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Overview
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00047622 ID=TCONS_00047622|Name=TCONS_00047622|organism=Clytia hemisphaerica|type=transcript|length=3018bpRun BLAST on NCBI protein sequence of TCONS_00047622-protein >TCONS_00047622-protein ID=TCONS_00047622-protein|Name=TCONS_00047622-protein|organism=Clytia hemisphaerica|type=polypeptide|length=436bp MCAVKSMQKYRILGKKGEGTFSEVLKCQSIEDGQYYACKRMKQQFESIDRRun BLAST on NCBI transcript from alignment at scaffold_133:95973..112168+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>TCONS_00047622 ID=TCONS_00047622|Name=TCONS_00047622|organism=Clytia hemisphaerica|type=transcript|length=16196bp|location=Sequence derived from alignment at scaffold_133:95973..112168+ (Clytia hemisphaerica) Coding sequence (CDS) from alignment at scaffold_133:95973..112168+ >TCONS_00047622 ID=TCONS_00047622|Name=TCONS_00047622|organism=Clytia hemisphaerica|type=CDS|length=17043bp|location=Sequence derived from alignment at scaffold_133:95973..112168+ (Clytia hemisphaerica) Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Position
The following features are aligned
Expression
Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Values :
GrOo_1 GrOo_2 FGOo_1 FGOo_2 EG_1 EG_2 P1_1 P1_2 P2_1 P2_2 P3_1 P3_2 PoPr_1 PoPr_2 St_1 St_2 GO_1 GO_2 PH_1 PH_2 BMF_1 BMF_2 MMF_1 MMF_2 M_1 M_2 GEC_1 GEC_2 GEN_1 GEN_2
Annotated Terms
The following terms have been associated with this transcript:
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Blast
BLAST of TCONS_00047622 vs. Swiss-Prot (Human)
Match: MOK (MAPK/MAK/MRK overlapping kinase OS=Homo sapiens GN=MOK PE=2 SV=1) HSP 1 Score: 431.795 bits (1109), Expect = 1.132e-140 Identity = 197/294 (67.01%), Postives = 247/294 (84.01%), Query Frame = 3
Query: 258 MQKYRILGKKGEGTFSEVLKCQSIEDGQYYACKRMKQQFESIDRVNNLREIQCMRRLSPHLNIVDLKEVIFDKKSGTLALIIELLDMNLYEVIKGRRNYLTESKCRQYIYQTLKALDHMHRNGIFHRDIKPENILLKNDVVKLADFGSCRSVYSKQPYTEYISTRWYRAPECLLTDGWYTYKMDLWSIGCVFAEIASLKPLFPGSNELDQITKIHHVIGTPTPELLNKFKKSKHMDFNFPPCRGSGLSKVLSHLTKDTLSMVESLCIYDPDERPSAKQVLRHQYFKQLRDMDKR 1139
M+ Y+ +GK GEGTFSEV+K QS+ DG YYACK+MKQ+FESI++VNNLREIQ +RRL+PH NI+ L EV+FD+KSG+LALI EL+DMN+YE+I+GRR L+E K Y+YQ K+LDH+HRNGIFHRD+KPENIL+K DV+KL DFGSCRSVYSKQPYTEYISTRWYRAPECLLTDG+YTYKMDLWS GCVF EIASL+PLFPG NELDQI+KIH VIGTP ++L KFK+S+ M+F+FP +GSG+ + ++L+ LS++ ++ YDPDER +A Q L+H YF++ R +KR
Sbjct: 1 MKNYKAIGKIGEGTFSEVMKMQSLRDGNYYACKQMKQRFESIEQVNNLREIQALRRLNPHPNILMLHEVVFDRKSGSLALICELMDMNIYELIRGRRYPLSEKKIMHYMYQLCKSLDHIHRNGIFHRDVKPENILIKQDVLKLGDFGSCRSVYSKQPYTEYISTRWYRAPECLLTDGFYTYKMDLWSAGCVFYEIASLQPLFPGVNELDQISKIHDVIGTPAQKILTKFKQSRAMNFDFPFKKGSGIPLLTTNLSPQCLSLLHAMVAYDPDERIAAHQALQHPYFQEQRKTEKR 294 The following BLAST results are available for this feature:
BLAST of TCONS_00047622 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens)) Total hits: 1
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