TCONS_00047660 (transcript) - C. hemisphaerica

Overview
NameTCONS_00047660
Unique NameTCONS_00047660
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length660

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00047660 ID=TCONS_00047660|Name=TCONS_00047660|organism=Clytia hemisphaerica|type=transcript|length=660bp
tttcagtCCACTATAAACAAACAAATCAATAATAAAGATGGGccaacaag
caagcaaagaacTGAATGATGAAATTCAAATAAGTAGTACAATCTCCAAA
AAACTGGTCAACGACCCATCCCAATGTGTTACTGAGAGCTTACAAGGCTT
TGTAATGACAAATCCAGATGTTAAATTACTGGAGGGACACAATGTGGTTG
TTAGAGCTGACCTTGCTGATTTTCGTGAATCAAACAAAGTGGCACTCATA
ActgGTGATCGTTTAAATTTTGGTAAAGCAGCTGAAATTGCCAAAGGTGA
TGGTATTGATGTTGAAATGGTGGTTGTAGCTGACGATTGTGCTTTGACCA
GTCAAGATAAAAGTGCTGGGCGGCGTGGTCTTTGTGGAACCATCTTAATA
CACAAGATGGCAGGAGCTATGTCTGAACAAGGAAAGTCTTTGAACGAGAT
GGCTCAATTCTTACGTGAAGCTGTCAAAGAAATTGgtACAATCAGCATCA
GTTTATCACCATGCTCCATCCCTGGCAAACCTGTCAATTTCACCATTGAT
GATGATGCTGTTGAATTCGGTCTTGGTATACACGGAGAAGCTGGTGTTTC
AAAAATCAAGATTGGAACAGCAAATGAATTGGTGTCTAAAATGCTACAGC
ATGTTCGTAA
Run BLAST on NCBI

transcript from alignment at scaffold_133:123266..134177-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00047660 ID=TCONS_00047660|Name=TCONS_00047660|organism=Clytia hemisphaerica|type=transcript|length=10912bp|location=Sequence derived from alignment at scaffold_133:123266..134177- (Clytia hemisphaerica)
TTTCAGTCCACTATAAACAAACAAATCAATAATAAAGATGGGCCAACAAG
CAAGCAAAGAACTGAATGATGAAATTCAAATAAGTAGTACAATCTCCAAA
AAACTGGTCAACGACCCATCCCAATGTGTTACTGAGAGCTTACAAGGCTT
TGTAATGACAAATCCAGATGTTAAATTACTGGAGGGACACAATGTGGTTG
TTAGAGCTGACCTTGCTGATTTTCGTGAATCAAACAAAGTGGCACTCATA
ACTGGTGAAATTTGTTTATTTTCTTTCTTATGTCATGTTTTTTTTTATTT
GGATTCTTCAAAGTTAATGAATGAATGAATGAATGAATGAATGAATGAAT
GAATGAATGATCGAAGTAAAGTATCAAAGTGAACTAATATGAGTAAAGTC
CAAAATGAAGATAGATAAACTACTGATTCTACGCTCTTTCACCTTCTCAC
TAAGGCTTTCACTGTCTCTCTCTCTCACTAGTAGTAGTAGTAGTGTGAAG
GCTTCGATTGCAAACACTTCTGGGCTGGGAGTTNATCTCTCTCTCTCTCT
CTCTCTCACTAGTAGTAGTAGTGTGAAGGCTTCGATTGCAAACACTTCCG
GGCTGGGAGTTAGAGAGACGTTGTGATGGTTAAGTCGCTCTACTTTCATG
AATAGATATTTTTCAATCAAGAGTAAAGCATACTAATGACCGAATTCTTA
GCAGTACAGGTTCTTACTAGAAAGCCAGATTTGATTGATTGATTGATTGA
TTGATTGATTGATCGATTGATCGATTGATTGATTGATTGATTGATTGATT
GATTGATTGATTGATTGATTGATTGATTGATTGATTGATTGATTGATTGA
TTGATTGATTGAAAAAGGTGGTGGTAGTGGACACGAACCATTTGCGATTG
GTTATGTCGGGCGTGGTGGTTTAACCGCCAGCGTGGTGGGCGGTGTTTTC
ACTTCTCCTACTTCACAATCGATCTACAACACCATCACGAATTGTTATCT
TCAAAGNTTCTCCTACTTCACAATCGATCTACAACACCATCACGAATTGT
TATCTACAAAGATTCGCCAATCCTTGTGTTTTGCTTATTGTAACTAATTA
TACAGGTTTGTTTTTGAAAATGTTTGGGAGAAAGTATTTCAAGATAACTG
TTTTTGGTAATTAGTTGTAGCTGCTCCAGTCCAATAACTACATAGTCCTA
AAATATGTTTATTCTATATTATCTAAATACGTGAAACCTAGTCAGTTTCA
GTGGAGTCTTTTACAAACCTCTATAATTCGAATGTCTCCTTATCTTAAAC
AAGTTTAATGGCCCATTCAGTTAACAATGTCTTGTAAACCTTACTCGTTA
ATTCGAAATTTACTTAACTGATGCGCGCTTATTCGAATTATGGAGACTGC
ACTGTATTAATCGAACCAACTTGAACATTAAATTTATTTTGAGAAAAAAA
GAAACATAGAATTACTGAAAGACAGTCATTTTGAAACCCTTTCTCCAAAC
ATTCTTTTATCCACTTTTTTTTTAATTACGTCACTATTTTTCATCTTTAT
CAAAAGGTGGAGGATCTGGGCATGAGCCTGCACATGTTGGATTCATAGGC
AAAGGAATGCTGACGTCAGCAGTTTGTGGGGATATTTTTACGTCGCCGAC
TTCGATCTCTATATTGGATACCATACGGTCTTGTGCCAATAAGGGCGGTT
CCGCTTTACTTATTGTTAAGAATTATACTGGTAAGACTTGGCTGATATAC
TGCCAACCTAATTTTTTTGGACCTACCCCGGTGGGGTGGAGGTCCTATAA
ATTAACCTTTGTCTGTTTGTTCGTCCGTTCGTCCGTTCGTTCGTTATTAG
CTTTCCTAGTGATTGGTTCATTAGTTTTTTCTGATTTTTTGCACAAAAAG
ATGTATAACTATATACCCTCGAATGTGAGGGAGCCCGACTTTCGAAAAAA
AAAATTTGGGGGGAAATTTGGGCCAAAAAACGGCTAAAAAACGGGTTTTT
TGGACTTTGTGAAAAATTAGATCATTAACTTTGTTAATGCACATTATCAA
TTACTTAGGTATTAGCTTTTTTCGATATTGGCTCTTTGATTCTTTATGAT
ATTTTGCACAAAGATGCATTACTATAAAGCCTCGAATGTGACTGAGCCCG
ACTTTTTTGGGCTAATTTGGGCCAAAAAATGGATAAAAAACGGGTTTTCT
GATTTTTTACCATCATAGGTAAAAGATGGCTCAAGCAGATTTTTTCAAAA
AAAGTTTGTTGGCTCAAAAAACGCATGTTTATCTATAAGAACCACTATTA
ATAAGCATACATCAATGTTCTTTGTTAAATTNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNGATTAGCCTGTTAGACGAAAACCGCTTTTTTATC
GCGATTTAACGTCTGTTACTTTTTGCCGTGGAATCGAATGTTCTTGGACG
GGAAAGTCCGTCCAAGCTTTTCTCTTCGGCGCAGCTCATTTTGCCGTGAC
TTTGGACGAGCTGCACTTCATCGCGTGTGCTTTTTTCGTTTTTTAAGAAG
GCGCTGCATTATCGATCGGTAAAGTTCAAATAGATTTTCGAACTTTCGAA
TTTTGTAATTCGAATTTTGTGATTCGAATTTAGAATTTTTATTGAGAGAG
AACCAAAATCATTTGTTTTGAAAAGTTGAAACCGAACGAAAAAGAAACAG
TATCAGTGGATGGAGGAAAAAAGAAGATGGAAATCCTTTTTTTGCATCAA
CAGCAGCAGAGTTATTGGGTTATTTCCATAACAGGATTGAAGAATCCCAG
AGATTAACTGTAAACATTGAGAATGAAAATTATCAAATCAAATTAGATCC
TATCCTACCTAGAACCATAAGTGCTGCAATACAATGATGATTGAAGACGA
ACTTGTACTTTTTGTATGCTTTGGGATGGCAACGAATATCTTTTTGATAT
GGCATGAAACCTGGAAGAATTTATTTTGTTTATTCCGGGCCTATTCCAGT
AGAAAGAAGAACTGTTTGTTTGTTATTGTTTTTATTGGCTGTTCGATGTG
GTCTCTATCTGGTCGCTAGTTTGAAAATATTCCATTAATAAAATGGTGGA
AAGTAAATTGACATATGATTGAAAGTAAAGTGAAATTTGATTGTATTCGA
TTCGAAAGTTTGCTGGGAATGGANNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGATAT
TATTCTAGAATTTTTACATTTTAATGTGAAGAGTCTGGTCCTGTATAATC
AGAGTTAAAACTACTAATTAATTTTGAGATCTCGAGCAGATTGTAGATTT
AAATTTCTCAACTTTGGAAACTAGATTGTCAGCCAGTAAAATGTGGAGGT
TTTGCTTCGAATTGTGAGAGGAATCTACCTAAATTTTATTAGTTTTATCT
AACTTTCCTATAAATTTATATTNTAAAAAAAACATTTTCACCTCACGAAA
CTCCATCCCGATCCCGAGGATTCTTTTGTTTTGATTTTAATGCACGGAAC
TCGAAAATTGAGACTAGATTGAACATCAACGCACATCCTCTCCTACCTAT
TCGATCGCCCGTTCCAGTCTTTATTTTCGAGTTCCGTGTTTTCCCGCCCT
TATGCACTCCGCACGGGATCGACGTCACCCTCCACCACAGTGCGATAACT
TTCGTCAAACGCTTCAAAGTGTAACTGACCATAAAACAAAGAAAAAATTT
GGTTTGTGGGAAGGCACTGGCTAGTAAAAGATGGCTCAAGCAGATTTTTT
CAAAAAAAGTTTGTTGGCTCAAAAAACGCATGTTTATCTATAAGAATCAC
TATTAATAAGCATACATCAATGTTCTTTGTTAAATTAATCATTTTTTTAT
GAGACAGATGTTTTTTTTGCTCACAAAGTCTTGAATATTTCAAGAGCATG
AAATTTTGGTTTCTAAACGTTTTTTTATAAGAAACAAACGACTAATTTTA
ATAGATCGTCACTATTTGTGTTCTGAATTATTGTTTAATGGTCACGCTCA
CGTAGATATCAATTATATATTATGTGTTAAATGCAAAACCAGGTAGGTCC
ATAAAAGTATCACTTGTTTCTTCATATTTTTATAACGTTGTTTCTGCGTG
GGTTATTACTAACTATGTATAAACCAAGGGATTTTGAAAAAATTTATCGC
AAAAAGAGCTTATCACTTCTGGCTGTGTGATTTGCCCTTATTGGCGCCAG
CCCCAATTTGCCAGACGAGATGGAGTTTTTATAAGATACTTTAATAATTG
GTCATTTAAGTAATAAAATGACGCGTTCTTTAAAAAAAGTAACAAAATTG
TTTTATTACTGGTTAACGACCAACCAAATCAAATAAGAGCTTGTAAAAAC
CCCATCTGGTCCCAAATTTGCTGAATTGAAAAAAAGTAGTAATTGGTACA
AAAAGGGCTAAAAAGAAAATTATTTCAAACCCTTAGAATCACTTTGAATT
TATCATTTACCTTTCTTATTACATCAGGTGATCGTTTAAATTTTGGTAAA
GCAGCTGAAATTGCCAAAGGTGATGGTATTGATGTTGAAATGGTGGTTGT
AGCTGACGATTGTGCTTTGACCAGTCAAGATAAAAGTGCTGGGCGGCGTG
GTCTTTGTGGAACCATCTTAATACACAAGGTATTTTCGTTAGAGGGTGGA
TGGGTACCCCCAAAAACCATAAGACATCTCTGATAGTTGTTTCTCACGGA
ATTTCTTTTGCTAAAAGGTGGGCCAAAATCGAACTGCCCCCCCCAAGTCA
TTACCAGGCCCATTAAATTTCACTGTCCAAACTCAAATTCTTTTCTACTG
TCTGTAATGCCTCCCGCTTGGCCAAGTAAGTTGGTTATTGAATCTGTGGG
CTTCGAATTAATTTTCCTTTGGTTCATTGTAATCCAATTCCCAACCCGGC
GGAAATAAGGCCCCGTGAATAATTTGAAGATTTTTTATAACTCTGTCCAT
GTTTAGACTAGAGTCTGCCTCTCACTGAACTTTGCTTTCTAACGATTTTN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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CAACCGTAACACGGATGTTTTTTGAGAATCAAGGCAAGTTGGTTATCTAT
TGTTTTTACATCGTTGGGTGGGCCAAAATCGAACTGCCCCCCCCCCCAAG
TCATTACCAGGCCCATTAAATTTCACTGTCAAAACTCAGATTCTTTTCTA
CTGTCTGTAATGCCTCCCGCTTGGCCAAAAAGTTGGTTATTGAATCTGTG
GGCTTCGAATTAATTTTCCTTTGGTTCATTGTAATCCAATTCCCAACCCG
GCGGAAATAAGGCCCCGTGAATAATTTGAAGATTTTTTATAACTCTGTCC
ATGTTTAGACTAGAGTCTGCCTCTCACTGAACTTTGCTTTCTAACGATTT
TGATGGCGGCGAGTCTAGTGAAGTAGACTAGAGGATATCGCCATCTTGGA
ATTTTTCACTTTTGTTTTCTAAATTATAAGCAAACATTAAAATATATTCT
AAAACCCCATCAAAGTTTATGAAACTATGATGAAAACATGAAAATACCTA
AAAATTTGAAAAAAGATTGGTCTGTTGGCCATGGTTTTCTGTTTGTTATT
CTCCAGAAAGGAACTGGATCTAGTGGCATCGATTTGCTACCACCTCAAGA
AAAGCCAAATAACGCCGGGCCGCTTATCAGTGCAATCCAGTCTATCAAAA
AGCTATAAGTATATTAGGCATCTCACAGTCATGACTCATAAAGTGGTCAA
ATGAGTTGGAATTACTAGCGACGTGGGCTATTCTAGATTTGTTTACTTGA
TCCTTTTACTTCTGGAATAATAAAAAAATTTTAAATTCGATAAACCCATG
GATTTAAAGGAATTCCGGCACAAAAAATGAAATTTTGTCAGGGCATAGCT
ATCATGAAAAGCATTTGAAAAATTCAAAGAGTACAGATGTCTTGAATTTG
AAACTTTGGATGTCAATATCTTAGGATAGAATCACTGTTGACAACTTTGA
CTTGGATTTTTCAAATGTTTTTCATTATAGCTATTCATGGATTAAGTTTC
ATTTTTTGTGCCGGAATCCCTTTAATATCAACCCATGGTAATATATATTC
TATTGATACTTTCAGATGGCAGGAGCTATGTCTGAACAAGGAAAGTCTTT
GAACGAGATGGCTCAATTCTTACGTGAAGCTGTCAAAGAAATTGGTATGA
ATGGCTTTATTAAATCTCTACTATTTTGAAGGGAAATTTTCGCAAGATTT
CATCAGTTATCCATATTTTTGGTTTTGAGCCCTCTGAGTATCCCACTATC
ATCTGAATAATGGTTTTTGAGAGCATTTTATTTTCAAGTCACCCACTTAT
AAGTCGCTAACAATAATCCTAATGACAAAAACATAATTTACACGCTTTTT
TTATGAGAATATTTATAATGGCAAAAAATTAAGAATATGCTAACAATAAC
ACTAATAAAGCCAGTTTTTAGGGCATTTTAATTGTAAATCCCTAATTATC
CCCCAGTAGCCTTCGCAAAATGCCAAATATGTACTACAGGTATGTATTTC
ATGATAGATTTAGGCTGGGTTAGATCGTGAGGATGGTTTTCGCCAAAAAT
CCATCATAAAAAAAAAAAAACATTCTTATAAAAAAATACGTATACCCTTA
TGTACTAATTTCACTACTTTTCTTTTTCCTAGGTACAATCAGCATCAGTT
TATCACCATGCTCCATCCCTGGCAAACCTGTCAATTTCACCATTGATGAT
GATGCTGTTGAATTCGGTCTTGGTAAGATTCAGACAGTATGGTATTTTAA
CTTCTTCCCTTCAATAATTTAATAATCCGGCAGTTTCAATTTCATTGATT
TGCAAAAGAAATCAAATTCGCTGCGCATGGTTTCCTAAGGTTTCTTTTTG
GACCTACCCCGGTGGAGGTCCTATAAATTAACCTTTGTCCGTTCGTTCGT
TCGTTCGTTCGTCTGTTCGTTCGTTCGTTATTAGCTTTCCTAATAATTGG
CTCGTTAGTTTTTTCTAATTTTTTGCACAAAGATGCATAACTATAAACCC
TCGAATGTGACGGAGCCCGATTTTCAAAAAAAAAAAATTGGGGCAAATTT
GGGCCAAAAAACGGCTAAAAAACGGGTTTTTTGGAAAAATTAGGTCGTTA
ATTTTTTCTGATTTTTTTGCATGAAAGTAGGGTACCATCGTAGGTAAAAG
ATGGCTTAAGTGAATTTTTGCAAAAAAAATTTGTTGGCTCAAAAAATGCA
TGTTTATCTATAAGAATCACTATTAATAAGCATACATCAATGTTCTTAGT
CAAATTACTCAATTTTTTTATGAGATTTTTGCTCAGGAGGGCTTACTTTC
AAAGAATATGTGTGTTTCGGCATGATGTTTTGGTTGCTTGGCGTGTTTTT
ATAGAATAACTGGCCAAATTCGATATTTTTTTATAAGCACATTATCAATT
ACTTAGGTATTAGCTTTTCTCGAGATNNCACCATCATAGGTAAAATACGG
TTCAAGCAGATTTTTGCAAAAAAATTGTAGTTGGCTCAAAAACGCATGTT
TATCTATAAGAATCACTATTAATAAGCATACATCAATGTTCTTAGTCAAA
TTACTCAATTGTTTTTATGAGATAGATGTTTTTTTTTGCTCATGAGAGCT
TACTTTTAAAGAATATATGTGTTTCGACATGAAATTTTGGTTGCTTGGCT
TGTTTATAGAAAAACTGGCCAAATTCGATATTTTTTTATAAGCACACTAT
CAATTACTTAGGTATTAGCTTTTCTCGAGATTGGCTCTTTTATTCTTTAT
GATTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTCCGTTTTACCACCCTAAA
ACCGTCCCAGTCTTTTTTGCGCCTACAAACAACAACAAAAAGACTGGGAC
GGTTTTAGGGTGGTAAAACAGACAAAGAAATGCCCGCGCGGCAATTGAGG
GCTACGGTCGAAAAGGCGTATTTAAAAAGACAGCGTTAATTCTTTTAGGT
ATACACGGAGAAGCTGGTGTTTCAAAAATCAAGGTAATTTTAGTCAAAAC
TAAAATCTCATTAATTTCTTACTATGAATTTAAGGCAAATGTTTCAACCT
TTGGTATTACTAGTCATTTTTAGTGCTAATTTAGGAAAATATCAGTACAA
CTCCATTTTCCCAGGTGTTTCCGAGTCTGCGAAGCTTGTTCTCAGTTTTT
TTTGCCATCGATGTATTATATGTTCTTATATAGTTGCTTCTTATAGAAAA
ACTTGTAACAGAAAAGTCTCCCCCTAGTACGTATAGGGATGATATATCTT
TTTTAACTTTAGATTGGAACAGCAAATGAATTGGTGTCTAAAATGCTACA
GCATGTTCGTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_030350XLOC_030350Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00047660-exon-scaffold_133-1575043694:133924..134177TCONS_00047660-exon-scaffold_133-1575043694:133924..134177Clytia hemisphaericaexon
TCONS_00047660-exon-scaffold_133-1575043694:128099..128250TCONS_00047660-exon-scaffold_133-1575043694:128099..128250Clytia hemisphaericaexon
TCONS_00047660-exon-scaffold_133-1575043694:125784..125862TCONS_00047660-exon-scaffold_133-1575043694:125784..125862Clytia hemisphaericaexon
TCONS_00047660-exon-scaffold_133-1575043694:125206..125295TCONS_00047660-exon-scaffold_133-1575043694:125206..125295Clytia hemisphaericaexon
TCONS_00047660-exon-scaffold_133-1575043694:123595..123629TCONS_00047660-exon-scaffold_133-1575043694:123595..123629Clytia hemisphaericaexon
TCONS_00047660-exon-scaffold_133-1575043694:123266..123315TCONS_00047660-exon-scaffold_133-1575043694:123266..123315Clytia hemisphaericaexon
TCONS_00047660-exon-scaffold_133-1510915933:133924..134177TCONS_00047660-exon-scaffold_133-1510915933:133924..134177Clytia hemisphaericaexon
TCONS_00047660-exon-scaffold_133-1510915933:128099..128250TCONS_00047660-exon-scaffold_133-1510915933:128099..128250Clytia hemisphaericaexon
TCONS_00047660-exon-scaffold_133-1510915933:125784..125862TCONS_00047660-exon-scaffold_133-1510915933:125784..125862Clytia hemisphaericaexon
TCONS_00047660-exon-scaffold_133-1510915933:125206..125295TCONS_00047660-exon-scaffold_133-1510915933:125206..125295Clytia hemisphaericaexon
TCONS_00047660-exon-scaffold_133-1510915933:123595..123629TCONS_00047660-exon-scaffold_133-1510915933:123595..123629Clytia hemisphaericaexon
TCONS_00047660-exon-scaffold_133-1510915933:123266..123315TCONS_00047660-exon-scaffold_133-1510915933:123266..123315Clytia hemisphaericaexon
TCONS_00047660-exon-scaffold_133-1491911889:133924..134177TCONS_00047660-exon-scaffold_133-1491911889:133924..134177Clytia hemisphaericaexon
TCONS_00047660-exon-scaffold_133-1491911889:128099..128250TCONS_00047660-exon-scaffold_133-1491911889:128099..128250Clytia hemisphaericaexon
TCONS_00047660-exon-scaffold_133-1491911889:125784..125862TCONS_00047660-exon-scaffold_133-1491911889:125784..125862Clytia hemisphaericaexon
TCONS_00047660-exon-scaffold_133-1491911889:125206..125295TCONS_00047660-exon-scaffold_133-1491911889:125206..125295Clytia hemisphaericaexon
TCONS_00047660-exon-scaffold_133-1491911889:123595..123629TCONS_00047660-exon-scaffold_133-1491911889:123595..123629Clytia hemisphaericaexon
TCONS_00047660-exon-scaffold_133-1491911889:123266..123315TCONS_00047660-exon-scaffold_133-1491911889:123266..123315Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_133supercontigscaffold_133:123266..134177 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
9.70102	10.9771	9.7761	9.81329	3.6764	0.0262178	0.752011	0	2.01125	4.88487	9.91615	8.05646	12.9173	8.80099	9.49576	10.0959	6.48451	10.284	7.18388	6.25017	10.4864	13.2602	8.29623	13.0436	0.3933	1.41344	14.9047	12.2227	12.9464	9.38286
Blast
[Close]
BLAST of TCONS_00047660 vs. Swiss-Prot (Human)
Match: TKFC (Triokinase/FMN cyclase OS=Homo sapiens GN=TKFC PE=1 SV=2)

HSP 1 Score: 154.836 bits (390), Expect = 1.776e-43
Identity = 77/135 (57.04%), Postives = 97/135 (71.85%), Query Frame = 2 
Query:  251 TGDRLNFGKAAEIAKGDGIDVEMVVVADDCALTSQDKSAGRRGLCGTILIHKMAGAMSEQGKSLNEMAQFLREAVKEIGTISISLSPCSIPGKPVNFTIDDDAVEFGLGIHGEAGVSKIKIGTANELVSKMLQHV 655
            TGDRLNFG A E A+ +GI VEMVV+ DD A T   K AGRRGLCGT+LIHK+AGA++E G  L E+A+ +    K +GT+ +SLS CS+PG    F +  D VE GLGIHGEAGV +IK+ TA+E+V  ML H+
Sbjct:  112 TGDRLNFGLAREQARAEGIPVEMVVIGDDSAFTVLKK-AGRRGLCGTVLIHKVAGALAEAGVGLEEIAKQVNVVAKAMGTLGVSLSSCSVPGSKPTFELSADEVELGLGIHGEAGVRRIKMATADEIVKLMLDHM 245
The following BLAST results are available for this feature:
BLAST of TCONS_00047660 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TKFC1.776e-4357.04Triokinase/FMN cyclase OS=Homo sapiens GN=TKFC PE=... [more]
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