|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00047448 ID=TCONS_00047448|Name=TCONS_00047448|organism=Clytia hemisphaerica|type=transcript|length=1211bp
AGGGGGTTTAATTTTTACATTAAtaaacttgtaataaaattattgctata
aaatttacattcaaaaaatttatgatattttatgGACAAAATAAATCTTC
TAAAATAATGAACAacgtttttccaattttttacgATTCTGTATTATTGA
CCTAGcactaaaaaaacaaaagctCCAAACTTAAAAAAACAGAACAATTT
GTCGTAATCGTTGATACAAATACAGCCGAAATAGTCCCTTGCAATAGTGT
TCGCCAAGCTTAATAGATAATATGAGTCACCGGCACTGACTGGCAATTTG
TACTCCTTGggatgaaagaaatttgttgttctaaaagGCTAGcatcttca
aaaaaatcttggtgggacatgaagaagaaaaagaagaatgtCTTAAAATA
CCGTGATCATTTTTGTCCGAGTTACAATTTTAACATAAAACTAACAATAC
AAAGTGCATGCTCTTtttaaacacaaaaacaaaacggCTTAAAAGGGAAA
ACTCGATGTCAAGATACATAAATAGCTAATACTGATTGCCAAAAAAGGCA
AGGAGGGGTAGATAAACTAAACAACAAAAAGTGaagaatgtttgaaaatt
aAGATTTGGCCAGAGAGCAAAATCCCtgtaaaaattcattttaataTAGA
CTAACCTTTTGACTTTTTACTAATAAGGCAGAACAAGGAGTTGATACACT
CCAGGATGTTATGATGGTATTAAGAAAGTCTCACTATCTAAAATATTTGA
CTTTTAGGTTAACGTTTGTAACTTGCGTAAAGCAACCGTCTTTATCGGAG
TTTTAACCTTCAAAGGTATTGATTCTTTCAGAGAACGAATGTTCCGATAT
TTTGTCGTATGTTTTTGTTCACGAAAAAAATTCAGTTGTTCGATACCATT
CTATCTGAAGATCGAcaatttccatttcaagtatTTTATTTGATTAAGTT
ATGTTCTTAATTGATACACGTTAGCTGGTGGCAAGAAAGTCACCATGATA
ATACCACACTTATCTCCGTCTGACACCTCAACAGGTACCCTTTACAAACG
CATCCTTCTCCTTTCAATCACAACAACTCGAAATATGATTGGTTGTGTAT
CCGATCAACTCAATATTTGATTGGCTATCCCCTCAGTCAACTCGAATCAT
GATTGGGTTATCTGTCATCACGTGATCGTTCACCATTCAAATTCATTCGA
CATATTGGACA Run BLAST on NCBI transcript from alignment at scaffold_128:72564..73828- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00047448 ID=TCONS_00047448|Name=TCONS_00047448|organism=Clytia hemisphaerica|type=transcript|length=1265bp|location=Sequence derived from alignment at scaffold_128:72564..73828- (Clytia hemisphaerica)
AGGGGGTTTAATTTTTACATTAATAAACTTGTAATAAAATTATTGCTATA
AAATTTACATTCAAAAAATTTATGATATTTTATGGACAAAATAAATCTTC
TAAAATAATGAACAACGTTTTTCCAATTTTTTACGATTCTGTATTATTGA
CCTAGCACTAAAAAAACAAAAGCTCCAAACTTAAAAAAACAGAACAATTT
GTCGTAATCGTTGATACAAATACAGCCGAAATAGTCCCTTGCAATAGTGT
TCGCCAAGCTTAATAGATAATATGAGTCACCGGCACTGACTGGCAATTTG
TACTCCTTGGGATGAAAGAAATTTGTTGTTCTAAAAGGCTAGCATCTTCA
AAAAAATCTTGGTGGGACATGAAGAAGAAAAAGAAGAATGTCTTAAAATA
CCGTGATCATTTTTGTCCGAGTTACAATTTTAACATAAAACTAACAATAC
AAAGTGCATGCTCTTTTTAAACACAAAAACAAAACGGCTTAAAAGGGAAA
ACTCGATGTCAAGATACATAAATAGCTAATACTGATTGCCAAAAAAGGCA
AGGAGGGGTAGATAAACTAAACAACAAAAAGTGAAGAATGTTTGAAAATT
AAGATTTGGCCAGAGAGCAAAATCCCTGTAAAAATTCATTTTAATATAGA
CTAACCTTTTGACTTTTTACTAATAAGGCAGAACAAGGAGTTGATACACT
CCAGGATGTTATGATGGTATTAAGAAAGTCTCACTATCTAAAATATTTGA
CTTTTAGGTTAACGTTTGTAACTTGCGTAAAGCAACCGTCTTTATCGGAG
TTTTAACCTTCAAAGGTATTGATTCTTTCAGAGAACGAATGTTCCGATAT
TTTGTCGTATGTTTTTGTTCACGAAAAAAATTCAGTTGTTCGATACCATT
CTATCTGAAGATCGACAATTTCCATTTCAAGTATTTTATTTGATTAAGTT
ATGTTCTTAATTGATACACGTTAGCTGGTGGCAAGAAAGTCACCATGATA
ATACCACACTTATCTCCGTCTGACACCTCAACAGGTACCCTTTACAAACG
CATCCTTCTCCTTTCAATCACAACAACTCGAAATATGATTGGTTGTGTAT
CCGATCAACTCAATATTTGATTGGCTATCCCCTCAGTCAACTCGAATCAT
GATTGGGTTATCTGTCATCACGTGATCGTTCACCATTCAAATTCATTCGA
CATATTGGACAAGAGTCGTGCTGTAAAATAAGTAAAAGAATCANATTCAT
TCGACATATTGGACA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00047448-exon-scaffold_128-1575043694:72628..73828 | TCONS_00047448-exon-scaffold_128-1575043694:72628..73828 | Clytia hemisphaerica | exon |
| TCONS_00047448-exon-scaffold_128-1575043694:72564..72573 | TCONS_00047448-exon-scaffold_128-1575043694:72564..72573 | Clytia hemisphaerica | exon |
| TCONS_00047448-exon-scaffold_128-1510915933:72628..73828 | TCONS_00047448-exon-scaffold_128-1510915933:72628..73828 | Clytia hemisphaerica | exon |
| TCONS_00047448-exon-scaffold_128-1510915933:72564..72573 | TCONS_00047448-exon-scaffold_128-1510915933:72564..72573 | Clytia hemisphaerica | exon |
| TCONS_00047448-exon-scaffold_128-1491911889:72628..73828 | TCONS_00047448-exon-scaffold_128-1491911889:72628..73828 | Clytia hemisphaerica | exon |
| TCONS_00047448-exon-scaffold_128-1491911889:72564..72573 | TCONS_00047448-exon-scaffold_128-1491911889:72564..72573 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_128 | supercontig | scaffold_128:72564..73828 - |
Blast
The following BLAST results are available for this feature:
|
