTAAATAACTGCGGCTGTTGAACAGTTTATACTGATTAAA
ATAATAAGGCAAACAAAGGCAAAAAAAGTTTTGCGAGAAAATTGCAAATT
GACTacatattttaaaattggtCTATTTCCAGTTGATCAACCTCTTTCAG
TTTCAGTGCCCAAATGGCAATTGGTAAATAGCACATGGATTAGTCCCTAT
TCTCTGTATCCAGTCCAAATAGTGTTAAGGGCCTATATACACAACTGCAA
GACAGAATATTGGCAAGTCCATTAAATCAGTCTAAGTATAGCTTAATATA
ATCATCAATTCAACTTCAGATTGGGGATTGGAAGATACAACCACTTCAAC
GACGACTGCAAACACAGAAACCAAACTCGAAACAGACTGGTCAAAAGACT
GGGGCGATGAAGAGGTACATTTCCTATTTAATCTGTCCAGTTACGGAACT
ACTGGATGAatgacttttttaattacagGCTTGGAAGTTTGTGGTATCTC
CTTTTATAATACAATTCAGTGAGGCTAAAGTAAAAAGAATTTCTCTATAC
TCCTTTTAACATGATATTTTCCTTGTTTTAGATGGAAGAGCTCGAAACGA
CAAATGAGAAAGTAGACAGTTTATTCTCACACAAGTTAGACTGGGGCCAC
GTCAATGGGAAAACCGAAGAGAATTCATGGGCGGATAAAGAACAACCTTC
AAATACGTTGCCTGCAATGGATTCTGGAAAATACGTTCCTGAGCAGTAAG
TTTTCATTAGAACTTTCCAATTAGCCAACTACCTGAAGTGGATTAGTTTT
GGCAATTggcaaaaatgaaatttttggagCATTCTTAAAAAGATTtcgtt
aaatttggcggggatttgatttggcgaattgccgatttttgaaattttgg
cagggatttaatttatgaattttatcaaaaatcgccaaattaaatccctg
ccaaaatttatccacttgaAGGTACTATTTAAATAACGGGTAAACGACAT
AACTGCACAGAACTGCAATTACTAAAACACAAATTGTTTTTACCCAATCT
TCCTACTTTGAAATATAATTCTGATTTTTTCATCAATAGCTGGATGATAT
TAATGAGTGTGTTTTACAAAATTATGATAAGATTTATAAAACGAAAAATT
ATGAAGAATTTCTGACTTTCTTTCTAATTATCTATACATGTATTGGCGGT
AGTGGTATCTTCATTACTCGTCGTActcagaaaaatatatatttcacCTT
TATTTAGGATTGACCCTGCTGTCATATCTTCAATTCCAACCCCTGCTTCA
TCAGCTGAAGCAACGTCATACCAACCAACCAATGACATCAGCCGTTACAT
CACAAACAGTGCTGCTAGTAACCAGTTCCCCTCAAGCCAACAGGAAGGTG
GACTGACGAGTAGTCTTAACGAAAGAGATTTCACAACGTTGACAGAGTCA
CTTCAAACCAGTCTCTCTTCACTACCTATTGTATCAGGGATCACTGAAAG
TCATAAACTGGAACAAGAACAGAGAGATATCGCTAAAAGCATGACCAAGA
TACAGCAACATCAACCAATCCAAAAGTTACTGCCTGGGCCATCGAGAAAA
CCATTACCCAAAAATTCATCTCAGCCTGTGGTGATGCCTCGTTCAGCCAA
GATGGTACATGATGTCGAAGAACAGTTTGCTGGATTGGAATTCGGTTCTG
GACCGGTCAGTCCTAGGCTACTAAAAGTCGCTAATTCCTCGCCTGCTCCA
TATTCAAGGTGATTAAGCTCAGATATCTTACATAAAACACTTGATGGGAC
TTCTACATCTCCCTGCTGAAgcaattctattgaataaagaTATTTACTCT
AACCGTCCCTCTTTCATCCATGCTTTCTGTTTGTATTGAACACGGCAACA
AACTGGTCTTTTTATGAAGATGCCGTATTATGTTGCCTCAACACCGAAGG
GTTTGAGAGGAATCTTCCACTTCTCAAACAAGAAAAGAAGAAGTGCTTTT
ggaatgacagattgaatctaacGCTCTCTTTATTTTCATGCGGcttactt
ttcaaaatttaacaacagattttactttcaatctagcgtttgtgtgaaaa
ccacttGGTTCAGGCGTTTTGGAANTAAAACGAAAAATTATGAAGAATTT
CTGACTTTCTTTCTAATTATCTATACATGTATTGGCGGTAGTGGTATCTT
CATTACTCGTCGTActcagaaaaatatatatttcacCTTTATTTAGGATT
GACCCTGCTGTCATATCTTCAATTCCAACCCCTGCTTCATCAGCTGAAGC
AACGTCATACCAACCAACCAATGACATCAGCCGTTACATCACAAACAGTG
CTGCTAGTAACCAGTTCCCCTCAAGCCAACAGGAAGGTGGACTGACGAGT
AGTCTTAACGAAAGAGATTTCACAACGTTGACAGAGTCACTTCAAACCAG
TCTCTCTTCACTACCTATTGTATCAGGGATCACTGAAAGTCATAAACTGG
AACAAGAACAGAGAGATATCGCTAAAAGCATGACCAAGATACAGCAACAT
CAACCAATCCAAAAGTTACTGCCTGGGCCATCGAGAAAACCATTACCCAA
AAATTCATCTCAGCCTGTGGTGATGCCTCGTTCAGCCAAGATGGTACATG
ATGTCGAAGAACAGTTTGCTGGATTGGAATTCGGTTCTGGACCGGTCAGT
CCTAGGCTACTAAAAGTCGCTAATTCCTCGCCTGCTCCATATTCAAGGTG
ATTAAGCTCAGATATCTTACATAAAACACTTGATGGGACTTCTACATCTC
CCTGCTGAAGCAATTCTATTTACTCTAACCGCCCCTCTTTCATCCATGCT
TTCTGTTTGTATTGAACACGGCAACAAACTGGTCTTTTTATGAAGATGCC
GTATTATGTTGCCTCAACACCGAAGGGTTAGAGAGGAATCTTCCACTTCT
CAAACAAGAAAAGAAGAAGTGCTTTTggaatgacagattgaatcgaactc
tttgttttcatgcggcttacttttcaaaatttaacaacagattttacttt
caatctagcgtttgtgtgaaaaccacttGGTTCAGGCGTTTTGGAACGGA
AGGGAaaaaagtggcttcatttcccatccaagagtttcaaCTCTAGCTCC
TTCTGGGAAGGAACTCCATTAAACTGAACTCAATGAtctttgtgtttgtt
tttatttgaaatcagattagtaataaaatattttattcgtTCAATTCAGT
GACTTGAATAACACGGAAAGTCTGGAGATTTCAGCGACAAGACAACCAAT
TGCCATTCTACAAGAACCAACACCAATGATCACACCTTCTACCCCTCCAA
AGTCGACAATAACACAACCAGACTTGGTTTCTCATCCCACAATTTTACCG
AACGACACACCACCGACACCTACCATCCCTACGGAACCGGCAAACCCGTC
ACAACTTCCGCCAAGTGATCCTATTGACGTGACAAACTCAATTACAAGCT
CTTTGAATGCTTTCCAATCACTGGAGAATAGCCAAAACGAGAGTAAATCG
CACTATCTGGGATCACCTGGAAGGGGAATAACTCATTCAATGGTGTGTTT
TTCATAATAGATTCTATAGATGAATTTTTATCTATACTATCGATGTCAAA
GTataatttgacaatttttgggtatttcaaaataaataacattACGAACA
AAGTTTCGAANTTATGCTATCGATGTCAAAGTataatttgacaatttttg
ggtatttcaaaataaatagcaTTATGAACAAAGTTTCGAATTTGAGAGAG
TCGATATGGATATTCTGCTTTCAAGATAAAGCCAGCTATCGTACCGTGTT
CCTTATCTTTATATTTAGGTCATCTACGATCACCAATCTTAAATAGTATA
ATACTACTTTTATACTTAATTTACTTAAGGCTCAGATGCATCGAAaacaa
atatttcccgtttCTAATTTCACCTTTAACATTTCTTCGTTCGCTCTAGG
CTTCAGATGCTAATCAATATTCATCAGCGTCTAAACTTCCTGCTTCTCCA
ACGTCAACCTCCTCTCTTGATGTTTTCGCACGTCACAGTGGACTGGGAAC
CAGTGTCACCATGGCAATGGACCCAAAACAAAAGCTATCTAGTTACCATG
ATTCACCAAAAGCCTATAGTTCAGTGGAAAAGAACTCAGACAAGCTGTTA
TCTGAGAATAAACAATTCCTTGCTGAACAACAGAGAGCGCTGGCAGCGCT
GGCTGAGCAGCAGCGAGAACACGATGTAATTACTGAACAGAGGGCTGCAT
TTGCAGAACAGAAAGCCTTGGCTCAACAGAAATTACTGGCTAGTCAGAGG
TCGAAAGATGACACTCGACCAGCTACAGACTCACTAAATAATAGCCTGAA
AGAGACACGTCCTACTGATAACAGGCTAGGAATCACGGAATCATCTCCTT
TACAAGTCAAGGTAATATATCAAATATTCTTACATTCGTACAAAACTTAT
TTCATCATATTTCAACTTTCACTCATTGCTCAGAGATTTTTCTGAGCTCT
TTTTATTTCCGTATCGGCCAAAATACTCAGTCCAAGATTGagcattttga
ttattttctacGTATTTAAAATCTTTCGGGAGCTTCGCCTTCTAAACTAC
CACCAGGACTATGCCCTGGACCCAATGGTGACCCTGAGCTTTATCAATGC
ACAGCTTCGTTGAGCAGATGTTCTTACAGGCATATTAGAAACTCAAccta
aattgacaaaaattgccCCACTTCATAGTGCTTAAAAAATCCCTTTCTTT
TGCtcacttttttacgagtttatgtaggtgtgtttttcagcgacggtgAC
GGTAAGATTCAAATTTGACTAGCCGAAGACGACGGTAGATCAGCACTACT
ATCCTCGATTTTGCAAGTCAAAACGGAAAACTGtcattccaaatcgcttc
agtcactctaccatCCTCataagtgcaaatacataacgTCGCTTTTAACG
AATGTCTCTGGAGCACTCTCTTANTCTAGTTACCATGATTCACCAAAAGC
CTATAGTTCAGTGGAAAAGAACTCAGACAAGCTGTTATCTGAGAATAAAC
AATTCCTTGCTGAACAACAGAGAGCGCTGGCAGCGCTGGCTGAGCAGCAG
CGAGAACACGATGTAATTACTGAACAGAGGGCTGCATTTGCAGAACAGAA
AGCCTTGGCTCAACAGAAATTACTGGCTAGTCAGAGGTCGAAAGATGACA
CTCGACCAGCTACAGACTCACTAAATAATAGCCTGAAAGAGACACGTCCT
ACTGATAACAGGCTAGGAATCACGGAATCATCTCCTTTACAAGTCAAGGT
AATATATCAAATATTCTTACATTCGTACAAAACTTATTTCATCATATTTC
AACTTTCACTCCTTGCTCAGAGATTTTTCTGAGCTCTTTTTATTTCCGTA
TCGGCCAAAATACTCAGTCCAAGATTGagcattttgattattttctacGT
ATTTAAAATCTTTCGGGAGCTTCGCCATCTAAACTACCACCAGGACTTTG
CCCTGGACCCAATGGGGACCCTGAGCTTTATCAATGCACAGCTTCGTAGA
GCAGATGTTCTTACAGGCATATTAGAAACTCAACCTTAATTGACAAAAAC
TGCCCCACTTCATAGtgcttaaaaaaatctctttccTTTGCTCACTTTCT
TACGAGTTTATGTaggtgtgtttttcagcgacggtgACGGTAAGATTCTC
ATTTGACTAGCCGAGGACGACGGTAGATCAGCACTATTACCATCCTCGAT
TTTGCAAGTCAAAACGGAAAACTGtcattccaaatcgcttcagtcactct
accatCCTCataagtgcaaatacataaattcGCTTTTAACGAATGTCTCT
GGAGCACTCTCTTAATGTTGTAGAATATCAAATTGAAGTCCTTTCGCTTT
AAGTGGGCACTCTCTTTGCAACCGTGTTGAAACGATATTGTAATTAGTCT
GTCTGTTAGTATCATACACGTCATTTATTGAATAAAGAGAGGCTTCGAAG
TAAATTGGTCCAGCAAAATGCTTATTgtttgcttttgaaaaaattgatca
CGTTTTTCCTTTCTATCGACTTTAACAGGATTCACCTTCAAAGAATTCCA
CCACCAGCGATGCTTCATCCTATACATCGAAAGGTCATCCTCATCGTTNC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_030211XLOC_030211Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00047435-exon-scaffold_128-1491911889:78459..78616TCONS_00047435-exon-scaffold_128-1491911889:78459..78616Clytia hemisphaericaexon
TCONS_00047435-exon-scaffold_128-1510915933:78459..78616TCONS_00047435-exon-scaffold_128-1510915933:78459..78616Clytia hemisphaericaexon
TCONS_00047435-exon-scaffold_128-1575043694:78459..78616TCONS_00047435-exon-scaffold_128-1575043694:78459..78616Clytia hemisphaericaexon
TCONS_00047435-exon-scaffold_128-1491911889:79037..79111TCONS_00047435-exon-scaffold_128-1491911889:79037..79111Clytia hemisphaericaexon
TCONS_00047435-exon-scaffold_128-1510915933:79037..79111TCONS_00047435-exon-scaffold_128-1510915933:79037..79111Clytia hemisphaericaexon
TCONS_00047435-exon-scaffold_128-1575043694:79037..79111TCONS_00047435-exon-scaffold_128-1575043694:79037..79111Clytia hemisphaericaexon
TCONS_00047435-exon-scaffold_128-1491911889:79454..79567TCONS_00047435-exon-scaffold_128-1491911889:79454..79567Clytia hemisphaericaexon
TCONS_00047435-exon-scaffold_128-1510915933:79454..79567TCONS_00047435-exon-scaffold_128-1510915933:79454..79567Clytia hemisphaericaexon
TCONS_00047435-exon-scaffold_128-1575043694:79454..79567TCONS_00047435-exon-scaffold_128-1575043694:79454..79567Clytia hemisphaericaexon
TCONS_00047435-exon-scaffold_128-1491911889:79808..79979TCONS_00047435-exon-scaffold_128-1491911889:79808..79979Clytia hemisphaericaexon
TCONS_00047435-exon-scaffold_128-1510915933:79808..79979TCONS_00047435-exon-scaffold_128-1510915933:79808..79979Clytia hemisphaericaexon
TCONS_00047435-exon-scaffold_128-1575043694:79808..79979TCONS_00047435-exon-scaffold_128-1575043694:79808..79979Clytia hemisphaericaexon
TCONS_00047435-exon-scaffold_128-1491911889:80133..80288TCONS_00047435-exon-scaffold_128-1491911889:80133..80288Clytia hemisphaericaexon
TCONS_00047435-exon-scaffold_128-1510915933:80133..80288TCONS_00047435-exon-scaffold_128-1510915933:80133..80288Clytia hemisphaericaexon
TCONS_00047435-exon-scaffold_128-1575043694:80133..80288TCONS_00047435-exon-scaffold_128-1575043694:80133..80288Clytia hemisphaericaexon
TCONS_00047435-exon-scaffold_128-1491911889:80452..80500TCONS_00047435-exon-scaffold_128-1491911889:80452..80500Clytia hemisphaericaexon
TCONS_00047435-exon-scaffold_128-1510915933:80452..80500TCONS_00047435-exon-scaffold_128-1510915933:80452..80500Clytia hemisphaericaexon
TCONS_00047435-exon-scaffold_128-1575043694:80452..80500TCONS_00047435-exon-scaffold_128-1575043694:80452..80500Clytia hemisphaericaexon
TCONS_00047435-exon-scaffold_128-1491911889:86342..86532TCONS_00047435-exon-scaffold_128-1491911889:86342..86532Clytia hemisphaericaexon
TCONS_00047435-exon-scaffold_128-1510915933:86342..86532TCONS_00047435-exon-scaffold_128-1510915933:86342..86532Clytia hemisphaericaexon
TCONS_00047435-exon-scaffold_128-1575043694:86342..86532TCONS_00047435-exon-scaffold_128-1575043694:86342..86532Clytia hemisphaericaexon
TCONS_00047435-exon-scaffold_128-1491911889:86806..86835TCONS_00047435-exon-scaffold_128-1491911889:86806..86835Clytia hemisphaericaexon
TCONS_00047435-exon-scaffold_128-1510915933:86806..86835TCONS_00047435-exon-scaffold_128-1510915933:86806..86835Clytia hemisphaericaexon
TCONS_00047435-exon-scaffold_128-1575043694:86806..86835TCONS_00047435-exon-scaffold_128-1575043694:86806..86835Clytia hemisphaericaexon
TCONS_00047435-exon-scaffold_128-1491911889:87428..87522TCONS_00047435-exon-scaffold_128-1491911889:87428..87522Clytia hemisphaericaexon
TCONS_00047435-exon-scaffold_128-1510915933:87428..87522TCONS_00047435-exon-scaffold_128-1510915933:87428..87522Clytia hemisphaericaexon
TCONS_00047435-exon-scaffold_128-1575043694:87428..87522TCONS_00047435-exon-scaffold_128-1575043694:87428..87522Clytia hemisphaericaexon
TCONS_00047435-exon-scaffold_128-1491911889:87690..87853TCONS_00047435-exon-scaffold_128-1491911889:87690..87853Clytia hemisphaericaexon
TCONS_00047435-exon-scaffold_128-1510915933:87690..87853TCONS_00047435-exon-scaffold_128-1510915933:87690..87853Clytia hemisphaericaexon
TCONS_00047435-exon-scaffold_128-1575043694:87690..87853TCONS_00047435-exon-scaffold_128-1575043694:87690..87853Clytia hemisphaericaexon
TCONS_00047435-exon-scaffold_128-1491911889:88366..88866TCONS_00047435-exon-scaffold_128-1491911889:88366..88866Clytia hemisphaericaexon
TCONS_00047435-exon-scaffold_128-1510915933:88366..88866TCONS_00047435-exon-scaffold_128-1510915933:88366..88866Clytia hemisphaericaexon
TCONS_00047435-exon-scaffold_128-1575043694:88366..88866TCONS_00047435-exon-scaffold_128-1575043694:88366..88866Clytia hemisphaericaexon
TCONS_00047435-exon-scaffold_128-1491911889:90358..90700TCONS_00047435-exon-scaffold_128-1491911889:90358..90700Clytia hemisphaericaexon
TCONS_00047435-exon-scaffold_128-1510915933:90358..90700TCONS_00047435-exon-scaffold_128-1510915933:90358..90700Clytia hemisphaericaexon
TCONS_00047435-exon-scaffold_128-1575043694:90358..90700TCONS_00047435-exon-scaffold_128-1575043694:90358..90700Clytia hemisphaericaexon
TCONS_00047435-exon-scaffold_128-1491911889:91108..91569TCONS_00047435-exon-scaffold_128-1491911889:91108..91569Clytia hemisphaericaexon
TCONS_00047435-exon-scaffold_128-1510915933:91108..91569TCONS_00047435-exon-scaffold_128-1510915933:91108..91569Clytia hemisphaericaexon
TCONS_00047435-exon-scaffold_128-1575043694:91108..91569TCONS_00047435-exon-scaffold_128-1575043694:91108..91569Clytia hemisphaericaexon
TCONS_00047435-exon-scaffold_128-1491911889:93237..93308TCONS_00047435-exon-scaffold_128-1491911889:93237..93308Clytia hemisphaericaexon
TCONS_00047435-exon-scaffold_128-1510915933:93237..93308TCONS_00047435-exon-scaffold_128-1510915933:93237..93308Clytia hemisphaericaexon
TCONS_00047435-exon-scaffold_128-1575043694:93237..93308TCONS_00047435-exon-scaffold_128-1575043694:93237..93308Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_128supercontigscaffold_128:78459..93308 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
9.84978	6.11393	7.6248	4.67158	2.46523e-08	0.911349	1.06997	1.37521	1.07548	1.51661	3.69289	1.52215	5.2734	5.62064	4.9473	3.91266	3.00817	4.4079	2.45728	2.92328	6.95645	4.89353	3.33743	7.02495	1.70788	4.62079	2.76188	3.66461	3.74955	3.55573
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00047435 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top