TCONS_00047582 (transcript) - C. hemisphaerica

Overview
NameTCONS_00047582
Unique NameTCONS_00047582
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2219

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00047582 ID=TCONS_00047582|Name=TCONS_00047582|organism=Clytia hemisphaerica|type=transcript|length=2219bp
GTGAAGAAGCACAAAGTTATTCCTTCCGCACAAGATTTTGAAGTGAAAGA
AGTTCAAAATGGAACTACGATGGAGGAAATGTTACAAAACATTATACCAA
TGCAAGGAGATAATTGGCAAGTAACTTTCAAAGCCACTCGCGATGCTACG
AAATCCGGAGGCAGAACATTCTTACGGCTAACCTCGTCACCGATAAATAA
GAATTATTCAGAAGGTCACGCAGCACTCGTTGTCAAATACAATAATGCAG
GTATTCTAATTCGAACTCCGATAAACAATGATGTCCATTTTACCGTAAGT
TTCTTTTTACCTGGAGATCAAGAAGTGGATATGAAGATTGTGAAATATGC
TTGTGACGGATGCCCAGTCAGATTCAAAGCATTTGTGGATAACGTAGAAA
AAGTTTCGTTGAACACCACTTCGACTGTTTGGTATAATGTCAGCTGCTTT
GCTCCATGGTTTAATGATGATATTGACAAAACGACTGATTTGAAATATAC
ATCGAACCCACCGTTATTTCGCGGCGAACAGTCATTCAAGCCTACTACTT
TATTAGCAACACTTCCATCATGGCCCAATGCAAATACACCCTTCCATGTA
tccttcaaaatcaaaattgtcgCATGGTTGAACAATTGGCATCCGATTAT
AAATTTTCACAACAATGATGGAGCAGAAACTCGGCTTCCAACTTTCTTTT
TCACTGCTTATAGGATTGTTGGATCGTATAAAACCGGTGCTGCTAATTTT
AATAACATTGGAATCGTGCCAACTTCTGACATCACATTGAATGAGTTCCA
CGAAGTTCGCTTGGAACAGACGATTGACGCTAACGGTGTTGgttttatca
gattttatttCAACAATCAGCAATTTGGATCTGCCGAACGAAACTATAAC
CAAGCGACACCTTTTACAGATGTACACGTTAAGATTCATTACAGCAATGG
TTTTGATTTTGTCATTAAAGAATTTGATTATAGTGGAAGTGATTAGTCAA
AAACCAAAGTTTCTCGCAATAAATATGTACAATAATTATATAAGTACAAT
AGATCGTATTAAATACAACGTTAACATGGCGTTCGCTTGGAACAGACGAT
TAACGCTAACGATGTTGGTTTTGTATTTAATGTACAATCAGCAATTTGGA
TCTGCCAAACAAAACTATAACCAAGCGACGCCTATACGAGAACAATAATT
GGAGCCAAATCTTATATGTAAATGTAGCGATGCACGTAAAACAACATAGG
AAAAAGCAATTTGTTAGCAatccgaattttaaaacaaattacaCGCTTGT
TTATAAgcaccagtaaattttggctcagacGAGGCTGCACTTAAAATTGC
ACTTAAAAATCATTCCACTGGATTTGTTAAAGATTTTTTTTTAAATAATA
GTGATATGCTTAACCATCAATTTTAACTTTCAAGCTTTTTCATATTGGAT
TGACACGGATGTGGAGCAAGATTGGTCAGAAAGAGGAAAAATAACGTTTT
TTGCTTATCAGCAAAATATAACAATAGGCAGACACTGTCCTGATATGAAA
TATGTGTCTAATATGAAAAGGGAGCACTAAAAATAAAACTTTCAACCATA
AAAACCCTGGTCTGGAAGCCTTTTGTTTCTTTCCATTGTTTCTTACTTGA
ACTTGCGttgagaaattagtttgttttgctcactttttgatcatgtgatt
aaatcttaaaccaatcccaagaggagtacttggtaacgtgatcaaaaact
gagcaaatcatcttttgataataacaaaggaaaaagctaacaaaaagtta
aaacaataagcttccagaccagtgttttttataagaactatgctttaacc
ttggaacatagaatttctatcccctttGTGATTTCATTCGGaatctttat
ccccactgtgggaaaaagcttcaccgggactgtgagacagggctGTATTT
ATGTCTGATTCTCATTACCTTGACCTTTAAGATGTTTGAAATTTCATTCG
ATTTCTGGCTTAGCattgtaaaataattttttttttaaacgattttaaaa
gGTTTCgtttaaataaaagtgatatcgtttgcttactgaTCAATTTTCAT
TTACAAACTTTTTCGTCACATGGGATtagacacggatgtggagcaagatt
ggtcagaaaaaggaaaagaaaaacattttttgcttatatcagaaTAATAT
AACgataggaagacactgt
Run BLAST on NCBI

protein sequence of TCONS_00047582-protein

>TCONS_00047582-protein ID=TCONS_00047582-protein|Name=TCONS_00047582-protein|organism=Clytia hemisphaerica|type=polypeptide|length=331bp
VKKHKVIPSAQDFEVKEVQNGTTMEEMLQNIIPMQGDNWQVTFKATRDAT
KSGGRTFLRLTSSPINKNYSEGHAALVVKYNNAGILIRTPINNDVHFTVS
FFLPGDQEVDMKIVKYACDGCPVRFKAFVDNVEKVSLNTTSTVWYNVSCF
APWFNDDIDKTTDLKYTSNPPLFRGEQSFKPTTLLATLPSWPNANTPFHV
SFKIKIVAWLNNWHPIINFHNNDGAETRLPTFFFTAYRIVGSYKTGAANF
NNIGIVPTSDITLNEFHEVRLEQTIDANGVGFIRFYFNNQQFGSAERNYN
QATPFTDVHVKIHYSNGFDFVIKEFDYSGSD
Run BLAST on NCBI

transcript from alignment at scaffold_132:124770..139469-

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00047582 ID=TCONS_00047582|Name=TCONS_00047582|organism=Clytia hemisphaerica|type=transcript|length=14700bp|location=Sequence derived from alignment at scaffold_132:124770..139469- (Clytia hemisphaerica)
GTGAAGAAGCACAAAGTTATTCCTTCCGCACAAGATTTTGAAGTGAAAGA
AGGTATGTAATTCATATTCAAAAATTTATACCTTATCGGCCAAAACTTAG
TCGGCCTTAATATTAGTCGGCCTTAATTATTAGTCTGCCCTGATTTTAGT
CACCTTGTCAAAATTTAGTCACTAAGGGCCGACTAATAATTAAGTTTTGG
CCATTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAAAAAAANNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATGAAAAATAATGCCTAG
GGTCTGAAGTTTGTCGAACAAAGATTGTCTTGCATGGGAATATATAGAGC
AGTGCAGAAGAAAGTGCTGAGTGTTTTCAACAGAGTTACTTCGGCAACCA
CAGAAAGGGTCTAAAGTGTCGCGGAAGCCATGTCTAAATTTATGCCATTA
TGCCATTATGCCATTATGGCCATTTCTAAATTTTTAGTCGGCCCAAATTT
TTAGTCGGCCCCAATTTTAGTCACCAAGCCAAAATTTAGTCACTCAGGGC
CTGACATTATATAGTTGCAAAAGAATTGGTGCAGCTTTTCTAAAGGCTTG
GGGACACGAGAACATGGTTTCATTTTTTGTGAGGGAAATACACGCAAGAT
ACACTGATTTTGTCCCAAAGACAAAAGTGCAGATTTCACATTTATTGGTA
AAAAGAAAAATGGGGTGGAGACACGAGAAAGCGTTTCAGGTTGGTGGGAT
GGATCATGCTGCATTGCACCAACGCAAAAAAACTTCTCGTGTCCCCAAGC
CTCAAAACATTGACCTTTTTAGGGTTACTTTTAAAGCTGTTTTAGCTTTC
TTAGACCAAAGATTTTAGCCTGCACCGCCAAATTACAAAAAAAATCAATG
TTCCGACTTAAAAATTCGAAATTTCCATGAACCCAAAGAAAATCAACAGA
TCCAAGACCAAGCATATAAATAAACTAGCCTGGATATCCAAGCTCAAAAT
TTTAGAAAAAACAAAATTTACAACAACATACAAAGTTCTAAAATTATAGA
GCTTGGTCTCCCTAGAGAATGAAAGTGCAAACCCATGTTTCCTAGCCAAC
CCAGGGCAGCAAAACAGAAATTAATAGAAAAGTCTTACAAGATCTAAGCC
CTATCTTCACTAGCAACTGGAGGACTATCCTCTTTTTGCTTAAGAATTGC
TCCGCGCCGTGTAGATTGGCCCTTACGGCTTTAGCGAAGTGAGCGCAAGC
AGGCAGACTGCATTCTCATGTGGAGAATGCAAAACGCTCTAGGGAGACCA
GGTTGTAAACCAGAACATAAAATATCAAAAACTAGACTGAAATAGTTTAC
AGCCTGGATATCCAGGCTAATAAATAAGCATGAATTAAGGCTGAAAATGA
GATTTTGCTAAGCATATTGGGCCTCGACCCGATTTTCCCGTATGCTTATA
AAAAAAAAGTGTACCTTTTAAAACCTACAAAAAATAGAGGTACCCTCTAT
CTGAAAATTTAGGTGGAATTTGAGGCTGAAACTTTTTGTGTTGAAAGCAC
AAGACATGTATATGGTTTTTTCCCCAGCAGTGATGTTTTGTAAAAACCAG
TTTTCAGTTTTTCACGAGGAAGGGAAAAATGATCTTTTAGCTATTTACCC
CTTATAAAATGATTTTTCTCGAATTGCTTTTTATAAAATAGCTCTTTTCA
CTTATGTTACAATTCGATTATTAGTACATAATTATTTTCAAATCAAATGT
TAAAATCAAAATACACCTTAAAAACCTACACTATAACACCTTAAAACCTA
CACTATTAGACGTTAAAAACTACACTATTACACCTTAAAACCCATACTAT
TACACCTTAAAACCTACACTATAACACCTTAACATCTACACTATAACACC
TTAAAACCCATACTATTACACCTTAAAACCTACACTATAACACCTTAAAA
CCTACACTATTACACCTTAACATCTACACTATAACACCTTAAAACCTACA
CTATAACACCTTAAAAGCTACACTATTACACCTTAAAACCTACACTATAA
CACCTTAAAACCCATACTATTACACCTTAAAAGCTACACTATTACACCTT
AAAACCTACACTATTACACCTTAAAACCCATACTATTACACCTTAAAACC
CATACTATTACACCTTAAAACCTACACTATAACACCTTAAAACCTACACT
ATTGATTTACACCTTAAAACCTACACTATAAGACCCTAAAACCTACACTA
TTACACCTTAAAACCTACACTATAAGACCCTAAAACCTACACTATAAGAC
TCTAAAACCTACACTATTACACCTTAAAACCTACACTATAACACCTTAAA
ACCTACACTATTAGACGTTAAAACCTACACTATTACACCTTAAAACCTAC
ACTATTACACCTTAAAACCTACACTATTACACCTTAAAACCTACACTATT
ACACCTTAAAACCTACACTATAACACCTTAAAACCTACACTATAACACCT
TAAAACCTACACTATTAGACGTTAAAACCTACACAATTACACCTTAAAAC
CCATACTATTTTTTAGAAAACTATATATATAACTCATTGATTAAAATGAA
GAATAAAACAAATATGCAATAAACTATAAAGTGACTGCAAAAAAGGAATG
ACAGGTAAGACAGGAAAAACAAAACAAAACAAAACCATACAAAGAAAACG
ACCCAGAGACTTTAGCATAACCTTGCCGTCACGCCGGGCTGAAAGAAAAC
ACACGGAATACTCATGCGATAAATGATAAAAAGTATAAAAATTAATAGAA
ATTTGATTTGCATTAAATGTTCTGGTTTAAGTTATTTGCCATTTCGGCGA
AATCAACATCAGCCATCTCGATGGAGTGTTGATTCCTTCGTGTTCCTCTN
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NNNNNNNNNNNNNNNNNNNNNNNNGCTGGAGTGTCTTCTTGCTTTTTCAT
ACATTTGTTTCTGTGTCTTGTCCTTCCACCTTTGTTTTGAAATTCTTTCC
CACAAAAATCGCATGAATATGATCCCGGTTTGCTCTGCGTTGCTTGGGAC
AAGGGGATGATCTTGTTGTTTGGTGGTGATTTTTCTTGTTCTTGCTGTCG
AGGTCTCGCTACCGCTTCAGAGAATAGCTGAAAGAACGATTTCGCTGGTT
GTATCGCCTTTGTTGAGGAACAAGCAAAACTTTTCATATTTTCAGCTGTC
TTCAGGCCTGGACCAGGTGTTGATTGGTCACAAGTCTCATCTTTTTCACA
TCCTGTCGCCATTTCGAAAGCAAGCAAAACAGGGCAAAGTGTGGTGTATT
CTAGACTCTTCACTCGTTCGACGAGACGCGTCTACCTCCTGGCCGCAGAG
GATTTTTCTTCGGGCTTAATATTCGAGCCTGTCAGTCCAACCGACCCTCT
GCACCCTTGACTGCGGGCGTCTTTTCTTCGAGGTACACGTTCGCCCTCAC
ACTCACGCTACCTTGACTGCGGTAGTCTTTTCTTCAGGGTTTTTCGACCT
TGTCTAGCACCACTTCTGATTGTGTCGGGATAGATGTTTTGCGAAAAAGA
AGGCAGGTTCTGCTTGTGACACACGGAAGACTTTGGTTGTATCACGACGC
TTTCTTGAAGATTTCTTTCCGATATTCCAGATTTTAAACTCTTCTTGGTT
TTCTGTTCTCACCGGATTCTTTTCTTCTCCGCAACATGACCGTCCTACAC
TATTAGACGTTAAAACCTACACTATTACACCTTAAAACCCATACTATTAC
ACCTTAAAACCTACACTATAACACCTTAAAACCTACACTATTAGACGTTA
AAACCTACACAATTACACCTTAAAACCTACACTATAAGACCCTAAAACCT
ACACTATTACACCTTAAAACCTACACTATAACACCTTAAAACCTACACTA
TTAGACGTTAAAACCTCCGGGATTACACCTTAAAACCCATAATATTACAC
CTTAAAATCTACACTATAACACCTTAAAACCTACACAATTACACCTTAAA
ACCCATACTATTACACCTTAAAACCTACACTATTACACCTTAAAACCTAT
ACTATTACACCTTAACATCTACACTATTACACCTTAAAACCCACACTATA
ACACCTTAAAACCCATACTATTACACCTTAAAACCTACACGATTACACCT
TAAAACCTACACAATTACACCTTAAAACCTACACTATTAGTACTAGTAAT
CGTATGGTTTGGAGTGCAATTAACGATTAATCACGAGTAACAAAGGAGAA
AATAGTAATTTGCACGAGTCCGAAGGACGAGTGCNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNAGCTATTGTAACGTAAAATTTCTTTG
TTCTTTTTTTTATATTGAAGAAAAAAAATGTCTTTGTTTTTTATTATATA
GTAAAAAAAAGTATCTGACATAGAACTTGGGAGAGAAAAGAATAAGGGGA
CAAAAGTGTCCCCCCGCCGAAGAGTGCAAAAAGTGGTAATAGTGCAATTA
ACGATTAATCGCACTCCTCTAAACCAATCAGATTCGAGTAATTTTGCACG
GCTGACGATTACACCTTAAAACCTATACTATTACACCTTAAAACCTACAA
ACATTGACCCCTTGCTCACAACTAACTGTGAAGTAGCAATTCAGGTGATG
AACCGTGATTCAATCAAATACTTGCTCATTATCAAATTTGTGACATTTTG
GTATGCAATATGACCATATGTTTTTAGAAAGTCGATTTTCAGATTTTATT
GGCCACCACCATAAATGAGCTTTAAAGTAAAACTTTGAGGGTCTTACGAT
TTCTTTGGGGTCTAACAATGAAAAAATAATTTTTTTCATACCTACCATAT
AGTACCTGTATAGGTACCTAAAAAGTGTAGGTTTTTGACCTTAAATTCAA
TTGTGTAATCTCTGGGTCCGAAAAACTTGATTTTTTGAAGCGGTTTTAAT
AAAATTTTGAATAACTTCGAATTTTACGACACTTTTCAATAATTGAAATT
CTCAAAACTAGATATTTTATGATTCATGAAAGTACATTTATAAGGTTGTA
AAAAGGTGAATTATACAATACATTAAATTAAATTTGGTGGTTAAGAGAGC
CCAAAAATTTCTAGGTTTTAAAGAGACATAAAAGTAGTAAAATGTAAACA
TTGTGCGAACCACGTGTCATTAAAGAGAACAATTAAAATCACGTGTCCAA
AACAAACTTGTAAAACAATTGCGATACAATCAAAATCAGCCATATTTGTT
TCAATTTTTCATTTTGACATGTGACATGTGTTTTGATTTTGTATCCCGCT
GCATACGGTTTGCTTACAAATTTCGTCAGTACTTTTATGTCCCTTTAAAA
GGTATTCACTGGTACAAAACTGCTATATACCTTAAATTCTATCAAAAGTT
ACAGTTTCTTTGTCTCCACTGCAGATTATATTGAGGACGGGCTTGAATAA
ATCTTTCAAAATTCATTAAAATCTTTTTTAAATCCATTTATCATGTCGCT
TTTTGAACATGATTTACTTTTTCTTTTATAAGAACAATTTTAAAAGAACA
ATGAGGCTCAAAATCAGCGAAAAATAAGAACAATATTATAAGAACAATGC
TGAGCCTAGAATTATACAATTTCGGGGTCAAAGTAGTAAAAATTGAGTAC
AAATCCTAAAATACTTCAATTTCTTCATCCTATAAAGAAGAACGTCAAGA
TAAGAACAATTTGAGACTTAAAATGCCAAAAAAGTAAGAACAGTCTCGCC
TCATTAAAAATTTACTGGTGTTCTTATAAATAAAAAAGTGTATCTTTCTC
ATTTCTTTAGTTCAAAATGGAACTACGATGGAGGAAATGTTACAAAACAT
TATACCAATGCAAGGAGATAATTGGCAAGTAACTTTCAAAGCCACTCGCG
ATGCTACGAAATCCGGAGGCAGAACATTCTTACGGCTAACCTCGTCACCG
ATAAATAAGAATTATTCAGAAGGTCACGCAGCACTCGTTGTAAGTTCATA
GGATTCGTGCATCTGTTACATACTATTTTCAATTTTCAAAGGGGAAAATG
CACAAATCTGTGCAGATCTTCTTTCGAGAAAAATGCTGAATTACAGAAAC
GCTTTAAATTTGAATATTTCTATAACCTCAAAATTTCAGGTCAAATACAA
TAATGCAGGTATTCTAATTCGAACTCCGATAAACAATGATGTCCATTTTA
CCGTAAGTTTCTTTTTACCTGGAGATCAAGAAGTGGATATGAAGATTGTG
AAATATGCTTGTGACGGATGCCCAGTCAGATTCAAAGCATTTGTGGATAA
CGTAGAAAAAGTTTCGTTGAACACCACTTCGACTGTTTGGTATAATGTCA
GCTGCTTTGCTCCATGGTTTAATGATGATATTGACAAAACGACTGATTTG
AAATATACATCGAACCCACCGTTATTTCGTAAGTTTATTCCATCCCAGCT
GGCACACAACGTTGTTTCAATGTTCATCTAACGTTATATGGACGTTATGA
ACATCAGATAAACGTTGAAACAACATTGTGTGCCAGCTGGGATAGTCTCG
TATTTGCACTTTTGAGGACCTTAAAGTGACTGAAGCAATTTGGAACAACC
CGCAGTTTTGACCCTTGAAAAATGGAGGGAGTGCTGATTAACCGTCGTCC
TCAGTCACTCAGGAGGTAGAAAAAGTAGAAGCTGTCGCTGAAAAACACAC
ATAATACATAATCTGGCTTGTCTCATTCAATAGTCCCGTGAGGCAGTGGC
GATTCTGAAGGGGGGGGCAAAATTTATGACGGAGATTGTAAATGTTCGTT
AAAGTCCTCTTAGCCCCGCTACTAGGATAGTCAGCAAATATGAATATAAG
AATATCCCTGTCTCACAGTCCCATGGAACGTACTTATTTCCATAGTTGGT
ATGATAGTTAATGTATAATCTGTAGTTCCTAGGTCTGAAAATTCAGTGGG
CATGGTTTAAGATTGGATTTTTTTTATTCATTGATGAATTTCAAATAGCT
ATGAAAACAAAGACAAGTTTGTAAATTAAAGTTTTGTGAATTTATGAAAC
TCGTAATTGTGTTTCGAGTTGATACTTTTTTTACGAACACCCTGTACAAG
TGAACAAATTATTTGTTCCCCTTTTCTGAAAGGGGATAATCAGATGGTTT
GAGATATTTAGATTATACAGAAACCTTCCGTGGCCTCAAAGTGTTTTTGT
GTAACAATTTTTCAAAATCGAGTTATCAAAATTTGAAATTTTTGAAAATG
GGTTCTAACGCGGTTCTTACGTTGAAATTTTATTACTTTTCATCCTAAAA
GCCAAAACCTTGTAACTTAAATATCTCGATTTTGAGACTTTGCACAGGAC
AATAGAATGATCTCACATGCTACATATTACAAACCATCTGGATATCCCTT
TAACCAACTAGGGAATTTCAATCTAATGGAGTTTTTATTGTGAAATTTCT
AGCCTCCATTATAAAAAGGATATCTTTTTTTTGTTGAGCTATATGCTGAT
GAAGTCACGAAAGATGACGAACATTTCAACATTTTTCTGTTATATAAATT
GCTGCTTTTACATTTCATGTTTTCCTTTAAACAACCATAGGCGGCGAACA
GTCATTCAAGCCTACTACTTTATTAGCAACACTTCCATCATGGCCCAATG
CAAATACACCCTTCCATGTATCCTTCAAAATCAAAATTGTCGCATGGTTG
AACAATTGGCATCCGATTATAAATTTTCACAACAATGATGGAGCAGAAAC
TCGGCTTCCAACTTTCTTTTTCACTGCTTATAGGGTATTGAGTGTTTTGT
TATTTTGTTAATTTTAGCATCTTTATTATACAGCGGAGTCTGTTCAACTC
GAACTTCTATTACTCAAATGTCTTCTTAATTCGAACACCCTTTACCCAGT
TGGCACACAACGTTGTTTTGACGTTCATCTAACGTTATATGGACGTTGTG
AACGTTAGATAAACGTTGAAGCAACGTTGTGTGCCAGCTGGGTATGGTCT
CTTCAGTTAAAGATGCCTTATAAAGCAATCTTCACCTTAACTCAAAATTT
CCGTATTTCGAACAAATTTGTGTTCCTCGTGCGTGTTCAAGTTATGGAGA
CTCCACTGTATAATAAAAAATCTTTCCTCTTGCAGTTAAAGAAATTATTG
ATTCATTGACAGACAAGTAAATGGGCTATCGTACCATTTCACCCGGGGGG
GGGTGTCGGGGTCTCTCTAAGGCTTGGAAAAATGAGAAAGTTTAAATTAG
TCTCTCTAAGGGTCTGAAAATTCACGACTTTAGGAAATTTTTTTAATTTC
AAGTGAAAAAATTGTAAAAAAGTCTCTCTAAGGGTACCACTCTTTTCAAA
AATCGAGAAGAAAATTTTTCAAATAAGTATCTCTAAGGGTCAGTTTTAAA
TCTTAAAACCCTTAAACAACATCTCACATAAATATTTTGATTTTTCTTGG
GTATTTCGGCGTCGAAAAACATTATTGGTTTCTTCAATCTTTTAGATTGT
TGGATCGTATAAAACCGGTGCTGCTAATTTTAATAACATTGGAATCGTGC
CAACTTCTGACATCACATTGAATGAGTTCCACGAAGTTCGCTTGGAACAG
ACGATTGACGCTAACGGTGTTGGTTTTATCAGATTTTATTTCAACAATCA
GCAATTTGGATCTGCCGAACGAAACTATAACCAAGCGACACCTTTTACAG
ATGTACACGTTAAGATTCATTACAGCAATGGTTTTGATTTTGTCATTAAA
GAATTTGATTATAGTGGAAGTGATTAGTCAAAAACCAAAGTTTCTCGCAA
TAAATATGTACAATAATTATATAAGTACAATAGATCGTATTAAATACAAC
GTTAACATGGCGTTCGCTTGGAACAGACGATTAACGCTAACGATGTTGGT
TTTGTATTTAATGTACAATCAGCAATTTGGATCTGCCAAACAAAACTATA
ACCAAGCGACGCCTATACGAGAACAATAATTGGAGCCAAATCTTATATGT
AAATGTAGCGATGCACGTAAAACAACATAGGAAAAAGCAATTTGTTAGCA
ATCCGAATTTTAAAACAAATTACACGCTTGTTTATAAGCACCAGTAAATT
TTGGCTCAGACGAGGCTGCACTTAAAATTGCACTTAAAAATCATTCCACT
GGATTTGTTAAAGATTTTTTTTTAAATAATAGTGATATGCTTAACCATCA
ATTTTAACTTTCAAGCTTTTTCATATTGGATTGACACGGATGTGGAGCAA
GATTGGTCAGAAAGAGGAAAAATAACGTTTTTTGCTTATCAGCAAAATAT
AACAATAGGCAGACACTGTCCTGATATGAAATATGTGTCTAATATGAAAA
GGGAGCACTAAAAATAAAACTTTCAACCATAAAAACCCTGGTCTGGAAGC
CTTTTGTTTCTTTCCATTGTTTCTTACTTGAACTTGCGTTGAGAAATTAG
TTTGTTTTGCTCACTTTTTGATCATGTGATTAAATCTTAAACCAATCCCA
AGAGGAGTACTTGGTAACGTGATCAAAAACTGAGCAAATCATCTTTTGAT
AATAACAAAGGAAAAAGCTAACAAAAAGTTAAAACAATAAGCTTCCAGAC
CAGTGTTTTTTATAAGAACTATGCTTTAACCTTGGAACATAGAATTTCTA
TCCCCTTTGTGATTTCATTCGGAATCTTTATCCCCACTGTGGGAAAAAGC
TTCACCGGGACTGTGAGACAGGGCTGTATTTATGTCTGATTCTCATTACC
TTGACCTTTAAGATGTTTGAAATTTCATTCGATTTCTGGCTTAGCATTGT
AAAATAATTTTTTTTTTAAACGATTTTAAAAGGTTTCGTTTAAATAAAAG
TGATATCGTTTGCTTACTGATCAATTTTCATTTACAAACTTTTTCGTCAC
ATGGGATTAGACACGGATGTGGAGCAAGATTGGTCAGAAAAAGGAAAAGA
AAAACATTTTTTGCTTATATCAGAATAATATAACGATAGGAAGACACTGT

Coding sequence (CDS) from alignment at scaffold_132:124770..139469-

>TCONS_00047582 ID=TCONS_00047582|Name=TCONS_00047582|organism=Clytia hemisphaerica|type=CDS|length=4980bp|location=Sequence derived from alignment at scaffold_132:124770..139469- (Clytia hemisphaerica)
ATTGTTGGATCGTATAAAACCGGTGCTGCTAATTTTAATAACATTGGAAT
CGTGCCAACTTCTGACATCACATTGAATGAGTTCCACGAAGTTCGCTTGG
AACAGACGATTGACGCTAACGGTGTTGGTTTTATCAGATTTTATTTCAAC
AATCAGCAATTTGGATCTGCCGAACGAAACTATAACCAAGCGACACCTTT
TACAGATGTACACGTTAAGATTCATTACAGCAATGGTTTTGATTTTGTCA
TTAAAGAATTTGATTATAGTGGAAGTGATTAGGCGGCGAACAGTCATTCA
AGCCTACTACTTTATTAGCAACACTTCCATCATGGCCCAATGCAAATACA
CCCTTCCATGTATCCTTCAAAATCAAAATTGTCGCATGGTTGAACAATTG
GCATCCGATTATAAATTTTCACAACAATGATGGAGCAGAAACTCGGCTTC
CAACTTTCTTTTTCACTGCTTATAGGGTCAAATACAATAATGCAGGTATT
CTAATTCGAACTCCGATAAACAATGATGTCCATTTTACCGTAAGTTTCTT
TTTACCTGGAGATCAAGAAGTGGATATGAAGATTGTGAAATATGCTTGTG
ACGGATGCCCAGTCAGATTCAAAGCATTTGTGGATAACGTAGAAAAAGTT
TCGTTGAACACCACTTCGACTGTTTGGTATAATGTCAGCTGCTTTGCTCC
ATGGTTTAATGATGATATTGACAAAACGACTGATTTGAAATATACATCGA
ACCCACCGTTATTTCTTCAAAATGGAACTACGATGGAGGAAATGTTACAA
AACATTATACCAATGCAAGGAGATAATTGGCAAGTAACTTTCAAAGCCAC
TCGCGATGCTACGAAATCCGGAGGCAGAACATTCTTACGGCTAACCTCGT
CACCGATAAATAAGAATTATTCAGAAGGTCACGCAGCACTCGTTGTGAAG
AAGCACAAAGTTATTCCTTCCGCACAAGATTTTGAAGTGAAAGAAGATTG
TTGGATCGTATAAAACCGGTGCTGCTAATTTTAATAACATTGGAATCGTG
CCAACTTCTGACATCACATTGAATGAGTTCCACGAAGTTCGCTTGGAACA
GACGATTGACGCTAACGGTGTTGGTTTTATCAGATTTTATTTCAACAATC
AGCAATTTGGATCTGCCGAACGAAACTATAACCAAGCGACACCTTTTACA
GATGTACACGTTAAGATTCATTACAGCAATGGTTTTGATTTTGTCATTAA
AGAATTTGATTATAGTGGAAGTGATTAGGCGGCGAACAGTCATTCAAGCC
TACTACTTTATTAGCAACACTTCCATCATGGCCCAATGCAAATACACCCT
TCCATGTATCCTTCAAAATCAAAATTGTCGCATGGTTGAACAATTGGCAT
CCGATTATAAATTTTCACAACAATGATGGAGCAGAAACTCGGCTTCCAAC
TTTCTTTTTCACTGCTTATAGGGTCAAATACAATAATGCAGGTATTCTAA
TTCGAACTCCGATAAACAATGATGTCCATTTTACCGTAAGTTTCTTTTTA
CCTGGAGATCAAGAAGTGGATATGAAGATTGTGAAATATGCTTGTGACGG
ATGCCCAGTCAGATTCAAAGCATTTGTGGATAACGTAGAAAAAGTTTCGT
TGAACACCACTTCGACTGTTTGGTATAATGTCAGCTGCTTTGCTCCATGG
TTTAATGATGATATTGACAAAACGACTGATTTGAAATATACATCGAACCC
ACCGTTATTTCTTCAAAATGGAACTACGATGGAGGAAATGTTACAAAACA
TTATACCAATGCAAGGAGATAATTGGCAAGTAACTTTCAAAGCCACTCGC
GATGCTACGAAATCCGGAGGCAGAACATTCTTACGGCTAACCTCGTCACC
GATAAATAAGAATTATTCAGAAGGTCACGCAGCACTCGTTGTGAAGAAGC
ACAAAGTTATTCCTTCCGCACAAGATTTTGAAGTGAAAGAAGATTGTTGG
ATCGTATAAAACCGGTGCTGCTAATTTTAATAACATTGGAATCGTGCCAA
CTTCTGACATCACATTGAATGAGTTCCACGAAGTTCGCTTGGAACAGACG
ATTGACGCTAACGGTGTTGGTTTTATCAGATTTTATTTCAACAATCAGCA
ATTTGGATCTGCCGAACGAAACTATAACCAAGCGACACCTTTTACAGATG
TACACGTTAAGATTCATTACAGCAATGGTTTTGATTTTGTCATTAAAGAA
TTTGATTATAGTGGAAGTGATTAGGCGGCGAACAGTCATTCAAGCCTACT
ACTTTATTAGCAACACTTCCATCATGGCCCAATGCAAATACACCCTTCCA
TGTATCCTTCAAAATCAAAATTGTCGCATGGTTGAACAATTGGCATCCGA
TTATAAATTTTCACAACAATGATGGAGCAGAAACTCGGCTTCCAACTTTC
TTTTTCACTGCTTATAGGGTCAAATACAATAATGCAGGTATTCTAATTCG
AACTCCGATAAACAATGATGTCCATTTTACCGTAAGTTTCTTTTTACCTG
GAGATCAAGAAGTGGATATGAAGATTGTGAAATATGCTTGTGACGGATGC
CCAGTCAGATTCAAAGCATTTGTGGATAACGTAGAAAAAGTTTCGTTGAA
CACCACTTCGACTGTTTGGTATAATGTCAGCTGCTTTGCTCCATGGTTTA
ATGATGATATTGACAAAACGACTGATTTGAAATATACATCGAACCCACCG
TTATTTCTTCAAAATGGAACTACGATGGAGGAAATGTTACAAAACATTAT
ACCAATGCAAGGAGATAATTGGCAAGTAACTTTCAAAGCCACTCGCGATG
CTACGAAATCCGGAGGCAGAACATTCTTACGGCTAACCTCGTCACCGATA
AATAAGAATTATTCAGAAGGTCACGCAGCACTCGTTGTGAAGAAGCACAA
AGTTATTCCTTCCGCACAAGATTTTGAAGTGAAAGAAGATTGTTGGATCG
TATAAAACCGGTGCTGCTAATTTTAATAACATTGGAATCGTGCCAACTTC
TGACATCACATTGAATGAGTTCCACGAAGTTCGCTTGGAACAGACGATTG
ACGCTAACGGTGTTGGTTTTATCAGATTTTATTTCAACAATCAGCAATTT
GGATCTGCCGAACGAAACTATAACCAAGCGACACCTTTTACAGATGTACA
CGTTAAGATTCATTACAGCAATGGTTTTGATTTTGTCATTAAAGAATTTG
ATTATAGTGGAAGTGATTAGGCGGCGAACAGTCATTCAAGCCTACTACTT
TATTAGCAACACTTCCATCATGGCCCAATGCAAATACACCCTTCCATGTA
TCCTTCAAAATCAAAATTGTCGCATGGTTGAACAATTGGCATCCGATTAT
AAATTTTCACAACAATGATGGAGCAGAAACTCGGCTTCCAACTTTCTTTT
TCACTGCTTATAGGGTCAAATACAATAATGCAGGTATTCTAATTCGAACT
CCGATAAACAATGATGTCCATTTTACCGTAAGTTTCTTTTTACCTGGAGA
TCAAGAAGTGGATATGAAGATTGTGAAATATGCTTGTGACGGATGCCCAG
TCAGATTCAAAGCATTTGTGGATAACGTAGAAAAAGTTTCGTTGAACACC
ACTTCGACTGTTTGGTATAATGTCAGCTGCTTTGCTCCATGGTTTAATGA
TGATATTGACAAAACGACTGATTTGAAATATACATCGAACCCACCGTTAT
TTCTTCAAAATGGAACTACGATGGAGGAAATGTTACAAAACATTATACCA
ATGCAAGGAGATAATTGGCAAGTAACTTTCAAAGCCACTCGCGATGCTAC
GAAATCCGGAGGCAGAACATTCTTACGGCTAACCTCGTCACCGATAAATA
AGAATTATTCAGAAGGTCACGCAGCACTCGTTGTGAAGAAGCACAAAGTT
ATTCCTTCCGCACAAGATTTTGAAGTGAAAGAAGATTGTTGGATCGTATA
AAACCGGTGCTGCTAATTTTAATAACATTGGAATCGTGCCAACTTCTGAC
ATCACATTGAATGAGTTCCACGAAGTTCGCTTGGAACAGACGATTGACGC
TAACGGTGTTGGTTTTATCAGATTTTATTTCAACAATCAGCAATTTGGAT
CTGCCGAACGAAACTATAACCAAGCGACACCTTTTACAGATGTACACGTT
AAGATTCATTACAGCAATGGTTTTGATTTTGTCATTAAAGAATTTGATTA
TAGTGGAAGTGATTAGGCGGCGAACAGTCATTCAAGCCTACTACTTTATT
AGCAACACTTCCATCATGGCCCAATGCAAATACACCCTTCCATGTATCCT
TCAAAATCAAAATTGTCGCATGGTTGAACAATTGGCATCCGATTATAAAT
TTTCACAACAATGATGGAGCAGAAACTCGGCTTCCAACTTTCTTTTTCAC
TGCTTATAGGGTCAAATACAATAATGCAGGTATTCTAATTCGAACTCCGA
TAAACAATGATGTCCATTTTACCGTAAGTTTCTTTTTACCTGGAGATCAA
GAAGTGGATATGAAGATTGTGAAATATGCTTGTGACGGATGCCCAGTCAG
ATTCAAAGCATTTGTGGATAACGTAGAAAAAGTTTCGTTGAACACCACTT
CGACTGTTTGGTATAATGTCAGCTGCTTTGCTCCATGGTTTAATGATGAT
ATTGACAAAACGACTGATTTGAAATATACATCGAACCCACCGTTATTTCT
TCAAAATGGAACTACGATGGAGGAAATGTTACAAAACATTATACCAATGC
AAGGAGATAATTGGCAAGTAACTTTCAAAGCCACTCGCGATGCTACGAAA
TCCGGAGGCAGAACATTCTTACGGCTAACCTCGTCACCGATAAATAAGAA
TTATTCAGAAGGTCACGCAGCACTCGTTGTGAAGAAGCACAAAGTTATTC
CTTCCGCACAAGATTTTGAAGTGAAAGAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_030308XLOC_030308Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00047582-proteinTCONS_00047582-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00047582-exon-scaffold_132-1575043694:139418..139469TCONS_00047582-exon-scaffold_132-1575043694:139418..139469Clytia hemisphaericaexon
TCONS_00047582-exon-scaffold_132-1575043694:128781..128959TCONS_00047582-exon-scaffold_132-1575043694:128781..128959Clytia hemisphaericaexon
TCONS_00047582-exon-scaffold_132-1575043694:128342..128630TCONS_00047582-exon-scaffold_132-1575043694:128342..128630Clytia hemisphaericaexon
TCONS_00047582-exon-scaffold_132-1575043694:126986..127179TCONS_00047582-exon-scaffold_132-1575043694:126986..127179Clytia hemisphaericaexon
TCONS_00047582-exon-scaffold_132-1575043694:124770..126274TCONS_00047582-exon-scaffold_132-1575043694:124770..126274Clytia hemisphaericaexon
TCONS_00047582-exon-scaffold_132-1510915933:139418..139469TCONS_00047582-exon-scaffold_132-1510915933:139418..139469Clytia hemisphaericaexon
TCONS_00047582-exon-scaffold_132-1510915933:128781..128959TCONS_00047582-exon-scaffold_132-1510915933:128781..128959Clytia hemisphaericaexon
TCONS_00047582-exon-scaffold_132-1510915933:128342..128630TCONS_00047582-exon-scaffold_132-1510915933:128342..128630Clytia hemisphaericaexon
TCONS_00047582-exon-scaffold_132-1510915933:126986..127179TCONS_00047582-exon-scaffold_132-1510915933:126986..127179Clytia hemisphaericaexon
TCONS_00047582-exon-scaffold_132-1510915933:124770..126274TCONS_00047582-exon-scaffold_132-1510915933:124770..126274Clytia hemisphaericaexon
TCONS_00047582-exon-scaffold_132-1491911889:139418..139469TCONS_00047582-exon-scaffold_132-1491911889:139418..139469Clytia hemisphaericaexon
TCONS_00047582-exon-scaffold_132-1491911889:128781..128959TCONS_00047582-exon-scaffold_132-1491911889:128781..128959Clytia hemisphaericaexon
TCONS_00047582-exon-scaffold_132-1491911889:128342..128630TCONS_00047582-exon-scaffold_132-1491911889:128342..128630Clytia hemisphaericaexon
TCONS_00047582-exon-scaffold_132-1491911889:126986..127179TCONS_00047582-exon-scaffold_132-1491911889:126986..127179Clytia hemisphaericaexon
TCONS_00047582-exon-scaffold_132-1491911889:124770..126274TCONS_00047582-exon-scaffold_132-1491911889:124770..126274Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_132supercontigscaffold_132:124770..139469 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.340004	0	0	0	0	0	0	0.368861	0.256274	0	0	4.22298	4.63407	1.88771	1.93257	0.700116	2.2169	7.34959	4.89286	6.40346	4.59359	0.467551	2.25946	3.00134	4.47425	0.485973	0	2.36385	1.81108
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00047582 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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