TCONS_00047587 (transcript) - C. hemisphaerica

Overview
NameTCONS_00047587
Unique NameTCONS_00047587
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1881

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00047587 ID=TCONS_00047587|Name=TCONS_00047587|organism=Clytia hemisphaerica|type=transcript|length=1881bp
AGGATGGAAAACAACGGTACCGCAGAGACCTAGAGGAAAATGAGGAAGAA
GATATTTggcgtttcattttcaatagaGAGAAGTTTACGAAATTAATTCG
GAGGATATCGAACGAAACATACCAAGACGAGATTATTCGATCGTTGGCAA
AATTTGTTCCGACTGAACGACTTTGTAAAGATTTTGTGGAGAATTGTCGA
TCGAAGGAATTCCAggaaaaagattacatcatcaAAACAGAACACAGTAA
ATCTGGCCTGGAATCTGAGAAAAATAGGAAATTTCTTCGAGGCCCTCCAG
GACCACCAGGACCTCCGGGACCTCAGGGACCTCGAGGACCAGGTCTAGAG
TCACCAAAACTTGTTTCAAATTCCTTGAATCATGGATTAGTTAATATCAC
TAAATCAAAGACTTTCGAGTGTGTTTTTTACGGAAACCCAATACCAGAAG
TCTCTTGGGAGAGTTCtgcaaaagattttgaaatatcttCTGTTCTCAAC
AAGGAAAAATCCGAAATCAAGACTCAGTTGGTCGTCTACAATACAAGTTG
GTCTGACCAAGGTCCTGTCAAATGTTCAGCTAGAAGTATCCTTGGTGAAG
CTTCACATTCTGGGAACCTTACCGTGTTGTCTAAACCAGTTATTCAAAAC
CAAAAGACTTTGGTCTTTGCACCGCAGGGGATCAACTTTAGATTCCCTCC
TTGTGAAGTTCGTTCAAATCCACCAGCCAAAATCACATGGAAACGTATAT
TTTGGTCGATGCCTGCAGGACGTTTTGAAGTTCAAGCGAACACTTTGACG
ATTggaaatcttcaattttctgatGAAGGGTTTTATGTTTGTGAGGCTGA
GAATTTCTTAGGCAAAGATAAAAGCACGTTACAACTCaaagtaaaagctt
ttgaaatgcaaaaaacaTCTGTCTCAAGCATCAACATATATCCTAGTGAG
ATTGCCAACATCAGTTGTTCTGCTCTTGGAAATGCTGTCAAAATGGACGG
GAAAATCACAAAGGCAGGAGCTGCAGTGGACTATAAGGTAGATCGTTCGG
CAGACAATAACACGATTACTGTGATTGCAAGTGTCAAAGAGAAGGGGGCC
TACGTATGCTCGATTTCCAATGCAGAAGAAACACTTGAAGTCGCTGTCTT
AGTTCACTATGTCGAGTTGGGTGCATGGAGCAGCTGGTCATGTAATTGTG
AAAgtcgaaaaaaaacaagaaatagAATCTGCAAGAATGAATCTCCAATG
AAAAAATGTCGTGCTCAGAAAAAGGAAACAACCAGTTGCATTTGCANCAA
AATGAATCTCCAATGAAAAAGTGTCGTGCTCGGAAAAAGGAAACAACCAG
TTGCATTTGCACATGCAAAAATGGttggaaaaagaaatcaaacCCGTTGT
TATGCTGACATCACTGTTAGAAATACATGGAACAACGCAGAGCTATTTTG
CCAAAGCAGAGGTGGACATCTTGCAAGCATATCAAATAGTGCAGAGAAGG
ATAACGTCTACAATACTTATGGTGGTAAGCCAAATGTCTGGATAGGTTTA
TCTTTTGAAACCGAATGGCAATGGAGTGATGGAAGCCCTGTTGTTTATTA
TAAtaatcttcaaaagtcgagatcTGGTAATGGTAGAAAGGAATGTGTTT
CATTCGATGCTGGTGGAAGCTTGTGGGCTCTCCAAAATTGTGATCAAAGA
TTTATCTTTGTTTGTGAAGCATCAATGCAAGACAATCTTCCTATATAGCG
CTTAAGACTCGCAAAGCATTGACGCTAGATCACAAATCGaatgcattttg
aaatgtcGCACAAAATTCAATAAGAAGAATGGGTTCTACACTGAGGATAA
TTTATGCTTTTGTTCAAATGGGAATTTTGAG
Run BLAST on NCBI

transcript from alignment at scaffold_132:139807..151941-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00047587 ID=TCONS_00047587|Name=TCONS_00047587|organism=Clytia hemisphaerica|type=transcript|length=12135bp|location=Sequence derived from alignment at scaffold_132:139807..151941- (Clytia hemisphaerica)
AGGATGGAAAACAACGGTACCGCAGAGACCTAGAGGAAAATGAGGAAGAA
GATATTTGGCGTTTCATTTTCAATAGAGAGAAGTTTACGAAATTAATTCG
GAGGATATCGAACGAAACATACCAAGACGAGATTATTCGATCGTTGGCAA
AATTTGTTCCGACTGAACGACTTTGTAAAGATTTTGTGGAGAATTGTCGA
TCGAAGGGTAAGCAATTATTATTATCCACGGTTGATTCTTTCTTCGTCAA
CCTTTTTTGAGGAAGCCACTGTTTTCGAAAGTCCGTTTTTAAAAAGTACT
CGAGTCTCGAATAAATTGTTTGCTTTATTTAGTGTAATTAGTATTCACGA
AATATACCATGAAAACAGGATCTGATTGGCTGAAAACTGTTCGTTTAAGA
ACACATACCCAATCAGTGAGCTTGTTTACGTGATATATTTTTAGTTCACA
TTTCACTGAATCAAAACAGACAGCCAATTCGTAACCCGTGAAAAATCTCT
GAGCATATTGAATTTTTCATATTTGGCACGTGTGAAACGCGAAGTTCTGC
CTGATGAAGCCAACAAAACTTTGGCGTGGTATACTTTTTCTGTTAGGCCA
ACTATCCTCAAGTCTGAAAATTAAAAATTGCAATGAAAAGATTTGATGTT
AAGAAGAAAATGAAGACTTATACGAAGAGTATTTCAACTTTGAAAACCTT
ATTTCAGCAATGAAAAAACATTTGGTTAGCTTGATATAACCACGATTTAA
ATGATTTTAAATGATCTTTTCCTCTCTCGGAGATGAAAAGGCGCTTGCTA
TGTCAACTGTTGAATAAATTTTCAAGCAGGGATCAAAATCGACTCGTTTT
TTATAAGAGCCTCCAAAATTTTTGAAGCCTTGGGATGTTCTTAATATGTT
CTTATTTTCGCCATTTTTTGAGTATTTTTGCCCCTTCTCCTAAAAAATTC
AGTGTTCTAGAGTCCGCGAAGCCTTATAATGTTCTTAACATTTTAGCCAT
CAAAGCCTTATGTTCTTATATAGTTCTTGTATAAAAAAACGAGTATTTTT
CTTTCAGCAGAATTCCAGGAAAAAGATTACATCATCAAAACAGAACACAG
TAAATCTGGCCTGGAATCTGAGAAAAATAGGAAATTTCTTCGAGGCCCTC
CAGTAAGTTCCATTTTAATAAATTGATTCTCATCTCCTCAGTCAGTGTGT
GTATGGAACTTAAAATCTAATCTACAATCATGGATAAAAAATATTTGAGA
CAAAGGGGTTATCCTGGCGAAATTTTAAAAACCACAAATGATTTTTAAGT
GCAGCTGGAAAGTAGAGTATTAACTATGAGTTTTAACACGAGACTTAAGA
CTTAGGAGGACCTTAGGATCAAGAGGACCTTAGGATCTCAGGATTTAAAA
GCTCAAATTTGCTCGAATAAGGCTTGAAATATAGCCTAGAAGCCACCGAT
TCCCTCTTAACTCGAAATATTCAATAAAAGAAAGTGGAAGTGCTAAAATA
GCAGTTCTCGCCCAAACTTTAAATTCTGAAAAACGTTAGAATACACTAAA
ATGTCTCGGCCATAATTGAAGAAAATCAGTCTTTTGGGGGTAGGTAAGTG
TGCTGCGTAGTGGGACGGGTAAAAGATAGTTGTGAGTGGGTGCTGATTAA
ATCTTTCAGCCCGATCCATTTACAAGTTTTCTCTCTACGCTTACCTAACC
CCGACGCTCACTTACCTCCCGTGAGACATCGTTTCAGCCCGAATGCGTGC
CAGTCTATTTATATAATCGAGAAATTTCATTTCGGGTCATAGCAGAAAGA
TGTACTGGACATTTATTTAATAGGAAACAAATCTGTTCATTATTATCTCC
CAAGAATTTTGATTTTGATTATGAAAACATTACCATTCATTTTTAGGGAC
CACCAGGACCTCCGGGACCTCAGGGACCTCGAGGACCAGGTCTAGAGTCA
CCAAAACTTGTTTCAAATTCCTTGAATCATGGATTAGTTAATATCACTAA
ATCAAAGACTTTCGAGTGTGTTTTTTACGGAAACCCAATACCAGAAGTCT
CTTGGGAGAGTTCTGCAAAAGATTTTGAAATATCTTCTGTTCTCAACAAG
GAAAAATCCGAAATCAAGACTCAGTTGGTCGTCTACAATACAAGTTGGTC
TGACCAAGGTCCTGTCAAATGTTCAGCTAGAAGTATCCTTGGTGAAGCTT
CACATTCTGGGAACCTTACCGTGTTGTGTAAGTCTCTTGTATTATTTTAC
TTCCTATTCTCTCTTCCTGCGCGAATGCCATGCTAAAGCTGAGCTACAGT
CCAACCTCTAATTTGCAGACACTATTAAAGAGGTAAAGTAGTGTCCACTT
TTTACATACTGGGCCGTCTTTTAGTGTTTTTTTAGTGGTTAATTTGAAGT
TTTACTGTAATGGAACTATCACATAAGAGAGATTTTGGATGCCTTAAAAC
TTAGTTAGGATAGTCAAGAAAATATCTATTCTATTTGGTCGAGTTGTAGC
AAGTTCTGAGGCTCATTTTCGTAACTATAGATTCATTCACGGAGCGCCCT
ATCAGTACTTTGAACTAACTTCCCAATTCTCCTCAAATGACATAGGTTGA
CCAGCGTGAAGATTTGTTTACTTGCCAAGTGAACCACTACATTTGCCTAT
GTGGTTAATGACCAATATACTGAGGGGGGGGGGGTTTCAAGGGGTACCCG
ATTCCGCAATTCCGCCAATTTTTTCCCCAATTTCCGACAAACTGTCTAAA
AATGAACCGAAATTCCGCCACCGAAAATTCCTTTGAAATTCAAGATTTTT
GTCAAAAATTCCGCGAATTTTAAATATTCTTTGCCAATTCCAAAATTCCG
CAAAACTTTTTGCAAAATTCCATTTTTCCGCACTAAACTTGTCTAATTTT
CCGTCTCCGGAGAACCCAATTTCCGTAATTCCGTCTAAATTTTCGCCAAA
TTCCGCCACTCCCTCCGAAAGAAAGGGTCGATTCTGCTCCTCCGCCAACC
ATAAACCCCGTCCCTATACTATAGAGCCATTTTCATTTACATTTATCTTT
CTCTTACCAGCTAAACCAGTTATTCAAAACCAAAAGACTTTGGTCTTTGC
ACCGCAGGGGATCAACTTTAGATTCCCTCCTTGTGAAGTTCGTTCAAATC
CACCAGCCAAAATCACATGGAAACGTATATTTTGGTCGATGCCTGCAGGA
CGTTTTGAAGTTCAAGCGAACACTTTGACGATTGGAAATCTTCAATTTTC
TGATGAAGGGTTTTATGTTTGTGAGGCTGAGAATTTCTTAGGTAGGTCAA
TTATCCCAGCTGGCACACAACGTTGTTTCAACGTTTATCTAACGTTCAAT
GTTGTGTGCCAGCTGGGATGGTATAATTTCTCTTAATCTTCCAAACCCGA
GTGTCGTTTATTTAAGTTCAAAATGAGTCCCCATACTTAAGGCTATAGCT
CTTGACCACTTGATTTTAAAGGGCATAGGCTATTCTGAAAGAATATGAAA
ATATCTTTCTAATGGTATTAAAACCAATGTCTAATTCTCAAGCTACAAGC
TTTTATGCTAATTATAATTTCTTGAATTAAAAAAAAAGCTAAAGTTTTCA
AATTATTTCGCACTGGAAAGATTAAGATGGTTTGCCAATTACATAACACT
AAATCGAGCAAGATTCTCAACATAATAGTATAACTGGACTCTGTACAAGG
CTGTAAAGATCTTCTTGAAAAAGAAGTTGGTGTCTATATCGAATTAAAAC
ATTATAAGGCCGTTTGGGTGTATTCTGTTTTCTGTTAAAGAGACCACACT
ATATTTTATCATGTTGAATCAAGACACACATTCAGGGTCGTTATAAGGGA
CGTCATCATGGCGTTCTAAATTCGCCTTTGGCGTCATCTATTTTCTTCTA
GGCAAAGATAAAAGCACGTTACAACTCAAAGTAAAAGCTTTTGAAATGCA
AAAAACATCTGTCTCAAGCATCAACATATATCCTAGTGAGATTGCCAACA
TCAGTTGTTCTGCTCTTGGAAATGCTGTCAAAATGGACGGGAAAATCACA
AAGGCAGGAGCTGCAGTGGACTATAAGGTAGATCGTTCGGCAGACAATAA
CACGATTACTGTGATTGCAAGTGTCAAAGAGAAGGGGGCCTACGTATGCT
CGATTTCCAATGCAGAAGAAACACTTGAAGTCGCTGTCTTAGTTCACTAT
GTCGGTAAGTTTGATTGATATCTAAAATATTGTAAGACTCAAAGTTCTTG
AATATTGTGATTGAGTTTCTATAAAATTCTCACAAATCAGACTGCGAAAA
GAAATTGAATATTAGTGAATCTAGGAAAACCAGACATACCAATGCTTAAA
ATGATGTCCAACGCCAGAAGTTTTTGAGATCTCAAAAATAGTCTGTACCT
CTGGAAAATAAAAAATCCAGGGTGGTCCGGTTTTTTGAGTGTAAAAATCC
AGGGTGGTCCAGTTTTTCAGAGGGAAACAATCCATAGGGTGGTTATCCTG
TGTTGAGGAGGTAAAACCCAGGGTAGTTCAAAAAATTAGAAAAAAATCCA
GGAAACTGTGTTAATTGATATAAAAATTATCTGTTATAGAGTTGGGTGCA
TGGAGCAGCTGGTCATGTAATTGTGAAAGTCGAAAAAAAACAAGAAATAG
AATCTGCAAGAATGAATCTCCAATGAAAAAATGTCGTGCTCAGAAAAAGG
AAACAACCAGTTGCATTTGCANCAAAATGAATCTCCAATGAAAAAGTGTC
GTGCTCGGAAAAAGGAAACAACCAGTTGCATTTGCAGTAAGCGAGCTGTA
GTAGTTGACACTCAACCTGAGACGACTTAGAATTTTTTTAAATATAGGAT
ACATAGACCCAGTATCTACGGCTAATTTCAAAATTCATTGCCGTACTACG
AAGCGATAAACGTGAGAGAGTATATAGCCTTAGGTTGAAACACATTTTTT
TATAAGCAACTCTAATTTTCGGCTGATGGCTGGGGTTGCTTAGCATTCTA
GCTTATTTTCTGGGCTTAGATCATCCTAAAAGCTTTTACTTTATGAGATA
GTGAAATAAGTTTGGCTAAATTCAGTATCGAGCCTTAGCAATCTGGTTGC
TTATAAACGATATGTACACTGGCATCAACGAGATAAAAATTGAAATGACG
TGGTGTGACAGCTCAAACTGCTCTTTCAGAAGACGCATACAGGAGGGCAC
TTATTTATAGGTTGACTAACCCTCTCCTCTTCTGAATTCGATACATTTGA
TGTCTTTGATTTATTTCGATATTATATCTATACTTCAAATTTAACTAGTA
AGTGCTTCACAGTAGCGTAGACAGGATAACCCTGAAATTTCCGATTCCGG
GGATAAATTTGCTTTGTGCTTATCTACACTACTGCATGAGTATATTAGGT
TACTACTGTGTCGAAAATGATTTACGATTTCATTTCATGCTTTCTTTTTC
GTTAAAACAGCATGCAAAAATGGTTGGAAAAAGAAATCAAACCCGTTGTT
ATGCTGACATCACTGTTAGAAATACATGGAACAACGCAGAGCTATTTTGC
CAAAGCAGAGGTGGACATCTTGCAAGCATATCAAATAGTGCAGAGAAGGA
TAACGTCTACAATACTTATGGTGGTAAGCCAAATGTCTGGATAGGTATGT
ATTTCATCAACCATATTGTAATCAGAGGGTAGGACTATTGTAGAAACCGC
CCTAGAGGCGTGTCCATGTACCGTGGGTTCCATACGTTGGAAATAGAATT
TACGCAGCAATTCGCTCAGATATTTTCTTATAGCATAGCAGATATGTTCC
ATCTGTAAGGAACCATAACTTCTACAAATTAGATAAAATTACGGAAAGTG
TTTTATACCACACTGGTCAGCTTAAGGGCTCTGACCATAGCCAAAAAATT
TGCTGAGGGATTTGAAATAAAACATTTGTTTTGGATTCCTTGACACTTAT
AGCAAAAAATTGTCTTTACAAGTTGTTTGGAAATTTATTCTATCAAGAGT
TATTAAGAATTTAATTACAAAAATGATGTTATGAACTTTAAAAAGATGTT
AATAGAATGTTATATTACCCTCTTTTGCAAAAATTGCTAAGTTTTAATGG
GTAATTAACGTTTTTCTTTTAAATTGTCTGCAAAGAATTGAACTATTTGA
ATTTTTTCGGAAATACTTTCTAAATTGATGTATCAAAAATTATAACACTG
TTTTTCTACAAAAGATTGGGATGAAAAATTGGTCAAAAACCGGTATTTTC
AAGAATTTGAGATAAAGAAGCTTTTGCAAAAATTTTCCAAAAAAAAATTA
AAATGTTTTTTCTTCGCCGAAAATAAGGTCTTCAAAGTTGAAATACGCTC
TATTGCAAAAATCTTCATTTTCTTCTTTATCGAATTTTTTCATTGGGATT
TTTAAATTTAAATAAATTTAATTTAGATTCAGGAATAGTTAGCCTAACAG
AAAATGTATAACATGCCATAGTTTTCTTGTCTACATCAGGCAGAAATTTA
TACTTTGTACATGGCAAATATGAGAAATTAACTATGGTCAGAGCCCTTAA
AGGGCCAATTTTTAGTTCGAATTACAGAAAAATTCGTGGTTCGAATTACA
GAGGGTAGACTTAATCATCGACTTGATTATTTTTCAAAATTTTACATTTA
AGGTTTATCTTTTGAAACCGAATGGCAATGGAGTGATGGAAGCCCTGTTG
TTTATTATAATAATCTTCAAAAGTCGAGATCTGGTAATGGTAGAAAGGAA
TGTGTTTCATTCGATGCTGGTGGAAGCTTGTGGGCTCTCCAAAATTGTGA
TCAAAGATTTATCTTTGTTTGTGAAGCATCAATGCAAGACAATCTTCCTA
TATAGCGCTTGTATGTCATTTTCATTTGACCTTCTTTGTGTTTTCTACAG
TATTAAGCTATAATGTTTTTGTTTTCGCAAGATGATTTTTAATTACACAG
TTTTTTGTTATTAAAATGTCTTAATTTTAGCTGAACCTGGATGTGCTTAT
CTTTTGACAACTTTTGAGCCTAAAAATCTTTTATTGACGTACTTGAAAAA
ATTTATTTACTATACATTTTTACCTTGGGTTGTAAGATTTGACCCTCAAG
TCAAACAAATCTGCTGCTCAAATTTATAGTTTGAGAGTAAGCTTGACGCA
ACGTTTAGAATACAATACGAAATAGACCTTATCGAAGTTTTCGATTTTTC
TAAAAAAGTGATGCATTGTGGGATTGTTTCGAGTGTATTACAATAGAATT
CCCTTGAGGAATTCCTAAGAGATTTCTATTGTAATACACTCGAAACAATC
CCACAATGCATCGTTTTTTTAGAAAAATCAAAAACTCCGATAAGGTCTAT
TGAGTCCACTTGAATTACAAAATAAATATTTCAATAACTCTAAAGGCCTC
CTACTCCTACTTGGTAACAACGTAAGGAGCTAGAATTCTAATACACGTTT
TTTTATAAGAACAAACTATATAAGAACATAAGGGGGGTTTTCAGGGGTCT
TAAATACTGTCATACCGACAAAAATTTGGGTCAAATACCGTAATACCGTC
GATAAAAGAAGTCTAATTACCTAAATACCGATACCGGTAGAAAATGAAAT
ACCGTAATCCCGTCGTTTTTTTGGTAATACCGATTACAGTGGGGAAAAAA
GGCCCAATACCGTCGTACCGTAAAAGTGAAAAGCCCCCCATAAGGCTTCG
ATGGTCAAAATGTTAAGAACAAGTTAAGAACATTTTAAGACTTTGTCGGC
TCTAAAATACCTGTTTTCTTAGAAAAATGCACAAAAATACCCACAGAATG
GTGAAAATAAGAACATGTTAGGAATATTTATAGGTTTAAAACTTAAAAAG
TTGAGAACATCCGAAGGCTTCAAAAATTTTGGATGTTCTTATGAAAAGAA
ACGTGTACCTTACTCTTAGGTGCCAAATAAACGCCCCCCCCCCCCCCCCC
CANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCCG
TTTATTTGGCACCTAAGAATAAGTATATTGATTTTGTCGTGTAGTTAATT
TGGTGGTTTGCAGAATTTATATTATTTTGTAGGGATTCAAATTGATAGAT
GGGGAAATTCCAGGCACTTAGGAATAAAAAATAATGTTTTAACTTAAAAA
ATGCTGATTCCACCATATAGAATTTATATCCTAAAAAGATTTTTTAAATT
TCTTCAATCAAAGTTCCCCTAAAAATAGTCCAAATTCATTACTAAGTTAC
AACAAAACTTTATGGTTTTTGAACTGAAGTTCATTTAATTTTGAATCAAT
TATTAACGAAACATACAATGCATCATTGAGAACTTGATTCGTTTGATATG
TTTTTTTTTCGTTCTTTACTTAGATAAGAAAAAGAGTATATGACAGAGTA
AGTCTGTCAAAAAGGAAAATCAGATGTTTTAAATCAGTATTTTGACAACA
GACCAATACTTTATGAGTATATTGTTTGCATGTTTGAAAACTATGTTATT
GTATTCTGAATTTTCGCTTGAAAAAAAAAACTCTGTATGTTTTAGGGGAA
GAATTTTCGCATTTGACGAGGATAAAGCTTTTTAAAATATTTCACGGCTT
TTCAAATTATTTCGAGAGAAAAAATTTTGCGGTTTTTTCTTAAATTTTTA
TTCAAGAATTTCACAATCTTTTGCAAAACAGGCGAGAACTTGACTTATCT
CACACCGTAAAGATAAAGTCAAACGAAAGAATAAAGTCGCCCAGTTTTTT
TTAATTGGTCTCGGTATATTAGCTTTCGCAAATTAGCCAAGTTTCTAACC
TGATGTGTAACCTAATTGTTTTTTCACTGATTTTCGCGAAAAACTGTAAA
AACTGGTTATTACGTCATAATCGATGACGTCATAAAAACTAAACATTGAA
TTTCTCAAGAATGGTTTATCCGATTGTCTTCAAACTTTCACCAAAGAAAA
GTCGATCGTTTAAAAAAAGAATTTTTTCAAAATTTTCATGACGTCAGCAG
AAATTAGGAAAAAAAGAAAAATCCTATTTTTTACTGACGTACACGTTTTT
TTTTTATAAGAACGTCAAAAATTTTCGAAGCCTTCGGATGTTCTTAGTTT
TTTGGATTTGAAGCCTAAAAATGTTCTTAAAATGTTCTTATTTTCAGCAT
TTTTTGAGCATTTTGTTGTAATTTCTTAAGAAAATGCATGTTTTTAAGTC
CCCAAAGCCTTCGAATGTTCTTAGAATGTTCTTAATTTTTTGGGCCTCGA
AGCCTTATGTTCTTATATAGTTTGTTCTTATAAAAAAAAACGTGTAATCA
GAATTTCGAGAAATAATTAGTGCCCACCACGGGATGAAACCCTCCCATTT
ATCCTCATCCTTCATTGAGGGGTCCTTCATTATGCAAGCATGATTATTTA
CAGCTATGAACCCTGACCACCATGCTGTTCTCACTTTATACTCATCCATC
TGGAATAATTTATTAATAAAACTCCCAACAAAATTCAACTTCCAGGTAAT
AAGTATCGTTTGTGGCTGCGTTTAGACCAGCCTGGCATTTGTAATTGCTT
GCAGTATTCTTTTGAATTCTATTGTTCCGCGCAATTGTTCGGTTTGTCAA
ATGCCTAATGATGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNTGCCTAATGATGCCAGCGTGTTGGCA
TTTCGTTGGCATTTGAAATGCCATTTTGAGCAAAGGAATCCCCTTTTCTG
GCATTTCAAATCAAACAAAGGAACCAAAAGAAAGAGAAAAAATGACATTT
TTGATTATTTAAAGTATTTGCACGTTTTTTATTCAGTTCTTTCTATAGAT
TGTAAAATTTGCAAGATTTGCCATAGCCTAGCCCTACGGCAAAAAGTTTN
TTTCATTGTTTGATCTGTCAAAGTTGAACTTGAGGGAATCACCTTTTCAG
TAATGACTCTAAAAAGACGATTCCTTAAATGCCATGANNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNGACGATTCCTTAAATGCCATGACAGAAAATACAATGGAAAA
GCTATTAAAATCGAATCCCTCATGAGCAAATGCCAAATTACAAATGCCAG
TTGGTCTAAACTGTTTTGGGATAAATAACGTTATCAAAAACTTGAGCAAA
TCGATTTTTTATCTTTTGAAAAAAAAAAGTTAAAACAATAAGCTTTCAGA
CCAGAGTTTTTTATAAGGACTATGATGATAAGTGATCATTTTACTATAAA
TTTACTTGTTAGATTGTTTCACTCTTGATTGTTTTATGTTTTGTCTGTTG
GTTTCTGGCTAAAAAATCAGCACACGCGCGCGAGTTAAGGCGATTTTTGG
TTTAAAATTAAATAATTGAGAAGTACAATACGATTTATATGCCGTTTATA
AGTATCACATTGTGTGAACACCACAATGTAATAGCAAATCTTGCGGTTGA
ATTTGAGTTAAGGGCTCTGACCTTATAAAAAAAAACGTGTAGGTTCTTTA
ACACTTTTAACAAAGAATTGCCTTTATAAATTTCTTTTTAATCAAATCCC
TTAAGAGTAATTAAGAATTTAATTGCAAAAATGACGTTACGAACTTTAAA
AAGACGTTAATAATATGTTGCTAATATGTTGTTCTTTTATAAAAAGTGCT
AAGTTTTAATGGGTAATTAACCTTTTTGTTTCGAAGTTTTTTTAAACTGT
CCCCAAAGAATTGAGCTGTTTTAGATTTTTCGGAAATTTTTTTTTCTTCT
TCATCAAAATTTTTTATTGTGATTCTTAAATTTTCAGAATCACGGATAAT
TGGCCTAACAGAATATGTATAACATGCCACAGTTTGTGGGCTACATCAAG
TAGAAATTTATATTTTGTACATGGCAAATATTAAAAATTCACTTTGGTCA
GAGCCCTTAAAATTACATCTCCTTAAAAATATGAATTTTTGAGGGAAAAC
ATCCTGAATTATTAATCCATATTTTCCATGTGACCACTAAAATGTCACAA
AGATATGACATGAAAATCAATGAGCTCCCAAAAGTGTCGTGAAGAGTTGT
TTATCATTCCATGTTTCAAAAATTTCATGACATTTCAAAATTATTTTTTA
CTACGCGATAGTGACTCTTGAAAGTGTTTTTGGTTGGCAAGATTTTCTTA
TTCAAAAATAAAATACAGTAGTGTTTCGCTTATTCGAAGTTCCATCATTC
GAATCTTTCTATAATTCGAACTCATTCCCTGTCCTAGTCAAGGAGAAACC
CTCTTGATATACTTTCTATAATTCAAATCTCTCTGTAATTCGAAGAAATC
AGATTTCCCGTTTGATTTCGAATTATCGAGATTCAACTGTGGAAGAAAAT
GTATAAGTGGGCCAGCTTACTAACCGTTCTATTGGATCTTCAATCGTTGG
CTTTTGCTGCTCACTACCTGAGCATCCTCGAACAAAATGGCGTCGTCCTT
CCCTCAGAAGACTCGCAAAGCATTGACGCTAGATCACAAATCGAATGCAT
TTTGAAATGTCGCACAAAATTCAATAAGAAGAATGGGTTCTACACTGAGG
ATAATTTATGCTTTTGTTCAAATGGGAATTTTGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_030309XLOC_030309Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00047587-exon-scaffold_132-1575043694:151735..151941TCONS_00047587-exon-scaffold_132-1575043694:151735..151941Clytia hemisphaericaexon
TCONS_00047587-exon-scaffold_132-1575043694:150790..150881TCONS_00047587-exon-scaffold_132-1575043694:150790..150881Clytia hemisphaericaexon
TCONS_00047587-exon-scaffold_132-1575043694:149715..150045TCONS_00047587-exon-scaffold_132-1575043694:149715..150045Clytia hemisphaericaexon
TCONS_00047587-exon-scaffold_132-1575043694:148651..148881TCONS_00047587-exon-scaffold_132-1575043694:148651..148881Clytia hemisphaericaexon
TCONS_00047587-exon-scaffold_132-1575043694:147738..148040TCONS_00047587-exon-scaffold_132-1575043694:147738..148040Clytia hemisphaericaexon
TCONS_00047587-exon-scaffold_132-1575043694:147156..147352TCONS_00047587-exon-scaffold_132-1575043694:147156..147352Clytia hemisphaericaexon
TCONS_00047587-exon-scaffold_132-1575043694:146298..146481TCONS_00047587-exon-scaffold_132-1575043694:146298..146481Clytia hemisphaericaexon
TCONS_00047587-exon-scaffold_132-1575043694:145082..145289TCONS_00047587-exon-scaffold_132-1575043694:145082..145289Clytia hemisphaericaexon
TCONS_00047587-exon-scaffold_132-1575043694:139807..139934TCONS_00047587-exon-scaffold_132-1575043694:139807..139934Clytia hemisphaericaexon
TCONS_00047587-exon-scaffold_132-1510915933:151735..151941TCONS_00047587-exon-scaffold_132-1510915933:151735..151941Clytia hemisphaericaexon
TCONS_00047587-exon-scaffold_132-1510915933:150790..150881TCONS_00047587-exon-scaffold_132-1510915933:150790..150881Clytia hemisphaericaexon
TCONS_00047587-exon-scaffold_132-1510915933:149715..150045TCONS_00047587-exon-scaffold_132-1510915933:149715..150045Clytia hemisphaericaexon
TCONS_00047587-exon-scaffold_132-1510915933:148651..148881TCONS_00047587-exon-scaffold_132-1510915933:148651..148881Clytia hemisphaericaexon
TCONS_00047587-exon-scaffold_132-1510915933:147738..148040TCONS_00047587-exon-scaffold_132-1510915933:147738..148040Clytia hemisphaericaexon
TCONS_00047587-exon-scaffold_132-1510915933:147156..147352TCONS_00047587-exon-scaffold_132-1510915933:147156..147352Clytia hemisphaericaexon
TCONS_00047587-exon-scaffold_132-1510915933:146298..146481TCONS_00047587-exon-scaffold_132-1510915933:146298..146481Clytia hemisphaericaexon
TCONS_00047587-exon-scaffold_132-1510915933:145082..145289TCONS_00047587-exon-scaffold_132-1510915933:145082..145289Clytia hemisphaericaexon
TCONS_00047587-exon-scaffold_132-1510915933:139807..139934TCONS_00047587-exon-scaffold_132-1510915933:139807..139934Clytia hemisphaericaexon
TCONS_00047587-exon-scaffold_132-1491911889:151735..151941TCONS_00047587-exon-scaffold_132-1491911889:151735..151941Clytia hemisphaericaexon
TCONS_00047587-exon-scaffold_132-1491911889:150790..150881TCONS_00047587-exon-scaffold_132-1491911889:150790..150881Clytia hemisphaericaexon
TCONS_00047587-exon-scaffold_132-1491911889:149715..150045TCONS_00047587-exon-scaffold_132-1491911889:149715..150045Clytia hemisphaericaexon
TCONS_00047587-exon-scaffold_132-1491911889:148651..148881TCONS_00047587-exon-scaffold_132-1491911889:148651..148881Clytia hemisphaericaexon
TCONS_00047587-exon-scaffold_132-1491911889:147738..148040TCONS_00047587-exon-scaffold_132-1491911889:147738..148040Clytia hemisphaericaexon
TCONS_00047587-exon-scaffold_132-1491911889:147156..147352TCONS_00047587-exon-scaffold_132-1491911889:147156..147352Clytia hemisphaericaexon
TCONS_00047587-exon-scaffold_132-1491911889:146298..146481TCONS_00047587-exon-scaffold_132-1491911889:146298..146481Clytia hemisphaericaexon
TCONS_00047587-exon-scaffold_132-1491911889:145082..145289TCONS_00047587-exon-scaffold_132-1491911889:145082..145289Clytia hemisphaericaexon
TCONS_00047587-exon-scaffold_132-1491911889:139807..139934TCONS_00047587-exon-scaffold_132-1491911889:139807..139934Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_132supercontigscaffold_132:139807..151941 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0.188762	0	0	0.580727	0.331969	0.50082	0.294139	0.427782	0	0.13208	1.83233	3.96838	10.7946	7.48618	1.07141	1.80777	0	0.907772	0	0	1.05649	0.640756	1.12468	3.63989	0	0.000223996	4.44726	8.56657
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00047587 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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