TCONS_00047662 (transcript) - C. hemisphaerica

Overview
NameTCONS_00047662
Unique NameTCONS_00047662
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2026

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00047662 ID=TCONS_00047662|Name=TCONS_00047662|organism=Clytia hemisphaerica|type=transcript|length=2026bp
ctttggattttagaacccccggataaaaaattttgccgtgccgcgaacaa
gaagtttgaaaaaactcacccgcgagtactcattttcaaattttgaagga
aaataaagacatgatgtgctgattttttctgtaaaagaaagctgaataaa
ttctctacactttggaaaaaatacttatgtCAAAAGAGGTTTCCTTCTTT
GAGGTTGTGGTCAAAAATACATCACCACTACAACTAGAGAGTTTGAGGAA
ACGTATATTGTTTGTTGTCATATTTTGCAACATTGTGTTCTTAACAACTG
ATATTGTCAGTTCATTCTATGGTCTGCATGCTTCTGGGAAGCAAACTTAT
ACCATTATTCGTGTTGTGGTTGATTATCTCATGTTTATGTTTGCAGCACT
AGTTCTATGTTATTGCATAATCAAGTTAACTAAGCTGCAAACAGCCAAGC
TGACCTTGGATGGACAGGGTGTTTCCTACTGTCAAGCAGTCACAACATGT
ACTATCATTGCCCTGCTATACATCAGCAGAGCATTTTACAACATCTTAGC
TGTTTCACCCATACATCTTCCAACTTTTGGTTATGGTTGGATAAATGTCT
CAGACCAGGGGGAAGAAGGACAAGATGGCTATGTGAAGGAAACTACAGAG
GATTATGCATTTATTTCTTTTGGATGTGTGTTATTTGTCTGGGAGCTTCT
CCCAACATTTACTATCGTTTGGTTTTTCAGGGTCAGACAGCCTGAAGGCA
GACTGACTTCAAGTGGGTCAAAATCGGATAGTTATCATGCAAAGATTTAT
TTCTTTGACAATCCTAATCGTTATGATTCAGATGATGATATGGCTGTGCC
TTACACACCACCTTCACACACTGGGCTTCTCGGTGCGCACTCATTTGGGG
CTCGTGGAAGTTCACCTCAAAACTCTTATCCAAACCGGAAAATTGTTTCC
TCATATGGGTCAGTGCCACCATACACAGGAAGTTATAACCAATCTGTTGA
AAGTACGCAAAGTCCACTTATCCGTGGAACAACACCACCTCTTCTTTTTC
CAAGGACATCTCTTGGGCACACGCAACAATCACCAACTTCAATACTCAGA
CATCATCATACCAAAGACACTCAATCACCAGTACCTTAACTTTTTTTAGT
ATTTCTTCGAAGTTCTCGAAAGGGAAGAAACTTTTTGCTAAACAACACTC
AATAATGAAACATCAATAAAACTTAAGTATTAATTCACGTCCAGGAATGA
ACTTTACTCTATTCTCCTATGTGTAATTGATGAGTACTTTGCTGATGCAA
AAAAGTCCAAACTATGAAATTAATCttaagttttctttttacaaCCTTCG
GATTTTACAATTTGTAATTCCAAGAAAATTTCTGAACTTCCTTCTATTGT
TATAGTTCTTTCCCTCATAACTCCTTCCCTTATGTATTTCATATTTAATA
ACACTTCACACTTCAATTTAagttattttggaaaaatttataaattatat
tattataaaaaatagatCTAAAAAGCTTGATTCCTTAGAAAACTTTAGTA
ATGCTTTGCcttaaatttcatatttttggcatatcttgtttaaaaaaata
ctctTCTTTATTGACGAAATAAGTATTATATTAGAGCTTAGATTATATCA
TAGTAGTGATTCAGTTCACAATTTGATTGTAGCtgtataacattttttga
taaAGATAAATTATATGAAGGtttattgataaaatatttaatatttttaa
tgatttaGTTTAGTTGATTTTATATCACAATTTGGAGACCAATGTTAATT
AATTAACTTAATTACATACAATCAAGCTTAATTGACATGCCCCATATTTT
ATTATtatgatcaaaatattttaatttcaacATGAATGATTttatacatt
tatttttttattttaaggaattttgagaaaagtagtttttgtttacttGG
TTCAGCTATTTGAAACAAGTTTATTTTTGGCATTTATTAAAGAAACACTA
ATATAgattttattgttaaaaatcaC
Run BLAST on NCBI

protein sequence of TCONS_00047662-protein

>TCONS_00047662-protein ID=TCONS_00047662-protein|Name=TCONS_00047662-protein|organism=Clytia hemisphaerica|type=polypeptide|length=320bp
MSKEVSFFEVVVKNTSPLQLESLRKRILFVVIFCNIVFLTTDIVSSFYGL
HASGKQTYTIIRVVVDYLMFMFAALVLCYCIIKLTKLQTAKLTLDGQGVS
YCQAVTTCTIIALLYISRAFYNILAVSPIHLPTFGYGWINVSDQGEEGQD
GYVKETTEDYAFISFGCVLFVWELLPTFTIVWFFRVRQPEGRLTSSGSKS
DSYHAKIYFFDNPNRYDSDDDMAVPYTPPSHTGLLGAHSFGARGSSPQNS
YPNRKIVSSYGSVPPYTGSYNQSVESTQSPLIRGTTPPLLFPRTSLGHTQ
QSPTSILRHHHTKDTQSPVP
Run BLAST on NCBI

transcript from alignment at scaffold_133:136701..144724-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00047662 ID=TCONS_00047662|Name=TCONS_00047662|organism=Clytia hemisphaerica|type=transcript|length=8024bp|location=Sequence derived from alignment at scaffold_133:136701..144724- (Clytia hemisphaerica)
CTTTGGATTTTAGAACCCCCGGATAAAAAATTTTGCCGTGCCGCGAACAA
GAAGTTTGAAAAAACTCACCCGCGAGTACTCATTTTCAAATTTTGAAGGA
AAATAAAGACATGATGTGCTGATTTTTTCTGTAAAAGAAAGCTGAATAAA
TTCTCTACACTTTGGAAAAAATACTTATGTCAAAAGAGGTTTCCTTCTTT
GAGGTATGTAAGCTTGAATATTTTTTTTCGAAAATCTATGTTTTGTTACT
GCCGCACTCGTAAGGCCCGACCTCCCTACCACAAGGAAAATCTTTATAAA
AACAAAAACTTTGACAAAATAAAAAATAATTTCTTAGTAAAAAATACCAT
CAGTTGGTCTAATGTCAACATCCCTTGTTTAATACCCCTTTTGTCAGACA
CAATACACCATTTCAACTACAGTTATAATTAGCTAGCTTAGCAGCAAAAC
ATTACATAATGACTCCATAAATTTTCACCACTAATCAGACGTTACTTATC
AATAAAATCGCAGATAAAATCGATTATCGATTAAAATCGATAGCTAATCG
ATAATTAATTGATTGAATATACCAATTAAAAACAATAAGGGGTCACCCAC
ATATCGATGTTTCCTGCAACTAACTTCATTGTGACACGAGGGGTGGGGGG
GTCAGAGCCTATGACGCTAAGAAATTTCAACAGAATATCGATTTTCAAAC
TTGTAACATTTTGTATTCCATCCTTCGCTACACCTTAATTCAAACGCATA
AAATATAACAGAGATGATATCCAATACCCTTCCGTTACGTTTGTAGGAAT
ATGTTATTATCTCCCTAATCATAAAAACAGAGATACCNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTGATATACAAGGGCCGCGCT
GACGGACCGTCTACATAAATATGACAAAACAACGAGCCGTTTGTCTGGGG
ACAAACAAATGTGAAAGTCATAAGTCAAAATCACTTGTTTTAAAACCGTG
CGAAACGAAGCACAAAAATCAATGTGGCTGGAATATCAATATCTGTAATA
GAGAAGGAAAATTACTTTCATCAATTTTTGGTATATTTATGTAAATGACG
CTAAGAAAGGGGGGTGGGGGGTTCTTCAGATAGCGTCACAATGACGTTAG
TTGCGCAGGAAAAATCGATATGTGAGTGACCCCTAATCGATAAATAATTA
ACGCCTAAAAAATTGTGAGTATTGATTATATCGATCATATAAGATATCTA
TTATATCAATAAGATAGTTTCATCAATATTATCGATTAAAAATCGATAGG
GATGAGGTATTGATTATATTGATATTAATAATNAATATCTATTATATCAA
TAAGATAGTTTCATCAATATTATCGATTAAACATCGATAGGGATGAGGTA
TTGATTATATTGATATTAATAATCAATATCAATTATTAACACTGTAATTG
ATATTATCGATTAAAAATCTATGGTGATAATTTAATTGAGTGCTAAAAAT
TGATTAATTATCGATTAGCTATCAATTTTATTGATTAGTAACACCTGGTA
CTAATTATAAACTTTCCCGGCAAAAGGTCTAGCAAAAGGTCTTCCTTCCT
TCCATCACCCTTTTTTCCATCATCATCACTTTTTTAGAGATAGGAATAAA
AAGAAGGTCCTAATAATCAAGGACTGAAAAAAGATGTTGAAAGCTGAGAA
ATAAAGTTTCAACCGGTTGGCAAACGGTATCATACTCCAGGATGCAAGTG
AAATTTTTCAATCTGCGGACCTAGACGGGGGTTAGGTTATTATCAGTAAG
GGTTAGGGTCGGAGCTCGAAAGTCACAATATATTATATAGGGGCATTCCT
TCCCTGAAACTTAACTTAGGATCCTGTAGAGATCGTGGGGGCACTGATAG
GGTTGGGAGCCTTGTTAAGGTCTATAAATTACATGCTATAAGTATTTGTG
AATGACAGCATTCTGTTGTGTCTCGTTGATGCAATCTGTTAGGCATTATT
GGGTTTGTAAACCAAGGGCTTGCATTTAGTGGTTAGACCCAAGGTAGGGG
GCCTATTTCACCAGTAAGGGCAAATTTCAGAAAAATACTTAAAAGCAGTT
AGAAACACTTGAGAAAGTCAGAAAATCAGGAAAGTAGAAANAAAGGGGGT
GGTGGTACCTAAGACAATTTTTCTTAAAAATCAGGTTAGTACCCTATGGG
TTAGTACCCTGCGGCTGTACCCCCCCTGGTCTGGGGACAAACAAATGTGA
AAGTCATAAGTCAAAATCACTTGTTTTAAAACCGTGCAAAACGAAGCACA
AAAATCAATGTGGCTGGAATATCAATATCTGTAATAGAGAAGGAAAATTA
CTTTCATCAATTTTTGGTATATTTATGTAAATGACGCTAAGAAAGGGGGG
TGGGGGGTTCTTCAGATAGCGTCACAATGACGTTAGTNTATTTATGTAAA
TGACGCTAAGAAAGGGGGGTGGGGGGTTCTTCAGATAGCGTCACAATGAC
GTTAGTTGCGCAGGAAAAATCGATATGTGAGTGACCCCTAATCGATAAAT
AATTAACGCCTAAAAAATTGTGAGTATTGATTATATCGATCATATAAGAT
ATCTATTATATCAATAAGATAGTTTCATCAATATTATCGATTAAAAATCG
ATAGGGATGAGGTATTGATTATATTGATATTAATAATCAATATCAATTAT
TAACACTGTAATCGATATTATCGATTAAAAATCTATGGTGATAATTTAAT
TGAGTGCTAAAAATTGATTAATTATCGATTAGCTATCAATTTTATTGATT
AGTAACATCTGGTACTAATTATAAACTTTCCCGGCAAAAGGTCTAGCAAA
AGGTCTTCCTTCCTTCCATCACCCTTTTTTCCATCATCATCACTTTTTTA
GAGATAGGAATAAAAAGAAGGTCCTAATAATCAAGGACTGAAAAAAGATG
TTGAAAGCTGAGAAATAAAGTTTCAACCGGTTGGCAAACGATATCATACT
CCAGGATGCAAGTGAAATTTTTCAATCTGCAGACCTAGACGGGGGTTAGG
TTATTATCAGTAAGGGTTAGGGTCGGAGCTCGAAAGTCACAATATATTAT
ATAGGGGCATTCCTTCCCTGAAACTTAACTTAGGATCCTGTAGAGATCGT
GGGGGCACTGATAGGGTTGGGAGCCTTGTTAAGGTCTATAAATTACATGC
TATAAGTATTTGTGAATGACAGCATTTTGTTGTGTCTCGTTGATGCAATC
TGTTAGGCATTATTGGGTTTGTAAACCAAGGTAGGAGGCCTATTTCACCA
GTAAGGGCAAATTTCAGAAAAATACTTAAAAGCAGTTAGAAACACTTGAG
AAAGTCAGAAAATCAGGAAAGTAGAAAATAGGGGGAAAATAAGCGGCAAT
GCATCCTGGAGTATGATATCGTTTGCCAACTGTTTCAATTAGTAATTTGG
GCCTTCCTTTATTCCCATCTCTAAAGATGGGTGGCCTAATGAGGGATGTT
AAAACATCAAACCAACTTAACGCTAATTGTTAGTAAAAAAAGAAGTCTGA
AAAATTTTATTCGTGCAAAACTTTTTCATAAATGTTTTTAGATTAGCCTT
ATCCACTGTAGTAAATTGGTCTACAGCCATTTTTTATGGCTATTAGCTTC
AGGTTATAGGACACTGCCTTCTTAAAATCACTAAAAGAATTGTAAAAACA
CTAGAACGTATGATGCCTTTCCTACAGTGGGAAACCTATAAACAACACTT
AGTTCCCCATGAAGTTAGGGACCATTTACAGGCCTCTAAAAAAATGGTAT
TGAGGTCCTGTAGAAAGGTGTTGAGGGACTTAAAGGTATTTAAATTTATT
CACAGGTTGTGGTCAAAAATACATCACCACTACAACTAGAGAGTTTGAGG
TTTGTTTATTAATCTTATTACTTCTGGTTTTTTTTAATTGTATAATAATT
TTTGAACGCATATTTACACATGTAAAGAAATAGAGGATTGTCAAGTCATG
GTGCTATGCAGATTTCAACTTTTTTCCAAGAGGTGAAAAGAACATGCAAG
TGCAAGTGTCTTTTAGTGATATTAAGAGCTAGGAAGGGTCTTTGCTCCAA
ATCCTGAATGTATTTAAAGTTACAGTATTCAAAATTACTCTAGACCTTTG
ATTTGTGAATATGATATATATTTAAATACGCTAGATCAGGCTAGATCAGC
AGCTTTATACTTCAAAATCTTCAATGCTAATAGTATAAAGTAACTTAACT
TTCATAAATCATAAATTAAAACTTTTCTCATATCTAGGAAACGTATATTG
TTTGTTGTCATATTTTGCAACATTGTGTTCTTAACAACTGATATTGTCAG
TTCATTCTATGGTCTGCATGCTTCTGGGAAGCAAACTTATACCATTATTC
GTGTTGTGGTTGATTATCTCATGTTTATGTTTGCAGCACTAGTTCTATGT
TATTGCATAATCAAGGTATTTATAAATGATTCAAATTTTATAATTTATTC
ATTTTTTTGCTGGTACAGTCATTTTGGATTACTTTCCATAAAGTGTAGCC
TTACTTTCATAACATTTTCAACATTTTTTACTTCTTGTTTTATCTACATG
TCAGAAATTTACAACATTATTTATTTGCCTTCCATTCTTCCTTCCAAGCT
AGCATACTATAGCTTTTAGATAAGAACAGTGCTATTTGGACGCTCTGAAA
GTTACCTTTTGCTTATGATAATACTACTCCAATTTTGTTAAAAATAAACT
TGAAATTTACAAAGAATTAAAAAGAGTAAGCAAGTAACGTTTCAATATTT
TTTTGTTTAATTATAAGGTTAAGCTATGGGCTTATATAGTTCAATTAGAA
ATGTGACCCTGTTCTTATTTATTTTAGTTAACTAAGCTGCAAACAGCCAA
GCTGACCTTGGATGGACAGGTTTGAGATTAACTTCAACTTTGTAGAATTT
TTCCGATATTTAGCTTTCAATTCCCTGCCGTGAAGTGATTGTCTATAAAC
ATGTTCCTTTTTCGAAAGAACCCTTCCAATTTATTGAATGTTTAGCTCCA
AATTACTTTTCTGGTAGAAGTAAATCCTGCAATTGTTCTCTTTTGAACTC
AGGGTGTTTCCTACTGTCAAGCAGTCACAACATGTACTATCATTGCCCTG
CTATACATCAGCAGAGCATTTTACAACATCTTAGCTGTTTCACCCATACA
TCTTCCAACTTTTGGTTATGGTTGGATAAATGTCTCAGACCAGGTATCAT
TGTGATGATCTTTTCATTGTGATATTTTTATGAAATAAAAATACTCTAAA
AAATATATATATAACGTGAACTTTTTAAGAATCTGTTATGATTTGTGATG
CTGAAATTATGTATTGCTTTATCTATGAAGACTCTGGTGCTCTGTAAAAT
TTTCACCAGGTCTTATTTTAATATCAGCTTTAAAATACATTCAAGATTTT
TCGCTTAGACCCATCAGAGTTTGTTTTCTTTCTTAGGGGGAAGAAGGACA
AGATGGCTATGTGAAGGAAACTACAGAGGATTATGCATTTATTTCTTTTG
GATGTGTGTTATTTGTCTGGGAGCTTCTCCCAACATTTACTATCGTTTGG
TTTTTCAGGGTCAGACAGCCTGAAGGCAGACTGGTAAAAATATGGATTTT
GTTCTTATTACATTGATTTTATATACCAAATAATAGTAATATATTACTTG
ACTTTTAGAAGATTGATTTTCTGCAATAACAAATTACAGTCATATTAAAT
ATGACCAGAAAAACAGTAGAAAATAAATATGTAGCATAATAAAAGTTTTT
TGGCTTTTTCTAAAAATGTGAAAAATGGCCTTAGACCTTTTTAAACCTCA
CCTCTTTTGGACTTAGGCCATTTTAAAATTAATTGGCTATGAGAACTTAG
GCCTTTTTAAAATTAAGGTTGTGATTTGATACAACAGGGGGGTCAGGGCC
CAGGATACCAACCCAGGGCCCAAAAACCTGACTTTTCGAGATTTGAAAGT
AGTAGACACCACCACCCCCTCATTTTGGTATCGATACCAACTTGACTTTT
TGAAATTTGAATAAAAAAAATTGACACCACCCCCCGGCCCTGGGTTTGGT
ATCTGGATCCTGACCCCCCCTGGATACAATACTTTAGTCTCCTTTCTGTA
TTTGACTCTTATTTTCTCATCCAATAGACTTCAAGTGGGTCAAAATCGGA
TAGTTATCATGCAAAGATTTATTTCTTTGACAATCCTAATCGTTATGATT
CAGATGATGATATGGCTGTGCCTTACACACCACCTTCACACACTGGGTAT
GTCACAACCTTAATTTGACAATCTTACAACCCTTCAACCAAAAGCTATAA
TATAATCGGGCAGTTAAAAAGGGTTTTTAAAATGTGCAAAAGAAGCAATG
TCATTGAATGACTAAAGAAAAAGGCATTTGTTTTAGCCTGTTGAAGTTTT
GTCTTGCCCTTGCAGTGTGTCTATAGGTTACCTTATTACACTGATGATAA
AAGTTTAGTTTAAATACATTTGTCATATCAATTTAGCACTAATGATGGCA
TAAGACCAAAAAGAGTTTTTCAAGTTCAAAAAAGTAATAACATGACTAGT
TGAAATTGTAATAAGGTATCAATTTGCCTTCTTTTTACATTTATACTAAG
TGAATGAAATATAAAAGAATAAACTCAAAGGTTATTTCTCCATTATAATA
AAAGTGCTCAAATGAGTCAGCGTTGTTTTTGTCTAAAATTTGTTATCAAA
GTTTAATAAATTTACATTTTAGGCTTCTCGGTGCGCACTCATTTGGGGCT
CGTGGAAGTTCACCTCAAAACTCTTATCCAAACCGGAAAATTGTTTCCTC
ATATGGGTCAGTGCCACCATACACAGGAAGTTATAACCAATCTGTTGAAA
GTACGCAAAGTCCACTTATCCGTGGAACAACACCACCTCTTCTTTTTCCA
AGGACATCTCTTGGGCACACGCAACAATCACCAACTTCAATACTCAGACA
TCATCATACCAAAGACACTCAATCACCAGTACCTTAACTTTTTTTAGTAT
TTCTTCGAAGTTCTCGAAAGGGAAGAAACTTTTTGCTAAACAACACTCAA
TAATGAAACATCAATAAAACTTAAGTATTAATTCACGTCCAGGAATGAAC
TTTACTCTATTCTCCTATGTGTAATTGATGAGTACTTTGCTGATGCAAAA
AAGTCCAAACTATGAAATTAATCTTAAGTTTTCTTTTTACAACCTTCGGA
TTTTACAATTTGTAATTCCAAGAAAATTTCTGAACTTCCTTCTATTGTTA
TAGTTCTTTCCCTCATAACTCCTTCCCTTATGTATTTCATATTTAATAAC
ACTTCACACTTCAATTTAAGTTATTTTGGAAAAATTTATAAATTATATTA
TTATAAAAAATAGATCTAAAAAGCTTGATTCCTTAGAAAACTTTAGTAAT
GCTTTGCCTTAAATTTCATATTTTTGGCATATCTTGTTTAAAAAAATACT
CTTCTTTATTGACGAAATAAGTATTATATTAGAGCTTAGATTATATCATA
GTAGTGATTCAGTTCACAATTTGATTGTAGCTGTATAACATTTTTTGATA
AAGATAAATTATATGAAGGTTTATTGATAAAATATTTAATATTTTTAATG
ATTTAGTTTAGTTGATTTTATATCACAATTTGGAGACCAATGTTAATTAA
TTAACTTAATTACATACAATCAAGCTTAATTGACATGCCCCATATTTTAT
TATTATGATCAAAATATTTTAATTTCAACATGAATGATTTTATACATTTA
TTTTTTTATTTTAAGGAATTTTGAGAAAAGTAGTTTTTGTTTACTTGGTT
CAGCTATTTGAAACAAGTTTATTTTTGGCATTTATTAAAGAAACACTAAT
ATAGATTTTATTGTTAAAAATCAC

Coding sequence (CDS) from alignment at scaffold_133:136701..144724-

>TCONS_00047662 ID=TCONS_00047662|Name=TCONS_00047662|organism=Clytia hemisphaerica|type=CDS|length=7704bp|location=Sequence derived from alignment at scaffold_133:136701..144724- (Clytia hemisphaerica)
GCTTCTCGGTGCGCACTCATTTGGGGCTCGTGGAAGTTCACCTCAAAACT
CTTATCCAAACCGGAAAATTGTTTCCTCATATGGGTCAGTGCCACCATAC
ACAGGAAGTTATAACCAATCTGTTGAAAGTACGCAAAGTCCACTTATCCG
TGGAACAACACCACCTCTTCTTTTTCCAAGGACATCTCTTGGGCACACGC
AACAATCACCAACTTCAATACTCAGACATCATCATACCAAAGACACTCAA
TCACCAGTACCTTAAACTTCAAGTGGGTCAAAATCGGATAGTTATCATGC
AAAGATTTATTTCTTTGACAATCCTAATCGTTATGATTCAGATGATGATA
TGGCTGTGCCTTACACACCACCTTCACACACTGGGGGGAAGAAGGACAAG
ATGGCTATGTGAAGGAAACTACAGAGGATTATGCATTTATTTCTTTTGGA
TGTGTGTTATTTGTCTGGGAGCTTCTCCCAACATTTACTATCGTTTGGTT
TTTCAGGGTCAGACAGCCTGAAGGCAGACTGGGTGTTTCCTACTGTCAAG
CAGTCACAACATGTACTATCATTGCCCTGCTATACATCAGCAGAGCATTT
TACAACATCTTAGCTGTTTCACCCATACATCTTCCAACTTTTGGTTATGG
TTGGATAAATGTCTCAGACCAGTTAACTAAGCTGCAAACAGCCAAGCTGA
CCTTGGATGGACAGGAAACGTATATTGTTTGTTGTCATATTTTGCAACAT
TGTGTTCTTAACAACTGATATTGTCAGTTCATTCTATGGTCTGCATGCTT
CTGGGAAGCAAACTTATACCATTATTCGTGTTGTGGTTGATTATCTCATG
TTTATGTTTGCAGCACTAGTTCTATGTTATTGCATAATCAAGGTTGTGGT
CAAAAATACATCACCACTACAACTAGAGAGTTTGAGATGTCAAAAGAGGT
TTCCTTCTTTGAGGCTTCTCGGTGCGCACTCATTTGGGGCTCGTGGAAGT
TCACCTCAAAACTCTTATCCAAACCGGAAAATTGTTTCCTCATATGGGTC
AGTGCCACCATACACAGGAAGTTATAACCAATCTGTTGAAAGTACGCAAA
GTCCACTTATCCGTGGAACAACACCACCTCTTCTTTTTCCAAGGACATCT
CTTGGGCACACGCAACAATCACCAACTTCAATACTCAGACATCATCATAC
CAAAGACACTCAATCACCAGTACCTTAAACTTCAAGTGGGTCAAAATCGG
ATAGTTATCATGCAAAGATTTATTTCTTTGACAATCCTAATCGTTATGAT
TCAGATGATGATATGGCTGTGCCTTACACACCACCTTCACACACTGGGGG
GAAGAAGGACAAGATGGCTATGTGAAGGAAACTACAGAGGATTATGCATT
TATTTCTTTTGGATGTGTGTTATTTGTCTGGGAGCTTCTCCCAACATTTA
CTATCGTTTGGTTTTTCAGGGTCAGACAGCCTGAAGGCAGACTGGGTGTT
TCCTACTGTCAAGCAGTCACAACATGTACTATCATTGCCCTGCTATACAT
CAGCAGAGCATTTTACAACATCTTAGCTGTTTCACCCATACATCTTCCAA
CTTTTGGTTATGGTTGGATAAATGTCTCAGACCAGTTAACTAAGCTGCAA
ACAGCCAAGCTGACCTTGGATGGACAGGAAACGTATATTGTTTGTTGTCA
TATTTTGCAACATTGTGTTCTTAACAACTGATATTGTCAGTTCATTCTAT
GGTCTGCATGCTTCTGGGAAGCAAACTTATACCATTATTCGTGTTGTGGT
TGATTATCTCATGTTTATGTTTGCAGCACTAGTTCTATGTTATTGCATAA
TCAAGGTTGTGGTCAAAAATACATCACCACTACAACTAGAGAGTTTGAGA
TGTCAAAAGAGGTTTCCTTCTTTGAGGCTTCTCGGTGCGCACTCATTTGG
GGCTCGTGGAAGTTCACCTCAAAACTCTTATCCAAACCGGAAAATTGTTT
CCTCATATGGGTCAGTGCCACCATACACAGGAAGTTATAACCAATCTGTT
GAAAGTACGCAAAGTCCACTTATCCGTGGAACAACACCACCTCTTCTTTT
TCCAAGGACATCTCTTGGGCACACGCAACAATCACCAACTTCAATACTCA
GACATCATCATACCAAAGACACTCAATCACCAGTACCTTAAACTTCAAGT
GGGTCAAAATCGGATAGTTATCATGCAAAGATTTATTTCTTTGACAATCC
TAATCGTTATGATTCAGATGATGATATGGCTGTGCCTTACACACCACCTT
CACACACTGGGGGGAAGAAGGACAAGATGGCTATGTGAAGGAAACTACAG
AGGATTATGCATTTATTTCTTTTGGATGTGTGTTATTTGTCTGGGAGCTT
CTCCCAACATTTACTATCGTTTGGTTTTTCAGGGTCAGACAGCCTGAAGG
CAGACTGGGTGTTTCCTACTGTCAAGCAGTCACAACATGTACTATCATTG
CCCTGCTATACATCAGCAGAGCATTTTACAACATCTTAGCTGTTTCACCC
ATACATCTTCCAACTTTTGGTTATGGTTGGATAAATGTCTCAGACCAGTT
AACTAAGCTGCAAACAGCCAAGCTGACCTTGGATGGACAGGAAACGTATA
TTGTTTGTTGTCATATTTTGCAACATTGTGTTCTTAACAACTGATATTGT
CAGTTCATTCTATGGTCTGCATGCTTCTGGGAAGCAAACTTATACCATTA
TTCGTGTTGTGGTTGATTATCTCATGTTTATGTTTGCAGCACTAGTTCTA
TGTTATTGCATAATCAAGGTTGTGGTCAAAAATACATCACCACTACAACT
AGAGAGTTTGAGATGTCAAAAGAGGTTTCCTTCTTTGAGGCTTCTCGGTG
CGCACTCATTTGGGGCTCGTGGAAGTTCACCTCAAAACTCTTATCCAAAC
CGGAAAATTGTTTCCTCATATGGGTCAGTGCCACCATACACAGGAAGTTA
TAACCAATCTGTTGAAAGTACGCAAAGTCCACTTATCCGTGGAACAACAC
CACCTCTTCTTTTTCCAAGGACATCTCTTGGGCACACGCAACAATCACCA
ACTTCAATACTCAGACATCATCATACCAAAGACACTCAATCACCAGTACC
TTAAACTTCAAGTGGGTCAAAATCGGATAGTTATCATGCAAAGATTTATT
TCTTTGACAATCCTAATCGTTATGATTCAGATGATGATATGGCTGTGCCT
TACACACCACCTTCACACACTGGGGGGAAGAAGGACAAGATGGCTATGTG
AAGGAAACTACAGAGGATTATGCATTTATTTCTTTTGGATGTGTGTTATT
TGTCTGGGAGCTTCTCCCAACATTTACTATCGTTTGGTTTTTCAGGGTCA
GACAGCCTGAAGGCAGACTGGGTGTTTCCTACTGTCAAGCAGTCACAACA
TGTACTATCATTGCCCTGCTATACATCAGCAGAGCATTTTACAACATCTT
AGCTGTTTCACCCATACATCTTCCAACTTTTGGTTATGGTTGGATAAATG
TCTCAGACCAGTTAACTAAGCTGCAAACAGCCAAGCTGACCTTGGATGGA
CAGGAAACGTATATTGTTTGTTGTCATATTTTGCAACATTGTGTTCTTAA
CAACTGATATTGTCAGTTCATTCTATGGTCTGCATGCTTCTGGGAAGCAA
ACTTATACCATTATTCGTGTTGTGGTTGATTATCTCATGTTTATGTTTGC
AGCACTAGTTCTATGTTATTGCATAATCAAGGTTGTGGTCAAAAATACAT
CACCACTACAACTAGAGAGTTTGAGATGTCAAAAGAGGTTTCCTTCTTTG
AGGCTTCTCGGTGCGCACTCATTTGGGGCTCGTGGAAGTTCACCTCAAAA
CTCTTATCCAAACCGGAAAATTGTTTCCTCATATGGGTCAGTGCCACCAT
ACACAGGAAGTTATAACCAATCTGTTGAAAGTACGCAAAGTCCACTTATC
CGTGGAACAACACCACCTCTTCTTTTTCCAAGGACATCTCTTGGGCACAC
GCAACAATCACCAACTTCAATACTCAGACATCATCATACCAAAGACACTC
AATCACCAGTACCTTAAACTTCAAGTGGGTCAAAATCGGATAGTTATCAT
GCAAAGATTTATTTCTTTGACAATCCTAATCGTTATGATTCAGATGATGA
TATGGCTGTGCCTTACACACCACCTTCACACACTGGGGGGAAGAAGGACA
AGATGGCTATGTGAAGGAAACTACAGAGGATTATGCATTTATTTCTTTTG
GATGTGTGTTATTTGTCTGGGAGCTTCTCCCAACATTTACTATCGTTTGG
TTTTTCAGGGTCAGACAGCCTGAAGGCAGACTGGGTGTTTCCTACTGTCA
AGCAGTCACAACATGTACTATCATTGCCCTGCTATACATCAGCAGAGCAT
TTTACAACATCTTAGCTGTTTCACCCATACATCTTCCAACTTTTGGTTAT
GGTTGGATAAATGTCTCAGACCAGTTAACTAAGCTGCAAACAGCCAAGCT
GACCTTGGATGGACAGGAAACGTATATTGTTTGTTGTCATATTTTGCAAC
ATTGTGTTCTTAACAACTGATATTGTCAGTTCATTCTATGGTCTGCATGC
TTCTGGGAAGCAAACTTATACCATTATTCGTGTTGTGGTTGATTATCTCA
TGTTTATGTTTGCAGCACTAGTTCTATGTTATTGCATAATCAAGGTTGTG
GTCAAAAATACATCACCACTACAACTAGAGAGTTTGAGATGTCAAAAGAG
GTTTCCTTCTTTGAGGCTTCTCGGTGCGCACTCATTTGGGGCTCGTGGAA
GTTCACCTCAAAACTCTTATCCAAACCGGAAAATTGTTTCCTCATATGGG
TCAGTGCCACCATACACAGGAAGTTATAACCAATCTGTTGAAAGTACGCA
AAGTCCACTTATCCGTGGAACAACACCACCTCTTCTTTTTCCAAGGACAT
CTCTTGGGCACACGCAACAATCACCAACTTCAATACTCAGACATCATCAT
ACCAAAGACACTCAATCACCAGTACCTTAAACTTCAAGTGGGTCAAAATC
GGATAGTTATCATGCAAAGATTTATTTCTTTGACAATCCTAATCGTTATG
ATTCAGATGATGATATGGCTGTGCCTTACACACCACCTTCACACACTGGG
GGGAAGAAGGACAAGATGGCTATGTGAAGGAAACTACAGAGGATTATGCA
TTTATTTCTTTTGGATGTGTGTTATTTGTCTGGGAGCTTCTCCCAACATT
TACTATCGTTTGGTTTTTCAGGGTCAGACAGCCTGAAGGCAGACTGGGTG
TTTCCTACTGTCAAGCAGTCACAACATGTACTATCATTGCCCTGCTATAC
ATCAGCAGAGCATTTTACAACATCTTAGCTGTTTCACCCATACATCTTCC
AACTTTTGGTTATGGTTGGATAAATGTCTCAGACCAGTTAACTAAGCTGC
AAACAGCCAAGCTGACCTTGGATGGACAGGAAACGTATATTGTTTGTTGT
CATATTTTGCAACATTGTGTTCTTAACAACTGATATTGTCAGTTCATTCT
ATGGTCTGCATGCTTCTGGGAAGCAAACTTATACCATTATTCGTGTTGTG
GTTGATTATCTCATGTTTATGTTTGCAGCACTAGTTCTATGTTATTGCAT
AATCAAGGTTGTGGTCAAAAATACATCACCACTACAACTAGAGAGTTTGA
GATGTCAAAAGAGGTTTCCTTCTTTGAGGCTTCTCGGTGCGCACTCATTT
GGGGCTCGTGGAAGTTCACCTCAAAACTCTTATCCAAACCGGAAAATTGT
TTCCTCATATGGGTCAGTGCCACCATACACAGGAAGTTATAACCAATCTG
TTGAAAGTACGCAAAGTCCACTTATCCGTGGAACAACACCACCTCTTCTT
TTTCCAAGGACATCTCTTGGGCACACGCAACAATCACCAACTTCAATACT
CAGACATCATCATACCAAAGACACTCAATCACCAGTACCTTAAACTTCAA
GTGGGTCAAAATCGGATAGTTATCATGCAAAGATTTATTTCTTTGACAAT
CCTAATCGTTATGATTCAGATGATGATATGGCTGTGCCTTACACACCACC
TTCACACACTGGGGGGAAGAAGGACAAGATGGCTATGTGAAGGAAACTAC
AGAGGATTATGCATTTATTTCTTTTGGATGTGTGTTATTTGTCTGGGAGC
TTCTCCCAACATTTACTATCGTTTGGTTTTTCAGGGTCAGACAGCCTGAA
GGCAGACTGGGTGTTTCCTACTGTCAAGCAGTCACAACATGTACTATCAT
TGCCCTGCTATACATCAGCAGAGCATTTTACAACATCTTAGCTGTTTCAC
CCATACATCTTCCAACTTTTGGTTATGGTTGGATAAATGTCTCAGACCAG
TTAACTAAGCTGCAAACAGCCAAGCTGACCTTGGATGGACAGGAAACGTA
TATTGTTTGTTGTCATATTTTGCAACATTGTGTTCTTAACAACTGATATT
GTCAGTTCATTCTATGGTCTGCATGCTTCTGGGAAGCAAACTTATACCAT
TATTCGTGTTGTGGTTGATTATCTCATGTTTATGTTTGCAGCACTAGTTC
TATGTTATTGCATAATCAAGGTTGTGGTCAAAAATACATCACCACTACAA
CTAGAGAGTTTGAGATGTCAAAAGAGGTTTCCTTCTTTGAGGCTTCTCGG
TGCGCACTCATTTGGGGCTCGTGGAAGTTCACCTCAAAACTCTTATCCAA
ACCGGAAAATTGTTTCCTCATATGGGTCAGTGCCACCATACACAGGAAGT
TATAACCAATCTGTTGAAAGTACGCAAAGTCCACTTATCCGTGGAACAAC
ACCACCTCTTCTTTTTCCAAGGACATCTCTTGGGCACACGCAACAATCAC
CAACTTCAATACTCAGACATCATCATACCAAAGACACTCAATCACCAGTA
CCTTAAACTTCAAGTGGGTCAAAATCGGATAGTTATCATGCAAAGATTTA
TTTCTTTGACAATCCTAATCGTTATGATTCAGATGATGATATGGCTGTGC
CTTACACACCACCTTCACACACTGGGGGGAAGAAGGACAAGATGGCTATG
TGAAGGAAACTACAGAGGATTATGCATTTATTTCTTTTGGATGTGTGTTA
TTTGTCTGGGAGCTTCTCCCAACATTTACTATCGTTTGGTTTTTCAGGGT
CAGACAGCCTGAAGGCAGACTGGGTGTTTCCTACTGTCAAGCAGTCACAA
CATGTACTATCATTGCCCTGCTATACATCAGCAGAGCATTTTACAACATC
TTAGCTGTTTCACCCATACATCTTCCAACTTTTGGTTATGGTTGGATAAA
TGTCTCAGACCAGTTAACTAAGCTGCAAACAGCCAAGCTGACCTTGGATG
GACAGGAAACGTATATTGTTTGTTGTCATATTTTGCAACATTGTGTTCTT
AACAACTGATATTGTCAGTTCATTCTATGGTCTGCATGCTTCTGGGAAGC
AAACTTATACCATTATTCGTGTTGTGGTTGATTATCTCATGTTTATGTTT
GCAGCACTAGTTCTATGTTATTGCATAATCAAGGTTGTGGTCAAAAATAC
ATCACCACTACAACTAGAGAGTTTGAGATGTCAAAAGAGGTTTCCTTCTT
TGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_030351XLOC_030351Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00047662-exon-scaffold_133-1575043694:144522..144724TCONS_00047662-exon-scaffold_133-1575043694:144522..144724Clytia hemisphaericaexon
TCONS_00047662-exon-scaffold_133-1575043694:140726..140769TCONS_00047662-exon-scaffold_133-1575043694:140726..140769Clytia hemisphaericaexon
TCONS_00047662-exon-scaffold_133-1575043694:140160..140337TCONS_00047662-exon-scaffold_133-1575043694:140160..140337Clytia hemisphaericaexon
TCONS_00047662-exon-scaffold_133-1575043694:139706..139747TCONS_00047662-exon-scaffold_133-1575043694:139706..139747Clytia hemisphaericaexon
TCONS_00047662-exon-scaffold_133-1575043694:139382..139522TCONS_00047662-exon-scaffold_133-1575043694:139382..139522Clytia hemisphaericaexon
TCONS_00047662-exon-scaffold_133-1575043694:138992..139138TCONS_00047662-exon-scaffold_133-1575043694:138992..139138Clytia hemisphaericaexon
TCONS_00047662-exon-scaffold_133-1575043694:138329..138447TCONS_00047662-exon-scaffold_133-1575043694:138329..138447Clytia hemisphaericaexon
TCONS_00047662-exon-scaffold_133-1575043694:136701..137852TCONS_00047662-exon-scaffold_133-1575043694:136701..137852Clytia hemisphaericaexon
TCONS_00047662-exon-scaffold_133-1510915933:144522..144724TCONS_00047662-exon-scaffold_133-1510915933:144522..144724Clytia hemisphaericaexon
TCONS_00047662-exon-scaffold_133-1510915933:140726..140769TCONS_00047662-exon-scaffold_133-1510915933:140726..140769Clytia hemisphaericaexon
TCONS_00047662-exon-scaffold_133-1510915933:140160..140337TCONS_00047662-exon-scaffold_133-1510915933:140160..140337Clytia hemisphaericaexon
TCONS_00047662-exon-scaffold_133-1510915933:139706..139747TCONS_00047662-exon-scaffold_133-1510915933:139706..139747Clytia hemisphaericaexon
TCONS_00047662-exon-scaffold_133-1510915933:139382..139522TCONS_00047662-exon-scaffold_133-1510915933:139382..139522Clytia hemisphaericaexon
TCONS_00047662-exon-scaffold_133-1510915933:138992..139138TCONS_00047662-exon-scaffold_133-1510915933:138992..139138Clytia hemisphaericaexon
TCONS_00047662-exon-scaffold_133-1510915933:138329..138447TCONS_00047662-exon-scaffold_133-1510915933:138329..138447Clytia hemisphaericaexon
TCONS_00047662-exon-scaffold_133-1510915933:136701..137852TCONS_00047662-exon-scaffold_133-1510915933:136701..137852Clytia hemisphaericaexon
TCONS_00047662-exon-scaffold_133-1491911889:144522..144724TCONS_00047662-exon-scaffold_133-1491911889:144522..144724Clytia hemisphaericaexon
TCONS_00047662-exon-scaffold_133-1491911889:140726..140769TCONS_00047662-exon-scaffold_133-1491911889:140726..140769Clytia hemisphaericaexon
TCONS_00047662-exon-scaffold_133-1491911889:140160..140337TCONS_00047662-exon-scaffold_133-1491911889:140160..140337Clytia hemisphaericaexon
TCONS_00047662-exon-scaffold_133-1491911889:139706..139747TCONS_00047662-exon-scaffold_133-1491911889:139706..139747Clytia hemisphaericaexon
TCONS_00047662-exon-scaffold_133-1491911889:139382..139522TCONS_00047662-exon-scaffold_133-1491911889:139382..139522Clytia hemisphaericaexon
TCONS_00047662-exon-scaffold_133-1491911889:138992..139138TCONS_00047662-exon-scaffold_133-1491911889:138992..139138Clytia hemisphaericaexon
TCONS_00047662-exon-scaffold_133-1491911889:138329..138447TCONS_00047662-exon-scaffold_133-1491911889:138329..138447Clytia hemisphaericaexon
TCONS_00047662-exon-scaffold_133-1491911889:136701..137852TCONS_00047662-exon-scaffold_133-1491911889:136701..137852Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00047662-proteinTCONS_00047662-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_133supercontigscaffold_133:136701..144724 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
6.66026	6.31255	2.14979	1.04007	12.4298	9.12886	7.74017	7.79488	7.25429	8.33802	8.59296	6.05949	7.93234	6.58769	7.15461	7.21446	9.47804	6.24601	7.85155	7.89402	6.44544	6.01472	12.6367	14.4396	7.8557	9.48586	5.36528	3.15985	11.2	11.1443
Blast
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BLAST of TCONS_00047662 vs. Swiss-Prot (Human)
Match: G137B (Integral membrane protein GPR137B OS=Homo sapiens GN=GPR137B PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 2.850e-31
Identity = 85/236 (36.02%), Postives = 129/236 (54.66%), Query Frame = 3 
Query:  195 FFEVVVKNTSPLQLESLRKRI-LFVV-IFCNIVFLTTDIVSSFYGLHASGKQTYTI-IRVVVDYLMFMFAALVLCYCIIXXXXXXXXXXXXDGQGVSYCQAVTTCTIIALLYISRAFYNILAVS-----PIHLPTFGYGWINVSDQGEEGQDGYVKETTEDYAFISFGCVLFVWELLPTFTIVWFFRVRQPEGRLTSSGS-KSDSYHAKIYFFDNPNRYDSDDDMAVPYTPPSHTG 875
            F +V+ K  S    E L+ R+ L++  +F ++VFL  ++  +      + ++   + +RV ++  +F+  A+ L  C+ K++K+  A + L+ +G S CQ       + LLY SRA YN+  +S      +H  +F Y W NVSDQ +      +K    D  ++ FG VLFVWELLPT  +V+FFRVR P   LT+ G   S  +  + YFFDNP RYDSDDD+A    P    G
Sbjct:  136 FTQVIFKAKSKYSPELLKYRLPLYLASLFISLVFLLVNLTCAVLVKTGNWERKVIVSVRVAINDTLFVLCAVSLSICLYKISKMSLANIYLESKGSSVCQVTAIGVTVILLYTSRACYNLFILSFSQNKSVH--SFDYDWYNVSDQAD------LKNQLGDAGYVLFGVVLFVWELLPTTLVVYFFRVRNPTKDLTNPGMVPSHGFSPRSYFFDNPRRYDSDDDLAWNIAPQGLQG 363
The following BLAST results are available for this feature:
BLAST of TCONS_00047662 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
G137B2.850e-3136.02Integral membrane protein GPR137B OS=Homo sapiens ... [more]
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