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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00047728 ID=TCONS_00047728|Name=TCONS_00047728|organism=Clytia hemisphaerica|type=transcript|length=1565bp
tattaataagcatacatcaatgttcttaaaattactgaattttttgatga
gatatgtttcTTTGCTCACAAAGtgttgaatatgaaagaatatttcaaga
gcatgaaattttggtttctgaacgttttctttataagaaacaaacgacaa
attttaatagatcatcactatttgtgttctgaatgattgtttaatggtca
cgctcacgtagatatcaattatgtgttaaatgcataaccaggtaggtcca
taaaagtatcacttgtatTTTCATACAATCAATAATACATTGTAACTACC
AATTATTCTTCACAGTTCAACTAATCAAAAATGGAAGCACTTTCCATAAA
GCAGAATGAGGCAATAACACAGATTCAAGCTACATGGAAGGGTTATCGAA
cgagaaaatttattttacagaccagacaagaatttgaagaaattttaaat
gaaattgaaaCAGAACTTGGTGAAAAGGTTGAAGAGAAAATATCATGGCC
AAAACCTTGTTTATGTTTAccctattttgaaaaagaagacaatgCTGTTG
AGAATGCTACTTCTAATGAATGGAGCGGTACAAATAATTGTGATGATGAA
AAACTGGCACCTCCCATGAATGTTGAATCTGCTAGTATTGGTTTGGTGGA
AAATCTAACCAAAATTGTCCAGACAAAAAATGTCCAGGATGGTCAAGTTG
ATACTGTTTTAGAAGTTGAATCTTCAGATAAAGAAAACTCTTTCGATAAT
CAAAAGGAATCAATATCAATAGACATCCAACCACATTGTAGACAAGAACA
GCGTCTTCTTACTGAAAGCTGGCTAACTGATAAGTCGTTCGATTTACATT
CAACGTATATTGAACAGAATCCTGAGCAACCGCTGGACAAGGAAAGTTTG
AAAACCCAACAAATAGACTTAATGTTAGAACTAATTTGGATTCAACAGGC
AATACAGAGTCGAAAAGTTTATTTACGTTTGAAAGGCAAATCGTCCTCCA
GTTGATAAAAAATGGTCTTCTACAATCACCGCcataatatttggcacaaa
aggggaattgtcttaaaactttaaaactgcAAGTGATTTTCAAGTGCTTT
AAACTAAAGTACGGTTAGAAAGTTGAGTTTTAACTTTGGATTTTAaaatt
agacttaagactttagGGACCtaaggatctcaggatctaaaagctcaaca
attttccaatgttatggctgagaatatagcctggaagacACTTAACCCCT
CCCGAATCGAAAAAATCTTATGAAACAAAGTTGAAGTACTGAAATTGCAA
TCCTTGCCTgagctttaaattctaaaaaacgttaaaatgccaaaattgcc
aatatatttcggcactGATTGTAGTGATAAATTATCAAGTTATTTTTTCC
TAGCCCGATTACTTATGTATTGTTAAATATTTAGTATTTATTACATTTAC
ACCGATTGTACTATATATGTCTaaagtttttatatttaaaattagttttc
aaatGAGGTCTACACTTTATCTAATCACACATGATACTATAGCTACTATT
AGACGTGGTTTTTGA Run BLAST on NCBI transcript from alignment at scaffold_135:67570..69134- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00047728 ID=TCONS_00047728|Name=TCONS_00047728|organism=Clytia hemisphaerica|type=transcript|length=1565bp|location=Sequence derived from alignment at scaffold_135:67570..69134- (Clytia hemisphaerica)
TATTAATAAGCATACATCAATGTTCTTAAAATTACTGAATTTTTTGATGA
GATATGTTTCTTTGCTCACAAAGTGTTGAATATGAAAGAATATTTCAAGA
GCATGAAATTTTGGTTTCTGAACGTTTTCTTTATAAGAAACAAACGACAA
ATTTTAATAGATCATCACTATTTGTGTTCTGAATGATTGTTTAATGGTCA
CGCTCACGTAGATATCAATTATGTGTTAAATGCATAACCAGGTAGGTCCA
TAAAAGTATCACTTGTATTTTCATACAATCAATAATACATTGTAACTACC
AATTATTCTTCACAGTTCAACTAATCAAAAATGGAAGCACTTTCCATAAA
GCAGAATGAGGCAATAACACAGATTCAAGCTACATGGAAGGGTTATCGAA
CGAGAAAATTTATTTTACAGACCAGACAAGAATTTGAAGAAATTTTAAAT
GAAATTGAAACAGAACTTGGTGAAAAGGTTGAAGAGAAAATATCATGGCC
AAAACCTTGTTTATGTTTACCCTATTTTGAAAAAGAAGACAATGCTGTTG
AGAATGCTACTTCTAATGAATGGAGCGGTACAAATAATTGTGATGATGAA
AAACTGGCACCTCCCATGAATGTTGAATCTGCTAGTATTGGTTTGGTGGA
AAATCTAACCAAAATTGTCCAGACAAAAAATGTCCAGGATGGTCAAGTTG
ATACTGTTTTAGAAGTTGAATCTTCAGATAAAGAAAACTCTTTCGATAAT
CAAAAGGAATCAATATCAATAGACATCCAACCACATTGTAGACAAGAACA
GCGTCTTCTTACTGAAAGCTGGCTAACTGATAAGTCGTTCGATTTACATT
CAACGTATATTGAACAGAATCCTGAGCAACCGCTGGACAAGGAAAGTTTG
AAAACCCAACAAATAGACTTAATGTTAGAACTAATTTGGATTCAACAGGC
AATACAGAGTCGAAAAGTTTATTTACGTTTGAAAGGCAAATCGTCCTCCA
GTTGATAAAAAATGGTCTTCTACAATCACCGCCATAATATTTGGCACAAA
AGGGGAATTGTCTTAAAACTTTAAAACTGCAAGTGATTTTCAAGTGCTTT
AAACTAAAGTACGGTTAGAAAGTTGAGTTTTAACTTTGGATTTTAAAATT
AGACTTAAGACTTTAGGGACCTAAGGATCTCAGGATCTAAAAGCTCAACA
ATTTTCCAATGTTATGGCTGAGAATATAGCCTGGAAGACACTTAACCCCT
CCCGAATCGAAAAAATCTTATGAAACAAAGTTGAAGTACTGAAATTGCAA
TCCTTGCCTGAGCTTTAAATTCTAAAAAACGTTAAAATGCCAAAATTGCC
AATATATTTCGGCACTGATTGTAGTGATAAATTATCAAGTTATTTTTTCC
TAGCCCGATTACTTATGTATTGTTAAATATTTAGTATTTATTACATTTAC
ACCGATTGTACTATATATGTCTAAAGTTTTTATATTTAAAATTAGTTTTC
AAATGAGGTCTACACTTTATCTAATCACACATGATACTATAGCTACTATT
AGACGTGGTTTTTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00047728-exon-scaffold_135-1575043694:67570..69134 | TCONS_00047728-exon-scaffold_135-1575043694:67570..69134 | Clytia hemisphaerica | exon |
| TCONS_00047728-exon-scaffold_135-1510915933:67570..69134 | TCONS_00047728-exon-scaffold_135-1510915933:67570..69134 | Clytia hemisphaerica | exon |
| TCONS_00047728-exon-scaffold_135-1491911889:67570..69134 | TCONS_00047728-exon-scaffold_135-1491911889:67570..69134 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_135 | supercontig | scaffold_135:67570..69134 - |
Blast
The following BLAST results are available for this feature:
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