TCONS_00047642 (transcript) - C. hemisphaerica

Overview
NameTCONS_00047642
Unique NameTCONS_00047642
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2309

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00047642 ID=TCONS_00047642|Name=TCONS_00047642|organism=Clytia hemisphaerica|type=transcript|length=2309bp
TAAAAAGATAAAGAGATTTAAAAATACCAAAGAAAAACAATTGTGCTTTA
TCAAACATGGTTGTAGAAGTTGATCAAAAGAATGTCAAAGCTGCATTAAA
AGATGATGTCAAGGAGGCTGACAAGATCACANGTTGATCAAAAGAATGTC
AAAGCTGCATTAAAAGATGATGTCAAGGAGGTTGCCAAAATTACCAAGCC
GGATCCAAAAGATCTTTTACCCGTTTCATTGCTCTGTGGCTTTCTGGGAG
CGGGTAAAACAACCCTTCTTAAGCACATCTTGGAAACCAAACACAATGAA
GAGGGCTTTAGATGTGCTGTTATCGTCAATGATATGGCAACTCTGAATAT
CGACAAAAGTTTGATCGATCAGTCAGCCCTTGTTCAAAGTGACGAAGTCA
TTGCAATGCAAAATGGTTGTTTTTGCTGCACTCTTCAAAATGACCTTGTG
GATCAAATTGTCTCTTTGGCACAAAAGAATATATTTGATTACATGTTGAT
CGAGGCATCAGGAGTTTCGGAACCAGCCCAAATCGCTCCACTTTTTGATC
TTTGTGAAGATGAGCATGACCATGAAGAGGAACATCCAGAAGGACCAGAG
CTGGGTGAAGTTGCAAGGCTTGATACATGTGTTACTGTTATTGATGCAGC
TGAATTTTACAATAATCTTGAAAGCATGAAAATGTACGAGGAAGGGGACA
TGGTTGGAACGATTTCAGAACTTTTGATGGAACAAGTGGAGTATTCCAAC
GTTGTCATCCTCAATAAACAAGATCTCATAAATGATAAGCAAAGAGCTGA
TATTCTAGACcgaattaaaattttaaatccaaGAGCGAAGGTGCTTTCTT
CACTTCAAAGTAAAGTAGATGTCAAGGAGATATTAAATACAAATTTGTAC
AACAAAGTGGAGATGGATGAAGACTCAGTGATGTGCTCTGCAACCAGaat
taaaGCAGAATCGAATGAGGTTGAACCAGAATGTTGCGTTAAATCTGTTG
AATCGGGTAAAAAGAAATGTTGTAAAAGTAAAAAGGCTGAGAACAAGCAA
ATTATTGATTCCGGAAAATCACAACTATTTCTTGGAGTGGTGGACAAAAT
TGCTGGTCAGAAACAACTAACCAGGCACGAAGAACGCTTTGGGATCACTT
CCTTTGTTTATCGGTCAAGAAGGCCATTTCATTCAGGACGACTTTGTGGA
TTATTTTTCGAACCGTTCTTCATCATGAGatacgaagaagaagaaaatga
gttGGATGAGTTGCAAAAGAAAGCAGCAAATAAACAAAAACGTAGAGTTA
AAAAAATTGGTGAACTATTACGTGCCAAAGGCTTCATGTGGCTTGCAACT
TCCCATGAAATCTTGGGTGGTTTTCAACAAGCTGGAAATGTTGTGAGGGT
AGAAGCAGAAGGGAATTGGATGGTTGATTGTCGTGACCAGTGGGAAGggg
aagaaggagaagaaagaGTTCTGAAAGATATGACGAACGAGAAAGGTGAA
GAATACGAATACGGTGATCGCCGTCAAGAATTAGTTTTCATCGGAATGAC
TTTGAAATATCAAACCATACAAAAAATATTAGATGAATGTCTTTTGACTG
ACGATGAAATGAAGCTAGGACCGGAGAAATGGTTGGAACAGTTTGGCGAA
GATGCTCCGTTGAGATTGTTCTTAGTAGAGGATGAAGAAGAGGACAGTGA
AGAGGACGAAGAAGAAGATGGAGAGGGAACTGATGATGAGGAGACTGAAA
ACGAAGATGAAGAGAAAAGTGAAATGGACGAGAAGAGCTCAGAAAAGACG
ACGGCTCCCGGTAAAAAGCGAAAGGTCAAGAAAGATGCGGAGAAtaatga
tgatgaagaaaagaaaaaagaaatcccAGCCAAGAGAAAGAAGAGCAAAA
AAGACCTCGATAATGAATAAAGAAGAAACTAAACCTGACAAAGAAATCCC
AGTCAAGAGAAATAAGAGCAAGAAACATTGATTTCTGGGGACCACTTGGA
TAAAGCTTTGATAAACATGCTTTGGGATTTGTAAAGATAATTTTCACACA
TTTTGTACATAGTTTGGATAACACCATTTTTTTTATCGTGTCAGatttaa
ttcttttttgatatttctttctACCAATGTCTCATTAGAATAAAATCCTC
TCTTGCTATTTACCTCGTCGGATACTAAATGTAatcaagaattaaaaaaa
aaaccaaagaTGCATTTGAAAAAGACTACAANatttaattcttttttgat
atttctttctACCAATGTCTCATTAGAATAAAATCCTCTCTTGCTATTTA
CCTCGTCGG
Run BLAST on NCBI

transcript from alignment at scaffold_133:307559..314425+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00047642 ID=TCONS_00047642|Name=TCONS_00047642|organism=Clytia hemisphaerica|type=transcript|length=6867bp|location=Sequence derived from alignment at scaffold_133:307559..314425+ (Clytia hemisphaerica)
TAAAAAGATAAAGAGATTTAAAAATACCAAAGAAAAACAATTGTGCTTTA
TCAAACATGGTTGTAGAAGTTGATCAAAAGAATGTCAAAGCTGCATTAAA
AGATGATGTCAAGGAGGCTGACAAGATCACANGTTGATCAAAAGAATGTC
AAAGCTGCATTAAAAGATGATGTCAAGGAGGTTGCCAAAATTACCAAGGT
TCGTTTATAAACTGCTTttgttttttactttattttttattatccaTCTA
CAATCCCCACcgtaatatttggcacaaaaggggaattcccccAAATTTGA
AAACCGCAAGTAattttttaagtgctttaaagtacggtttgaaagtagag
ttttaactctgaattttaacacgagacttaagagttaggaccttaggatc
tcaggatctaaaagttcaaaaatgttccaataaggctgagaatatagcct
ggaagccacttaatccctcccaaatcgaaaaatccaatgaaacaaagtgg
aagtactgaaactgcaattctcgctcgatctttaaattctgaaaacgtta
aaatacccaaaagtgtcaatatattttggcgCCGATTGTACTAGACAAAT
AGATAAACGCTAGCCCAATTCACCCAAAAGTTTTCCTTTCAAATAATTAT
CACAagataaaacaatgcaatgaaaGCACTGGAtaacatattatttaaaa
atgatttttagcaATAGGATCATGAGAGTCTTATCCAATTATATACCATA
TTTCTAATATAGAAGCAGCCGGATCCAAAAGATCTTTTACCCGTTTCATT
GCTCTGTGGCTTTCTGGGAGCGGGTAAAACAACCCTTCTTAAGCACATCT
TGGAAACCAAACACAATGAAGAGGGCTTTAGATGTGCTGTTATCGTCAAT
GATATGGCAACTCTGAATATCGACAAAAGTTTGATCGATCAGTCAGCCCT
TGTTCAAAGTGACGAAGTCATTGCAATGCAAAATGGTTGTTTTTGCTGCA
CTCTTCAAAATGACCTTGTGGATCAAATTGTCTCTTTGGCACAAAAGAAT
ATATTTGATTACATGTTGATCGAGGCATCAGGAGTTTCGGAACCAGCCCA
AATCGCTCCACTTTTTGATCTTTGTGAAGATGAGCATGACCATGAAGAGG
AACATCCAGAAGGACCAGAGCTGGGTGAAGTTGCAAGGCTTGATACATGT
GTTACTGTTATTGATGCAGCTGAATTTTACAATAATCTTGAAAGCATGAA
AATGTACGAGGAAGGGGACATGGTTGGTAGGTTTCACTGATTTATGCCAC
AGATATCTTATTAACGTATCTATACGAGTAGCATACTTGCAATGGCAGTC
AAGGTGGGGGGGGCGATGGTTGGTGTAATAATAAAGAGCTATGTTTTttg
caaacttaatttttgaatttggaaTTATGTGTCAAAATATTTGGCTATGT
AGATAGAATAATATACCATCTTTCAATTTTAGGAACGATTTCAGAACTTT
TGATGGAACAAGTGGAGTATTCCAACGTTGTCATCCTCAATAAACAAGAT
CTCATAAATGATAAGCAAAGAGCTGATATTCTAGACcgaattaaaatttt
aaatccaaGAGCGAAGGTGCTTTCTTCACTTCAAAGTAAAGTAGATGTCA
AGGAGATATTAAATACAAATTTGTACAACAAAGTGGAGATGGATGAAGAC
TCAGTGATGTGCTCTGCAACCAGGTAACATATCTCTTATCTTTTATATCT
TAGCATCAGGGAAGCATCTCTTATGAAGAAAGGAGGCAAGATCTTATCAT
TTTGAACGAGAATTTCTCAAACTCGTAACACTACCATCTTACAGTATTAA
TGTGTTGGGTAttgtaaaacttttttgaagaagaatattttacttttaga
aCTAAACCCAATTATTTTGAGAAGACGTATTGAAATTCCCAATCTTAGAA
CTGTCCCTAATTTCCCAATAGGATCTGATTTCACTAGAAAATTTTGCAGA
TCTTTCGAATGAGTATTGTGAAAACTTTTCCCTTTTGCTATTGAGACTCG
CTTTTATTTTGGAGAGGTCGTCAGGCTTTAGATTGGAGTTTTTTGGacat
tttacatatttttttagaattaaaGCAGAATCGAATGAGGTTGAACCAGA
ATGTTGCGTTAAATCTGTTGAATCGGGTAAAAAGAAATGTTGTAAAAGTA
AAAAGGCTGAGAACAAGCAAATTATTGATTCCGGAAAATCACAACTATTT
CTTGGAGTGGTGGACAAAATTGCTGGTCAGAAACAACTAACCAGGCACGA
AGAACGCTTTGGGATCACTTCCTTTGTTTATCGGTCAAGAAGGCCATTTC
ATTCAGGACGACTTTGTGGATTATTTTTCGAACCGTTCTTCATCATGAGa
tacgaagaagaagaaaatgagttGGATGAGTTGCAAAAGAAAGCAGCAAA
TAAACAAAAACGTAGAGTTAAAAAAATTGGTGAACTATTACGTGCCAAAG
GCTTCATGTGGCTTGCAACTTCCCATGAAATCTTGGGTGGTTTTCAACAA
GCTGGAAATGTTGTGAGGTAAGTTCATCAAttctcttaaatattttcata
aattattaaGAACAATGAATCTTTACTTTGAATCTTGGGGAGGGGCGCTC
GAGAGGGGCCTTTAAATCTCAAGATTGACTAGTGCTATGACCTTGAAACT
TTGACCAGTGGTAGATATAGATAATTGAAGAtggtttgcaaaattttggt
tcGGCCACCTTTCTAgttagtattttacagaccagaccaaacttgaccaa
aatcatgtattgactgattgacttGTTCGATTTGACGGAAATTTGTTCAT
AAAGGCTGATTTGTCAAATAATAGAGACTATTAACAGGAAAAGTTCGTTT
CCATGAGTATTAGGGAATTtgcagactggtctgtaaaatacatgcTGACC
ACTTGCGGGAACTCATGAACTGCAggagcttttgacttgaaattttcacc
agtgatagatattgaccatctaagacagtgtggtattttacagaccggtc
ggttttttacctaaaatgatCACTTTCGGCATAACCACTTGTCcgatttt
gctaaaattttgggTGCAAGCTTGTATCATCAATACCTAACACTTTNGAT
ATTGACCATCTAAGACAGtgtggtattttacagaccggtcggttttttac
ctaaaatgatCACTTTCGGCATAACCACTCACCCGATTTTGCTAAAGTTT
TGGGTGCAAGCTTGTATCATTAATACCTAAcacttgtcaaaatttcaatg
gCATTTTCCACTCACTAGATACAGTATCCTAGGGCTGTTTAGGCAAAAAA
GGGTAATTTTGGGCCACTCTGTAAAATACACCATACCAACAGGTggcaaa
aaaagtttaaagtgagAAAAAGCTAGAGGGGGtcctatttttgctatttt
caataaatgatgacgtcatcaggtggtggttacgaaattttcattaaaga
tGCTAATTCATATTCATATTTGTTGCCCACTTGCAAGATCTCAAGTcaat
tggataaatatttcaaaatttatcaataaatttcgTTAGGCCCCTCCCAA
TTAGAAAAGTTCAAGTTAGCAAATATAGAACGAACAAATACACCTATCAG
AGGAATTatcagaatttttttgtttctgataAATTTACAAGGAAATTCTT
TTCTATGAGTGTAACGACTTCAGACATTTTGACGTCTGTTCTTCCTGGTC
ATCTCCAACAACCCAGTACGCTCAAAAGCTAGGTAGGTGTTTTCGGttca
aacaaaagattttattctGTTTTTCATTCTATAATAGGGTAGAAGCAGAA
GGGAATTGGATGGTTGATTGTCGTGACCAGTGGGAAGgggaagaaggaga
agaaagaGTTCTGAAAGATATGACGAACGAGAAAGGTGAAGAATACGAAT
ACGGTGATCGCCGTCAAGAATTAGTTTTCATCGGAATGACTTTGAAATAT
CAAACCATACAAAAAATATTAGATGAATGTCTTTTGACTGACGATGAAAT
GAAGCTAGGACCGGAGAAATGGTTGGAACAGTTTGGCGAAGATGCTCCGT
TGAGATTGTTCTTAGTAGAGGATGAAGAAGgtgacatttttgtttttaat
ttataaaaaatcattCTTCTAGCTGTTTCTTTGGTGACTTTGTTGGCGGA
TCAACTGCTGTTTTTCCTTTTAATACCACTATCTTTGTAGTCAAAAGGAA
CCCCCTCCTTCAATTATTTTTGTCCTAAAGTAAAAAGTCTAAGGGAAACC
GATGTAGCGGATTATTTTAACTCCTTGTAAATGTCGGCCTCCCCAGTTAA
GAATAAACTAGAAAATAATGACTCCCCTAGAGTAgaaatttcctaggaaa
tatcGACTCCCTTAGTAAATATTGGCTCCCTATAAAGAGGCTGAGAGAGT
CGTGATGAAATAGTTTATAATGATCCCCGACCCCCAAGTAGACAAGAACT
GGAGTCATTGCAGTGCTGTTCGATTCGGTTTTTTACGGAACTGACTTTTG
TCGTTGGGACTCATTTTGGCGAAATTCCTTCATTCTCCAAGGGACTTAAA
AGAGTCTTCAGAATGTGTGGTATTTTTGCATAACAGAATTTCACGTAATT
TTCGGTTGACACGAAGTAAACTTTTATTCCTCAAGAATGTTTACCAAAAA
TCTATAGTTAgctacaaccaatcagctgttaggTCTATGGTGTGATgtcg
aagacattgcagtgggtGCATATAATGAATAGGAAtagtataaaattgtt
ctttcattttGTTCGTTTGCAGAGGACAGTGAAGAGGACGAAGAAGAAGA
TGGAGAGGGAACTGATGATGAGGAGACTGAAAACGAAGATGAAGAGAAAA
GGTAtactttttgtaaaatttgccaTTTGTCTTTTGCGGACCTACCTGGA
GTTCCTATCAACTCCTAGTTAGTGAGTGAGTGAGTTGCACAAagacgtgt
ttttatagaaaaatgggccaaattcaacatttttttataagcacacaatC
ACTACCAATTACTCagttattagcttttctcgagattggctcattcattC
TTTATGGTTTTTATGCACAAAcgtgcataactataaaccctcgaatgtga
cggagcatGTTTTTTATTCGGGATTTTATTTTATCTGGGATTTgtattcc
attgttttcaaatcagaaaattcagtggggatggaaaaaatagcacaata
ttttgcagtcaGATTTTGgttatttgataatttttttgtgagtACAAAAG
ttagaggataattttccacgagacgatattttggctcCAAGGCTTTTAGT
ATTCCCGTTTCGACCTGCgcatagtttttttttgtttttatttcgtcAAT
GAAAATTATGTCAAGGGACAGGCAGTTTTCTTGAGATTTGGTTTTTAGTA
GTCCCTATCTGGATTTTGCCGAATCGGtctattcagttttttttaaccTG
TTTTATCATTTAATATAGTGAAATGGACGAGAAGAGCTCAGAAAAGACGA
CGGCTCCCGGTAAAAAGCGAAAGGTCAAGAAAGATGCGGAGAAtaatgat
gatgaagaaaagaaaaaagaaatcccAGCCAAGAGAAAGAAGAGCAAAAA
AGACCTCGATAATGAATAAAGAAGAAACTAAACCTGACAAAGAAATCCCA
GTCAAGAGAAATAAGAGCAAGAAACATTGATTTCTGGGTAGGTTAACTAA
ACATTCACAACTTGTGTATCAATGAGTTATTGATTGAGAAGTGTGGAGCT
TGGCGCTTGGCACTATCAGTCATCGTCTATAGGCTGCATACAAGGGTGGA
TTAAGTTGTGTTCGATGAAATAGGGTTGAACGACACCAGGGGGGGTACaa
aggcagggtactaacccatagccgggtggtggtgtctatttttgcatttc
aaaaaagttagtacccgttACTACTTTAGGGGTGGGGGTGTGTATTTATC
ACTCTTCTAGCAAGTACAGGgtactatttgggtactttttcacagagTTT
TNtgtatttttcactcttctAGCAAGTACAGGgtactatttgggtacttt
ttcacagagttttgctcctttttcaataaaaaaagtagtcttttgtaata
ttttgatttttttcaaatatatttttttttaattgagaaacttttttttt
aattgagaaacttttttttactctttttgatttttgtgaagacAAAACTT
CCGAAATGGTCAAAAAGTGTGTTATTAAAATCAAAAGACAAAAGCCTCTG
ACTTAATCAATGATAGTTTGTTTGAATTATCTGTCCAtttcagtcagaaa
aactaACATAGTACCCCCCCCCTGACGACACAAGTTTCTAGTTAAAAAAG
GAATTGAAACtattttattcatgatattcattacgtaatATTTTCCATGG
AACCATCccagtttttgccagtagtggttTCTTGGCTcgaatttctttga
attttcttGAGCACTTTGTAATTCAATTTATTTCATTGTATTTCAGGGAC
CACTTGGATAAAGCTTTGATAAACATGCTTTGGGATTTGTAAAGATAATT
TTCACACATTTTGTACATAGTTTGGATAACACCATTTTTTTTATCGTGTC
AGatttaattcttttttgatatttctttctACCAATGTCTCATTAGAATA
AAATCCTCTCTTGCTATTTACCTCGTCGGATACTAAATGTAatcaagaat
taaaaaaaaaaccaaagaTGCATTTGAAAAAGACTACAANatttaattct
tttttgatatttctttctACCAATGTCTCATTAGAATAAAATCCTCTCTT
GCTATTTACCTCGTCGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_030343XLOC_030343Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00047642-exon-scaffold_133-1491911889:307559..307756TCONS_00047642-exon-scaffold_133-1491911889:307559..307756Clytia hemisphaericaexon
TCONS_00047642-exon-scaffold_133-1510915933:307559..307756TCONS_00047642-exon-scaffold_133-1510915933:307559..307756Clytia hemisphaericaexon
TCONS_00047642-exon-scaffold_133-1575043694:307559..307756TCONS_00047642-exon-scaffold_133-1575043694:307559..307756Clytia hemisphaericaexon
TCONS_00047642-exon-scaffold_133-1491911889:308327..308834TCONS_00047642-exon-scaffold_133-1491911889:308327..308834Clytia hemisphaericaexon
TCONS_00047642-exon-scaffold_133-1510915933:308327..308834TCONS_00047642-exon-scaffold_133-1510915933:308327..308834Clytia hemisphaericaexon
TCONS_00047642-exon-scaffold_133-1575043694:308327..308834TCONS_00047642-exon-scaffold_133-1575043694:308327..308834Clytia hemisphaericaexon
TCONS_00047642-exon-scaffold_133-1491911889:309041..309281TCONS_00047642-exon-scaffold_133-1491911889:309041..309281Clytia hemisphaericaexon
TCONS_00047642-exon-scaffold_133-1510915933:309041..309281TCONS_00047642-exon-scaffold_133-1510915933:309041..309281Clytia hemisphaericaexon
TCONS_00047642-exon-scaffold_133-1575043694:309041..309281TCONS_00047642-exon-scaffold_133-1575043694:309041..309281Clytia hemisphaericaexon
TCONS_00047642-exon-scaffold_133-1491911889:309676..310125TCONS_00047642-exon-scaffold_133-1491911889:309676..310125Clytia hemisphaericaexon
TCONS_00047642-exon-scaffold_133-1510915933:309676..310125TCONS_00047642-exon-scaffold_133-1510915933:309676..310125Clytia hemisphaericaexon
TCONS_00047642-exon-scaffold_133-1575043694:309676..310125TCONS_00047642-exon-scaffold_133-1575043694:309676..310125Clytia hemisphaericaexon
TCONS_00047642-exon-scaffold_133-1491911889:311396..311688TCONS_00047642-exon-scaffold_133-1491911889:311396..311688Clytia hemisphaericaexon
TCONS_00047642-exon-scaffold_133-1510915933:311396..311688TCONS_00047642-exon-scaffold_133-1510915933:311396..311688Clytia hemisphaericaexon
TCONS_00047642-exon-scaffold_133-1575043694:311396..311688TCONS_00047642-exon-scaffold_133-1575043694:311396..311688Clytia hemisphaericaexon
TCONS_00047642-exon-scaffold_133-1491911889:312381..312459TCONS_00047642-exon-scaffold_133-1491911889:312381..312459Clytia hemisphaericaexon
TCONS_00047642-exon-scaffold_133-1510915933:312381..312459TCONS_00047642-exon-scaffold_133-1510915933:312381..312459Clytia hemisphaericaexon
TCONS_00047642-exon-scaffold_133-1575043694:312381..312459TCONS_00047642-exon-scaffold_133-1575043694:312381..312459Clytia hemisphaericaexon
TCONS_00047642-exon-scaffold_133-1491911889:313077..313295TCONS_00047642-exon-scaffold_133-1491911889:313077..313295Clytia hemisphaericaexon
TCONS_00047642-exon-scaffold_133-1510915933:313077..313295TCONS_00047642-exon-scaffold_133-1510915933:313077..313295Clytia hemisphaericaexon
TCONS_00047642-exon-scaffold_133-1575043694:313077..313295TCONS_00047642-exon-scaffold_133-1575043694:313077..313295Clytia hemisphaericaexon
TCONS_00047642-exon-scaffold_133-1491911889:314105..314425TCONS_00047642-exon-scaffold_133-1491911889:314105..314425Clytia hemisphaericaexon
TCONS_00047642-exon-scaffold_133-1510915933:314105..314425TCONS_00047642-exon-scaffold_133-1510915933:314105..314425Clytia hemisphaericaexon
TCONS_00047642-exon-scaffold_133-1575043694:314105..314425TCONS_00047642-exon-scaffold_133-1575043694:314105..314425Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_133supercontigscaffold_133:307559..314425 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
20.6318	18.363	21.5833	21.6574	3.99469	6.95053	3.11464	3.06595	9.33095	5.78725	7.30148	8.8896	11.7803	13.6419	12.1343	13.6061	12.5716	10.691	1.79178	3.28607	9.73816	7.35823	9.86788	10.481	4.20411	1.01446	3.44274	9.41668	10.5775	6.39914
Blast
[Close]
BLAST of TCONS_00047642 vs. Swiss-Prot (Human)
Match: CBWD2 (COBW domain-containing protein 2 OS=Homo sapiens GN=CBWD2 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 1.354e-21
Identity = 67/233 (28.76%), Postives = 129/233 (55.36%), Query Frame = 1 
Query:  217 LPVSLLCGFLGAGKTTLLKHILETKHNEEGFRCAVIVNDMATLN-IDKSLIDQSALVQSDEVIAMQNGCFCCTLQNDLVDQIVSLAQ-KNIFDYMLIEASGVSEPAQIAPLFDLCXXXXXXXXXXXXXXXXXXVARLDTCVTVIDAAEFYNNLESMKMYEEGDMVGTISELLMEQVEYSNVVILNKQDLINDKQRADILDRIKILNPRAKVLSSLQSKVDVKEILNTNLYNKV 909
            +PV+++ G+LGAGKTTLL +IL  +H++   R AVI+N+    + ++KSL         +E + ++NGC CC+++++ +  I +L Q K  FDY+L+E +G+++P  +A +F                 ELG    LD  +T++D+         +K   E    G I+E    QV  ++ +++NK DL+ ++    +   I+ +N   ++L + +S+VD+  +L+ + ++ +
Sbjct:   42 IPVTIITGYLGAGKTTLLNYILTEQHSK---RVAVILNEFGEGSALEKSLAVSQGGELYEEWLELRNGCLCCSVKDNGLRAIENLMQKKGKFDYILLETTGLADPGAVASMF-------------WVDAELGSDIYLDGIITIVDSK------YGLKHLAEEKPDGLINE-ATRQVALADAILINKTDLVPEEDVKKLRATIRSINGLGQILETQRSRVDLSNVLDLHAFDSL 251
The following BLAST results are available for this feature:
BLAST of TCONS_00047642 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CBWD21.354e-2128.76COBW domain-containing protein 2 OS=Homo sapiens G... [more]
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