TCONS_00047645 (transcript) - C. hemisphaerica

Overview
NameTCONS_00047645
Unique NameTCONS_00047645
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2246

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00047645 ID=TCONS_00047645|Name=TCONS_00047645|organism=Clytia hemisphaerica|type=transcript|length=2246bp
AAAAGATAAAGAGATTTAAAAATACCAAAGAAAAACAATTGTGCTTTATC
AAACATGGTTGTAGAAGTTGATCAAAAGAATGTCAAAGCTGCATTAAAAG
ATGATGTCAAGGAGGTTGCCAAAATTACCAAGCAGCCGGATCCAAAAGAT
CTTTTACCCGTTTCATTGCTCTGTGGCTTTCTGGGAGCGGGTAAAACAAC
CCTTCTTAAGCACATCTTGGAAACCAAACACAATGAAGAGGGCTTTAGAT
GTGCTGTTATCGTCAATGATATGGCAACTCTGAATATCGACAAAAGTTTG
ATCGATCAGTCAGCCCTTGTTCAAAGTGACGAAGTCATTGCAATGCAAAA
TGGTTGTTTTTGCTGCACTCTTCAAAATGACCTTGTGGATCAAATTGTCT
CTTTGGCACAAAAGAATATATTTGATTACATGTTGATCGAGGCATCAGGA
GTTTCGGAACCAGCCCAAATCGCTCCACTTTTTGATCTTTGTGAAGATGA
GCATGACCATGAAGAGGAACATCCAGAAGGACCAGAGCTGGGTGAAGTTG
CAAGGCTTGATACATGTGTTACTGTTATTGATGCAGCTGAATTTTACAAT
AATCTTGAAAGCATGAAAATGTACGAGGAAGGGGACATGGTTGGAACGAT
TTCAGAACTTTTGATGGAACAAGTGGAGTATTCCAACGTTGTCATCCTCA
ATAAACAAGATCTCATAAATGATAAGCAAAGAGCTGATATTCTAGACcga
attaaaattttaaatccaaGAGCGAAGGTGCTTTCTTCACTTCAAAGTAA
AGTAGATGTCAAGGAGATATTAAATACAAATTTGTACAACAAAGTGGAGA
TGGATGAAGACTCAGTGATGTGCTCTGCAACCAGaattaaaGCAGAATCG
AATGAGGTTGAACCAGAATGTTGCGTTAAATCTGTTGAATCGGGTAAAAA
GAAATGTTGTAAAAGTAAAAAGGCTGAGAACAAGCAAATTATTGATTCCG
GAAAATCACAACTATTTCTTGGAGTGGTGGACAAAATTGCTGGTCAGAAA
CAACTAACCAGGCACGAAGAACGCTTTGGGATCACTTCCTTTGTTTATCG
GTCAAGAAGGCCATTTCATTCAGGACGACTTTGTGGATTATTTTTCGAAC
CGTTCTTCATCATGAGatacgaagaagaagaaaatgagttGGATGAGTTG
CAAAAGAAAGCAGCAAATAAACAAAAACGTAGAGTTAAAAAAATTGGTGA
ACTATTACGTGCCAAAGGCTTCATGTGGCTTGCAACTTCCCATGAAATCT
TGGGTGGTTTTCAACAAGCTGGAAATGTTGTGAGGGTAGAAGCAGAAGGG
AATTGGATGGTTGATTGTCGTGACCAGTGGGAAGgggaagaaggagaaga
aagaGTTCTGAAAGATATGACGAACGAGAAAGGTGAAGAATACGAATACG
GTGATCGCCGTCAAGAATTAGTTTTCATCGGAATGACTTTGAAATATCAA
ACCATACAAAAAATATTAGATGAATGTCTTTTGACTGACGATGAAATGAA
GCTAGGACCGGAGAAATGGTTGGAACAGTTTGGCGAAGATGCTCCGTTGA
GATTGTTCTTAGTAGAGGATGAAGAAGAGGACAGTGAAGAGGACGAAGAA
GAAGATGGAGAGGGAACTGATGATGAGGAGACTGAAAACGAAGATGAAGA
GAAAAGTGAAATGGACGAGAAGAGCTCAGAAAAGACGACGGCTCCCGGTA
AAAAGCGAAAGGTCAAGAAAGATGCGGAGAAtaatgatgatgaagaaaag
aaaaaagaaatcccAGCCAAGAGAAAGAAGAGCAAAAAAGACCTCGATAA
TGAATAAAGAAGAAACTAAACCTGACAAAGAAATCCCAGTCAAGAGAAAT
AAGAGCAAGAAACATTGATTTCTGGGGACCACTTGGATAAAGCTTTGATA
AACATGCTTTGGGATTTGTAAAGATAATTTTCACACATTTTGTACATAGT
TTGGATAACACCATTTTTTTTATCGTGTCAGatttaattcttttttgata
tttctttctACCAATGTCTCATTAGAATAAAATCCTCTCTTGCTATTTAC
CTCGTCGGATACTAAATGTAatcaagaattaaaaaaaaaaccaaagaTGC
ATTTGAAAAAGACTACAANatttaattcttttttgatatttctttctACC
AATGTCTCATTAGAATAAAATCCTCTCTTGCTATTTACCTCGTCGG
Run BLAST on NCBI

transcript from alignment at scaffold_133:307561..314425+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00047645 ID=TCONS_00047645|Name=TCONS_00047645|organism=Clytia hemisphaerica|type=transcript|length=6865bp|location=Sequence derived from alignment at scaffold_133:307561..314425+ (Clytia hemisphaerica)
AAAAGATAAAGAGATTTAAAAATACCAAAGAAAAACAATTGTGCTTTATC
AAACATGGTTGTAGAAGTTGATCAAAAGAATGTCAAAGCTGCATTAAAAG
ATGATGTCAAGGAGGCTGACAAGATCACANGTTGATCAAAAGAATGTCAA
AGCTGCATTAAAAGATGATGTCAAGGAGGTTGCCAAAATTACCAAGGTTC
GTTTATAAACTGCTTttgttttttactttattttttattatccaTCTACA
ATCCCCACcgtaatatttggcacaaaaggggaattcccccAAATTTGAAA
ACCGCAAGTAattttttaagtgctttaaagtacggtttgaaagtagagtt
ttaactctgaattttaacacgagacttaagagttaggaccttaggatctc
aggatctaaaagttcaaaaatgttccaataaggctgagaatatagcctgg
aagccacttaatccctcccaaatcgaaaaatccaatgaaacaaagtggaa
gtactgaaactgcaattctcgctcgatctttaaattctgaaaacgttaaa
atacccaaaagtgtcaatatattttggcgCCGATTGTACTAGACAAATAG
ATAAACGCTAGCCCAATTCACCCAAAAGTTTTCCTTTCAAATAATTATCA
CAagataaaacaatgcaatgaaaGCACTGGAtaacatattatttaaaaat
gatttttagcaATAGGATCATGAGAGTCTTATCCAATTATATACCATATT
TCTAATATAGAAGCAGCCGGATCCAAAAGATCTTTTACCCGTTTCATTGC
TCTGTGGCTTTCTGGGAGCGGGTAAAACAACCCTTCTTAAGCACATCTTG
GAAACCAAACACAATGAAGAGGGCTTTAGATGTGCTGTTATCGTCAATGA
TATGGCAACTCTGAATATCGACAAAAGTTTGATCGATCAGTCAGCCCTTG
TTCAAAGTGACGAAGTCATTGCAATGCAAAATGGTTGTTTTTGCTGCACT
CTTCAAAATGACCTTGTGGATCAAATTGTCTCTTTGGCACAAAAGAATAT
ATTTGATTACATGTTGATCGAGGCATCAGGAGTTTCGGAACCAGCCCAAA
TCGCTCCACTTTTTGATCTTTGTGAAGATGAGCATGACCATGAAGAGGAA
CATCCAGAAGGACCAGAGCTGGGTGAAGTTGCAAGGCTTGATACATGTGT
TACTGTTATTGATGCAGCTGAATTTTACAATAATCTTGAAAGCATGAAAA
TGTACGAGGAAGGGGACATGGTTGGTAGGTTTCACTGATTTATGCCACAG
ATATCTTATTAACGTATCTATACGAGTAGCATACTTGCAATGGCAGTCAA
GGTGGGGGGGGCGATGGTTGGTGTAATAATAAAGAGCTATGTTTTttgca
aacttaatttttgaatttggaaTTATGTGTCAAAATATTTGGCTATGTAG
ATAGAATAATATACCATCTTTCAATTTTAGGAACGATTTCAGAACTTTTG
ATGGAACAAGTGGAGTATTCCAACGTTGTCATCCTCAATAAACAAGATCT
CATAAATGATAAGCAAAGAGCTGATATTCTAGACcgaattaaaattttaa
atccaaGAGCGAAGGTGCTTTCTTCACTTCAAAGTAAAGTAGATGTCAAG
GAGATATTAAATACAAATTTGTACAACAAAGTGGAGATGGATGAAGACTC
AGTGATGTGCTCTGCAACCAGGTAACATATCTCTTATCTTTTATATCTTA
GCATCAGGGAAGCATCTCTTATGAAGAAAGGAGGCAAGATCTTATCATTT
TGAACGAGAATTTCTCAAACTCGTAACACTACCATCTTACAGTATTAATG
TGTTGGGTAttgtaaaacttttttgaagaagaatattttacttttagaaC
TAAACCCAATTATTTTGAGAAGACGTATTGAAATTCCCAATCTTAGAACT
GTCCCTAATTTCCCAATAGGATCTGATTTCACTAGAAAATTTTGCAGATC
TTTCGAATGAGTATTGTGAAAACTTTTCCCTTTTGCTATTGAGACTCGCT
TTTATTTTGGAGAGGTCGTCAGGCTTTAGATTGGAGTTTTTTGGacattt
tacatatttttttagaattaaaGCAGAATCGAATGAGGTTGAACCAGAAT
GTTGCGTTAAATCTGTTGAATCGGGTAAAAAGAAATGTTGTAAAAGTAAA
AAGGCTGAGAACAAGCAAATTATTGATTCCGGAAAATCACAACTATTTCT
TGGAGTGGTGGACAAAATTGCTGGTCAGAAACAACTAACCAGGCACGAAG
AACGCTTTGGGATCACTTCCTTTGTTTATCGGTCAAGAAGGCCATTTCAT
TCAGGACGACTTTGTGGATTATTTTTCGAACCGTTCTTCATCATGAGata
cgaagaagaagaaaatgagttGGATGAGTTGCAAAAGAAAGCAGCAAATA
AACAAAAACGTAGAGTTAAAAAAATTGGTGAACTATTACGTGCCAAAGGC
TTCATGTGGCTTGCAACTTCCCATGAAATCTTGGGTGGTTTTCAACAAGC
TGGAAATGTTGTGAGGTAAGTTCATCAAttctcttaaatattttcataaa
ttattaaGAACAATGAATCTTTACTTTGAATCTTGGGGAGGGGCGCTCGA
GAGGGGCCTTTAAATCTCAAGATTGACTAGTGCTATGACCTTGAAACTTT
GACCAGTGGTAGATATAGATAATTGAAGAtggtttgcaaaattttggttc
GGCCACCTTTCTAgttagtattttacagaccagaccaaacttgaccaaaa
tcatgtattgactgattgacttGTTCGATTTGACGGAAATTTGTTCATAA
AGGCTGATTTGTCAAATAATAGAGACTATTAACAGGAAAAGTTCGTTTCC
ATGAGTATTAGGGAATTtgcagactggtctgtaaaatacatgcTGACCAC
TTGCGGGAACTCATGAACTGCAggagcttttgacttgaaattttcaccag
tgatagatattgaccatctaagacagtgtggtattttacagaccggtcgg
ttttttacctaaaatgatCACTTTCGGCATAACCACTTGTCcgattttgc
taaaattttgggTGCAAGCTTGTATCATCAATACCTAACACTTTNGATAT
TGACCATCTAAGACAGtgtggtattttacagaccggtcggttttttacct
aaaatgatCACTTTCGGCATAACCACTCACCCGATTTTGCTAAAGTTTTG
GGTGCAAGCTTGTATCATTAATACCTAAcacttgtcaaaatttcaatggC
ATTTTCCACTCACTAGATACAGTATCCTAGGGCTGTTTAGGCAAAAAAGG
GTAATTTTGGGCCACTCTGTAAAATACACCATACCAACAGGTggcaaaaa
aagtttaaagtgagAAAAAGCTAGAGGGGGtcctatttttgctattttca
ataaatgatgacgtcatcaggtggtggttacgaaattttcattaaagatG
CTAATTCATATTCATATTTGTTGCCCACTTGCAAGATCTCAAGTcaattg
gataaatatttcaaaatttatcaataaatttcgTTAGGCCCCTCCCAATT
AGAAAAGTTCAAGTTAGCAAATATAGAACGAACAAATACACCTATCAGAG
GAATTatcagaatttttttgtttctgataAATTTACAAGGAAATTCTTTT
CTATGAGTGTAACGACTTCAGACATTTTGACGTCTGTTCTTCCTGGTCAT
CTCCAACAACCCAGTACGCTCAAAAGCTAGGTAGGTGTTTTCGGttcaaa
caaaagattttattctGTTTTTCATTCTATAATAGGGTAGAAGCAGAAGG
GAATTGGATGGTTGATTGTCGTGACCAGTGGGAAGgggaagaaggagaag
aaagaGTTCTGAAAGATATGACGAACGAGAAAGGTGAAGAATACGAATAC
GGTGATCGCCGTCAAGAATTAGTTTTCATCGGAATGACTTTGAAATATCA
AACCATACAAAAAATATTAGATGAATGTCTTTTGACTGACGATGAAATGA
AGCTAGGACCGGAGAAATGGTTGGAACAGTTTGGCGAAGATGCTCCGTTG
AGATTGTTCTTAGTAGAGGATGAAGAAGgtgacatttttgtttttaattt
ataaaaaatcattCTTCTAGCTGTTTCTTTGGTGACTTTGTTGGCGGATC
AACTGCTGTTTTTCCTTTTAATACCACTATCTTTGTAGTCAAAAGGAACC
CCCTCCTTCAATTATTTTTGTCCTAAAGTAAAAAGTCTAAGGGAAACCGA
TGTAGCGGATTATTTTAACTCCTTGTAAATGTCGGCCTCCCCAGTTAAGA
ATAAACTAGAAAATAATGACTCCCCTAGAGTAgaaatttcctaggaaata
tcGACTCCCTTAGTAAATATTGGCTCCCTATAAAGAGGCTGAGAGAGTCG
TGATGAAATAGTTTATAATGATCCCCGACCCCCAAGTAGACAAGAACTGG
AGTCATTGCAGTGCTGTTCGATTCGGTTTTTTACGGAACTGACTTTTGTC
GTTGGGACTCATTTTGGCGAAATTCCTTCATTCTCCAAGGGACTTAAAAG
AGTCTTCAGAATGTGTGGTATTTTTGCATAACAGAATTTCACGTAATTTT
CGGTTGACACGAAGTAAACTTTTATTCCTCAAGAATGTTTACCAAAAATC
TATAGTTAgctacaaccaatcagctgttaggTCTATGGTGTGATgtcgaa
gacattgcagtgggtGCATATAATGAATAGGAAtagtataaaattgttct
ttcattttGTTCGTTTGCAGAGGACAGTGAAGAGGACGAAGAAGAAGATG
GAGAGGGAACTGATGATGAGGAGACTGAAAACGAAGATGAAGAGAAAAGG
TAtactttttgtaaaatttgccaTTTGTCTTTTGCGGACCTACCTGGAGT
TCCTATCAACTCCTAGTTAGTGAGTGAGTGAGTTGCACAAagacgtgttt
ttatagaaaaatgggccaaattcaacatttttttataagcacacaatCAC
TACCAATTACTCagttattagcttttctcgagattggctcattcattCTT
TATGGTTTTTATGCACAAAcgtgcataactataaaccctcgaatgtgacg
gagcatGTTTTTTATTCGGGATTTTATTTTATCTGGGATTTgtattccat
tgttttcaaatcagaaaattcagtggggatggaaaaaatagcacaatatt
ttgcagtcaGATTTTGgttatttgataatttttttgtgagtACAAAAGtt
agaggataattttccacgagacgatattttggctcCAAGGCTTTTAGTAT
TCCCGTTTCGACCTGCgcatagtttttttttgtttttatttcgtcAATGA
AAATTATGTCAAGGGACAGGCAGTTTTCTTGAGATTTGGTTTTTAGTAGT
CCCTATCTGGATTTTGCCGAATCGGtctattcagttttttttaaccTGTT
TTATCATTTAATATAGTGAAATGGACGAGAAGAGCTCAGAAAAGACGACG
GCTCCCGGTAAAAAGCGAAAGGTCAAGAAAGATGCGGAGAAtaatgatga
tgaagaaaagaaaaaagaaatcccAGCCAAGAGAAAGAAGAGCAAAAAAG
ACCTCGATAATGAATAAAGAAGAAACTAAACCTGACAAAGAAATCCCAGT
CAAGAGAAATAAGAGCAAGAAACATTGATTTCTGGGTAGGTTAACTAAAC
ATTCACAACTTGTGTATCAATGAGTTATTGATTGAGAAGTGTGGAGCTTG
GCGCTTGGCACTATCAGTCATCGTCTATAGGCTGCATACAAGGGTGGATT
AAGTTGTGTTCGATGAAATAGGGTTGAACGACACCAGGGGGGGTACaaag
gcagggtactaacccatagccgggtggtggtgtctatttttgcatttcaa
aaaagttagtacccgttACTACTTTAGGGGTGGGGGTGTGTATTTATCAC
TCTTCTAGCAAGTACAGGgtactatttgggtactttttcacagagTTTTN
tgtatttttcactcttctAGCAAGTACAGGgtactatttgggtacttttt
cacagagttttgctcctttttcaataaaaaaagtagtcttttgtaatatt
ttgatttttttcaaatatatttttttttaattgagaaactttttttttaa
ttgagaaacttttttttactctttttgatttttgtgaagacAAAACTTCC
GAAATGGTCAAAAAGTGTGTTATTAAAATCAAAAGACAAAAGCCTCTGAC
TTAATCAATGATAGTTTGTTTGAATTATCTGTCCAtttcagtcagaaaaa
ctaACATAGTACCCCCCCCCTGACGACACAAGTTTCTAGTTAAAAAAGGA
ATTGAAACtattttattcatgatattcattacgtaatATTTTCCATGGAA
CCATCccagtttttgccagtagtggttTCTTGGCTcgaatttctttgaat
tttcttGAGCACTTTGTAATTCAATTTATTTCATTGTATTTCAGGGACCA
CTTGGATAAAGCTTTGATAAACATGCTTTGGGATTTGTAAAGATAATTTT
CACACATTTTGTACATAGTTTGGATAACACCATTTTTTTTATCGTGTCAG
atttaattcttttttgatatttctttctACCAATGTCTCATTAGAATAAA
ATCCTCTCTTGCTATTTACCTCGTCGGATACTAAATGTAatcaagaatta
aaaaaaaaaccaaagaTGCATTTGAAAAAGACTACAANatttaattcttt
tttgatatttctttctACCAATGTCTCATTAGAATAAAATCCTCTCTTGC
TATTTACCTCGTCGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_030343XLOC_030343Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00047645-exon-scaffold_133-1491911889:307561..307674TCONS_00047645-exon-scaffold_133-1491911889:307561..307674Clytia hemisphaericaexon
TCONS_00047645-exon-scaffold_133-1510915933:307561..307674TCONS_00047645-exon-scaffold_133-1510915933:307561..307674Clytia hemisphaericaexon
TCONS_00047645-exon-scaffold_133-1575043694:307561..307674TCONS_00047645-exon-scaffold_133-1575043694:307561..307674Clytia hemisphaericaexon
TCONS_00047645-exon-scaffold_133-1491911889:307739..307756TCONS_00047645-exon-scaffold_133-1491911889:307739..307756Clytia hemisphaericaexon
TCONS_00047645-exon-scaffold_133-1510915933:307739..307756TCONS_00047645-exon-scaffold_133-1510915933:307739..307756Clytia hemisphaericaexon
TCONS_00047645-exon-scaffold_133-1575043694:307739..307756TCONS_00047645-exon-scaffold_133-1575043694:307739..307756Clytia hemisphaericaexon
TCONS_00047645-exon-scaffold_133-1491911889:308324..308834TCONS_00047645-exon-scaffold_133-1491911889:308324..308834Clytia hemisphaericaexon
TCONS_00047645-exon-scaffold_133-1510915933:308324..308834TCONS_00047645-exon-scaffold_133-1510915933:308324..308834Clytia hemisphaericaexon
TCONS_00047645-exon-scaffold_133-1575043694:308324..308834TCONS_00047645-exon-scaffold_133-1575043694:308324..308834Clytia hemisphaericaexon
TCONS_00047645-exon-scaffold_133-1491911889:309041..309281TCONS_00047645-exon-scaffold_133-1491911889:309041..309281Clytia hemisphaericaexon
TCONS_00047645-exon-scaffold_133-1510915933:309041..309281TCONS_00047645-exon-scaffold_133-1510915933:309041..309281Clytia hemisphaericaexon
TCONS_00047645-exon-scaffold_133-1575043694:309041..309281TCONS_00047645-exon-scaffold_133-1575043694:309041..309281Clytia hemisphaericaexon
TCONS_00047645-exon-scaffold_133-1491911889:309676..310125TCONS_00047645-exon-scaffold_133-1491911889:309676..310125Clytia hemisphaericaexon
TCONS_00047645-exon-scaffold_133-1510915933:309676..310125TCONS_00047645-exon-scaffold_133-1510915933:309676..310125Clytia hemisphaericaexon
TCONS_00047645-exon-scaffold_133-1575043694:309676..310125TCONS_00047645-exon-scaffold_133-1575043694:309676..310125Clytia hemisphaericaexon
TCONS_00047645-exon-scaffold_133-1491911889:311396..311688TCONS_00047645-exon-scaffold_133-1491911889:311396..311688Clytia hemisphaericaexon
TCONS_00047645-exon-scaffold_133-1510915933:311396..311688TCONS_00047645-exon-scaffold_133-1510915933:311396..311688Clytia hemisphaericaexon
TCONS_00047645-exon-scaffold_133-1575043694:311396..311688TCONS_00047645-exon-scaffold_133-1575043694:311396..311688Clytia hemisphaericaexon
TCONS_00047645-exon-scaffold_133-1491911889:312381..312459TCONS_00047645-exon-scaffold_133-1491911889:312381..312459Clytia hemisphaericaexon
TCONS_00047645-exon-scaffold_133-1510915933:312381..312459TCONS_00047645-exon-scaffold_133-1510915933:312381..312459Clytia hemisphaericaexon
TCONS_00047645-exon-scaffold_133-1575043694:312381..312459TCONS_00047645-exon-scaffold_133-1575043694:312381..312459Clytia hemisphaericaexon
TCONS_00047645-exon-scaffold_133-1491911889:313077..313295TCONS_00047645-exon-scaffold_133-1491911889:313077..313295Clytia hemisphaericaexon
TCONS_00047645-exon-scaffold_133-1510915933:313077..313295TCONS_00047645-exon-scaffold_133-1510915933:313077..313295Clytia hemisphaericaexon
TCONS_00047645-exon-scaffold_133-1575043694:313077..313295TCONS_00047645-exon-scaffold_133-1575043694:313077..313295Clytia hemisphaericaexon
TCONS_00047645-exon-scaffold_133-1491911889:314105..314425TCONS_00047645-exon-scaffold_133-1491911889:314105..314425Clytia hemisphaericaexon
TCONS_00047645-exon-scaffold_133-1510915933:314105..314425TCONS_00047645-exon-scaffold_133-1510915933:314105..314425Clytia hemisphaericaexon
TCONS_00047645-exon-scaffold_133-1575043694:314105..314425TCONS_00047645-exon-scaffold_133-1575043694:314105..314425Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_133supercontigscaffold_133:307561..314425 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
8.94362	1.36569	6.11932	8.40857	16.2295	0.964083	8.90408	3.45521	7.22975	6.647	1.38572	3.15803	7.37778e-06	5.29014	7.89866	11.6815	11.0947	17.7736	4.81384	5.1026	0.0444068	8.77791	2.83895	16.6694	12.4509	14.7426	11.4412	0.0408103	0.0161967	8.15775
Blast
[Close]
BLAST of TCONS_00047645 vs. Swiss-Prot (Human)
Match: CBWD2 (COBW domain-containing protein 2 OS=Homo sapiens GN=CBWD2 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 1.257e-21
Identity = 67/233 (28.76%), Postives = 129/233 (55.36%), Query Frame = 1 
Query:  154 LPVSLLCGFLGAGKTTLLKHILETKHNEEGFRCAVIVNDMATLN-IDKSLIDQSALVQSDEVIAMQNGCFCCTLQNDLVDQIVSLAQ-KNIFDYMLIEASGVSEPAQIAPLFDLCXXXXXXXXXXXXXXXXXXVARLDTCVTVIDAAEFYNNLESMKMYEEGDMVGTISELLMEQVEYSNVVILNKQDLINDKQRADILDRIKILNPRAKVLSSLQSKVDVKEILNTNLYNKV 846
            +PV+++ G+LGAGKTTLL +IL  +H++   R AVI+N+    + ++KSL         +E + ++NGC CC+++++ +  I +L Q K  FDY+L+E +G+++P  +A +F                 ELG    LD  +T++D+         +K   E    G I+E    QV  ++ +++NK DL+ ++    +   I+ +N   ++L + +S+VD+  +L+ + ++ +
Sbjct:   42 IPVTIITGYLGAGKTTLLNYILTEQHSK---RVAVILNEFGEGSALEKSLAVSQGGELYEEWLELRNGCLCCSVKDNGLRAIENLMQKKGKFDYILLETTGLADPGAVASMF-------------WVDAELGSDIYLDGIITIVDSK------YGLKHLAEEKPDGLINE-ATRQVALADAILINKTDLVPEEDVKKLRATIRSINGLGQILETQRSRVDLSNVLDLHAFDSL 251
The following BLAST results are available for this feature:
BLAST of TCONS_00047645 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CBWD21.257e-2128.76COBW domain-containing protein 2 OS=Homo sapiens G... [more]
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