TCONS_00047816 (transcript) - C. hemisphaerica

Overview
NameTCONS_00047816
Unique NameTCONS_00047816
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length4316

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00047816 ID=TCONS_00047816|Name=TCONS_00047816|organism=Clytia hemisphaerica|type=transcript|length=4316bp
CTTTGCAAACGTTAGCTGAGGAAACTGCACAGACTGTCAAAGAAAAACAC
TTGAAATACTTTAAATACAGTAACATCTTAGTGCTCAAGTCTAACAAGTT
ATTTGGAGATCAGAACACAATCTTCTTAAGATTATCACGGAATATTGCGG
AACTCTATCATCGTCAATGTACTCAGGATCAATGATATATTGATTTTGTG
ATAAACTTAAAAGTTGAAACCAACGCTGCTCTGTCATGCTCTCGGACAGA
AAGAAGAGTTTTGATTTGGCTGAAATCCTCGGTGAATTAAACGAGGATGA
ACAAGAACCTGGGAAAATCGCTCAAAAACTCCTGGACACAGTTGTCCTCT
TTATCTTACAGGCTAAAGGACTAAAGAGCCAAGATGCGAGTACAGGCTAT
CATGAAATTATGAATGTTAGCGACTATCACATTTTGTACAATTTCTTCAA
AACTAGACTAGATATCGCACTCTATGAGCAAGAGAATCTAGAGTCGGTGT
CACGGATATTGTATGAACGAGCTAAAGATTTGATCTTGCATTCAGATGGT
GTTacaaacggacaaatgaaagcCCTGGGTCGCACCTTACTACACGAGGT
TATGGGTTACCATAGAGACCATTTCCATAGCGATGACAGTGAGCATGACT
GTGGGTGTTTGCTCGTTAAAATGTTAATCAGTTATAACGCTGACGTGAAC
GCGCAAGACAAATACGGGACGACGCCGTTTCACGAATCAGCGGCGAACCA
TTGCGAGCGTACCATGAAAATGTTGTTAAGTACAGGACGAGTTGATGTGG
CACAAAAAGACTTTGAAGGAGAATCGGCCCTGTTTTATCTAGTAGAAAAC
ATTGTTGATAAAAGCGGGGAAGATGTAGGCCATGATAAATCTTCAGATCT
TGTTGTTAAGAGATTGGATGCATGCTTGAGAATGTTGTTAGAAAAGAAGC
TAAACTTTAAAGAGCTTGGGAAGAACGGAGATTCAGCTTTTCATCGATTG
CTACAAAACTATTACGTCAGTTTACAATTGGTCATCAATTTTGTCGAAAT
GTGTGGGCCTGCGATCtcattgaaaaacaaatttggaTTCACGCCTATTC
ATGTTTGTGTACGCACGGGGTGCGAAGANATCtcattgaaaaacaaattt
ggaTTCACGCCTATTCATGTTTGTGTACGCACGGGGTGCGAAGAGAAGTT
CAGTAGAGAGCGTGTCGATATTTTAAGATATCTTTGTATCCTGAGCTGCA
AAGAAGATTTAGATGCTGGCGATGTTGCCTTGAAGACGCCACTCATCCAT
TCCATTATCAACGGAAATAAAACGTTTTGCCGTATCTTATTTTCAAACGG
TGCTAACATTGAGCAACCTGATAAACATGGGTTATCTCCATTACATTACG
CGTGTATGTGTAGTGATGAGTCCGTAGTTGATACGCTTTTAGATTGCGGA
GTTAATGTTCATTTGAGGGACCACGCGGGCGATTTTGCTATCGTTTACGC
GGCCGCTCACGGGCGGATGGAGTTGGTAAAGAAACTTTATCCTTTTTACG
AACAGTCTAGAGAGCTTCATAACCGCTTGTTAACAGTCGCAGATTTCAAC
GGCCATCGTAAATGCCATGAGATGCTGAAAATGATTAAGGAATGGGATAT
TATCGATTTGGAAACTCCCAAGGTTAGTAAAATTACGAAAGTGGAAGTTG
AACTACGAGAAGTTGATGCTTGGTTACGTCAGAAACAAGAATATTTACGA
CGTAATCGACGCCTATATTTCATTACACCGATGGAGAAATTCTACATCCT
TCAATCGCTACGTGAAAACGAAAATCATGAAGTTTGTAACGCGATTATCG
ATTTGGTTACTCGTATTTCTGAGGAAATCAATGAGCGAAACCAACTCTTT
CGTTTTAAACCAGTTTTGGTTGGAAGCATGGCTGAGGAAACCAAAATTGG
ACAAATCGACTCGTTGGAGTTCCACTGTGAAATGTATGAATTATCACAGA
GTCTGGATCTAGCGAAATCGGCCGTCAAGAGTGATAAACAAAACGAAAAT
GGTAGCCATCCAACGTCTGGGTTTGTCCGTACCTCAATCAACAACCGAGA
TAATAAAAAGAATATGTCTAATCAAGGAGTGACGGCCCAATCGAAATTAG
TCCAAATAATAGATGACATTGCTTATCTATCTTCCTTTAATATGATTCGT
GCCTTCACTAAAGCGATCAGCGAGGTTCTATGTGACGAACAAATATGGCA
GAACTTACAGTTGTCATGGCACCCGGATACAAAAGAATTAGCTCGCAATA
CAAGCACCATCGAAGTACATTGGGTGGGTAAAAATTACAAATACAAGAAG
ATCCTTATTCATTTGATCCCCACTGTGTTTTTAATGGAGGAAGTAAAGCC
CTCGACACACTTGGTTAAATTGTTGAAAAATCTTGACAACTTGTCAGAAA
CTTCACATGCGACACGTTTGATCGCTCAAAATGTAAAAAGTTTTGATGTG
GATAGGCCTGATTTATTATGGAAAGTAGATTACACACCATTTGAGCTATC
CGTATTTCGTCTTGTACCGCGTATTGGAAGGCTACAAACTATCTAAACTT
GTCCGAAGCGAACAAGTCTGTCCGAGATTATTCAATCTGACTCATTTTCC
AAAACTGTCTCTAAAAGCAAGCGAATACCTACCTACAGATCTGCTTAAGA
CGTGCTTATTATACGAACTAACATCACGCTTGGAAATTGGAGGGATGGAA
TATTTGAGGCAGACCGACTCGGTTGGTTGGGCATTTCATATTCTTAATCG
AGTAGGAAATTTTTTGGAGAAGACTGAATCGATTCCTGACTTCTTTGACG
AAGAAATCGATTTGAATGATGAAAAGTTGGACGAGATTATCATGGCAATT
TGTAACATCGGTAAAAGCTGGTTACGTCATCAGTGGGAGGATTTATACCA
TGGCCGGAAACCACCCCTTGAAAATAAACGTATATTTGCTGATACCTCTT
CGCCCAAATTGTAGGAGGATTGATAAAGTATTGGTGTATAATttaggtgt
tttttttttttcgtattaAAATTTTTCCATTATGAATCTTCTATGGCCAG
AtacaaatttctttgttctccagatacaaaatttctttgttcaacTAATT
CGGTTTTGacttcagtttgattttttaacaagagtTTTTACATTGAATCA
AACCATTCAAATCCTTCCTGTTTTCGACAGCAATTCTTAAATGTCGaact
cttctgtgcttaattgtaggtggAGTTACTTTGcaatgttttggaaaaaa
atcaccccAATAGCATTTTATAATGACCACCAGCTGATTTTCACCCAGAG
TACccctagagtctacttctgactgaactttgcttcctgatgattttgat
ggcgtTGAGTTTAGTTAAGTAGAATCTTGAATTTTTCACtatcgttttca
aaaattatgagaaaacaacaaatcaataaaatatattctaaaacCCCATC
AAAGTTTATTAAAACTATTaaactataataaaaacatgaaaatacctgaa
aatatctgaaaaagaaTTGCTCTATTGGTCATGCTTTTGTGTTTGGTTTT
CTCCAAAAaaggactggatctagtggcatgtatttgctaccacctcaagc
aaagccaaaaaatggGAGCCTGACAAATTACACCGAGctacttatcagcg
ccatctAGTCTATCAAAAAATCcaaagtggaccccgggctagagTACCCT
CTGCTTTTTCCTCCCccttacaattaagcacagaagaaTAGCTTGGGAAT
CCAAGCAGTAAACTtcgttcaattttttatttttgacgtttttattGCTA
AAATGTTAGAACTTTGTAATCAGAGgaaattttgttctaaaatgtCGAGC
TTTGATTCCCATATCGAACGAAGAATCCACTTTGTGTTTAATCATGATGC
CATCATATGTCAAAACATTATTTTCTATTACAGTGTCACTTTAAACGCCT
TCTCTCTTGACAGTATAACAGTATATGTAAATTATTTATACAGAGACACG
ATTTGTAATCTCTATTCTCACATATTAATTAGAAATACATGCTTTAAAAC
AGAGAAAAATTCTTAATCTGCCTCGTCTTGGTATGACTTCATATTATAAT
ACATCGTATGTAGAAAGTGTATCTCTTTTAAAAAACCTCAagaaatgaga
aagaaaaataacttgTGATAACAAACTATTACTTCTGAAATAAATAAAGT
GTGCGAGTTATGAGTTGGTTGCTACAATTTTTAGCGTTGTTTTGTATATT
ATGCTCAGTAAAAGGT
Run BLAST on NCBI

protein sequence of TCONS_00047816-protein

>TCONS_00047816-protein ID=TCONS_00047816-protein|Name=TCONS_00047816-protein|organism=Clytia hemisphaerica|type=polypeptide|length=786bp
MLSDRKKSFDLAEILGELNEDEQEPGKIAQKLLDTVVLFILQAKGLKSQD
ASTGYHEIMNVSDYHILYNFFKTRLDIALYEQENLESVSRILYERAKDLI
LHSDGVTNGQMKALGRTLLHEVMGYHRDHFHSDDSEHDCGCLLVKMLISY
NADVNAQDKYGTTPFHESAANHCERTMKMLLSTGRVDVAQKDFEGESALF
YLVENIVDKSGEDVGHDKSSDLVVKRLDACLRMLLEKKLNFKELGKNGDS
AFHRLLQNYYVSLQLVINFVEMCGPAISLKNKFGFTPIHVCVRTGCEXIS
LKNKFGFTPIHVCVRTGCEEKFSRERVDILRYLCILSCKEDLDAGDVALK
TPLIHSIINGNKTFCRILFSNGANIEQPDKHGLSPLHYACMCSDESVVDT
LLDCGVNVHLRDHAGDFAIVYAAAHGRMELVKKLYPFYEQSRELHNRLLT
VADFNGHRKCHEMLKMIKEWDIIDLETPKVSKITKVEVELREVDAWLRQK
QEYLRRNRRLYFITPMEKFYILQSLRENENHEVCNAIIDLVTRISEEINE
RNQLFRFKPVLVGSMAEETKIGQIDSLEFHCEMYELSQSLDLAKSAVKSD
KQNENGSHPTSGFVRTSINNRDNKKNMSNQGVTAQSKLVQIIDDIAYLSS
FNMIRAFTKAISEVLCDEQIWQNLQLSWHPDTKELARNTSTIEVHWVGKN
YKYKKILIHLIPTVFLMEEVKPSTHLVKLLKNLDNLSETSHATRLIAQNV
KSFDVDRPDLLWKVDYTPFELSVFRLVPRIGRLQTI
Run BLAST on NCBI

transcript from alignment at scaffold_136:297501..301816

Legend: exonthree_prime_UTRCDSfive_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00047816 ID=TCONS_00047816|Name=TCONS_00047816|organism=Clytia hemisphaerica|type=transcript|length=4316bp|location=Sequence derived from alignment at scaffold_136:297501..301816 (Clytia hemisphaerica)
ACCTTTTACTGAGCATAATATACAAAACAACGCTAAAAATTGTAGCAACC AACTCATAACTCGCACACTTTATTTATTTCAGAAGTAATAGTTTGTTATC AcaagttatttttctttctcatttctTGAGGTTTTTTAAAAGAGATACAC TTTCTACATACGATGTATTATAATATGAAGTCATACCAAGACGAGGCAGA TTAAGAATTTTTCTCTGTTTTAAAGCATGTATTTCTAATTAATATGTGAG AATAGAGATTACAAATCGTGTCTCTGTATAAATAATTTACATATACTGTT ATACTGTCAAGAGAGAAGGCGTTTAAAGTGACACTGTAATAGAAAATAAT GTTTTGACATATGATGGCATCATGATTAAACACAAAGTGGATTCTTCGTT CGATATGGGAATCAAAGCTCGacattttagaacaaaatttcCTCTGATTA CAAAGTTCTAACATTTTAGCaataaaaacgtcaaaaataaaaaattgaac gaAGTTTACTGCTTGGATTCCCAAGCTAttcttctgtgcttaattgtaag gGGGAGGAAAAAGCAGAGGGTActctagcccggggtccactttgGATTTT TTGATAGACTagatggcgctgataagtagCTCGGTGTAATTTGTCAGGCT Cccattttttggctttgcttgaggtggtagcaaatacatgccactagatc cagtccttTTTTGGAGAAAACCAAACACAAAAGCATGACCAATAGAGCAA ttctttttcagatattttcaggtattttcatgtttttattatagtttAAT AGTTTTAATAAACTTTGATGGGgttttagaatatattttattgatttgtt gttttctcataatttttgaaaacgataGTGAAAAATTCAAGATTCTACTT AACTAAACTCAacgccatcaaaatcatcaggaagcaaagttcagtcagaa gtagactctagggGTACTCTGGGTGAAAATCAGCTGGTGGTCATTATAAA ATGCTATTggggtgatttttttccaaaacattgCAAAGTAACTccaccta caattaagcacagaagagttCGACATTTAAGAATTGCTGTCGAAAACAGG AAGGATTTGAATGGTTTGATTCAATGTAAAAactcttgttaaaaaatcaa actgaagtCAAAACCGAATTAgttgaacaaagaaattttgtatctggaga acaaagaaatttgtaTCTGGCCATAGAAGATTCATAATGGAAAAATTTta atacgaaaaaaaaaaaacacctaaATTATACACCAATACTTTATCAATCC TCCTACAATTTGGGCGAAGAGGTATCAGCAAATATACGTTTATTTTCAAG GGGTGGTTTCCGGCCATGGTATAAATCCTCCCACTGATGACGTAACCAGC TTTTACCGATGTTACAAATTGCCATGATAATCTCGTCCAACTTTTCATCA TTCAAATCGATTTCTTCGTCAAAGAAGTCAGGAATCGATTCAGTCTTCTC CAAAAAATTTCCTACTCGATTAAGAATATGAAATGCCCAACCAACCGAGT CGGTCTGCCTCAAATATTCCATCCCTCCAATTTCCAAGCGTGATGTTAGT TCGTATAATAAGCACGTCTTAAGCAGATCTGTAGGTAGGTATTCGCTTGC TTTTAGAGACAGTTTTGGAAAATGAGTCAGATTGAATAATCTCGGACAGA CTTGTTCGCTTCGGACAAGTTTAGATAGTTTGTAGCCTTCCAATACGCGG TACAAGACGAAATACGGATAGCTCAAATGGTGTGTAATCTACTTTCCATA ATAAATCAGGCCTATCCACATCAAAACTTTTTACATTTTGAGCGATCAAA CGTGTCGCATGTGAAGTTTCTGACAAGTTGTCAAGATTTTTCAACAATTT AACCAAGTGTGTCGAGGGCTTTACTTCCTCCATTAAAAACACAGTGGGGA TCAAATGAATAAGGATCTTCTTGTATTTGTAATTTTTACCCACCCAATGT ACTTCGATGGTGCTTGTATTGCGAGCTAATTCTTTTGTATCCGGGTGCCA TGACAACTGTAAGTTCTGCCATATTTGTTCGTCACATAGAACCTCGCTGA TCGCTTTAGTGAAGGCACGAATCATATTAAAGGAAGATAGATAAGCAATG TCATCTATTATTTGGACTAATTTCGATTGGGCCGTCACTCCTTGATTAGA CATATTCTTTTTATTATCTCGGTTGTTGATTGAGGTACGGACAAACCCAG ACGTTGGATGGCTACCATTTTCGTTTTGTTTATCACTCTTGACGGCCGAT TTCGCTAGATCCAGACTCTGTGATAATTCATACATTTCACAGTGGAACTC CAACGAGTCGATTTGTCCAATTTTGGTTTCCTCAGCCATGCTTCCAACCA AAACTGGTTTAAAACGAAAGAGTTGGTTTCGCTCATTGATTTCCTCAGAA ATACGAGTAACCAAATCGATAATCGCGTTACAAACTTCATGATTTTCGTT TTCACGTAGCGATTGAAGGATGTAGAATTTCTCCATCGGTGTAATGAAAT ATAGGCGTCGATTACGTCGTAAATATTCTTGTTTCTGACGTAACCAAGCA TCAACTTCTCGTAGTTCAACTTCCACTTTCGTAATTTTACTAACCTTGGG AGTTTCCAAATCGATAATATCCCATTCCTTAATCATTTTCAGCATCTCAT GGCATTTACGATGGCCGTTGAAATCTGCGACTGTTAACAAGCGGTTATGA AGCTCTCTAGACTGTTCGTAAAAAGGATAAAGTTTCTTTACCAACTCCAT CCGCCCGTGAGCGGCCGCGTAAACGATAGCAAAATCGCCCGCGTGGTCCC TCAAATGAACATTAACTCCGCAATCTAAAAGCGTATCAACTACGGACTCA TCACTACACATACACGCGTAATGTAATGGAGATAACCCATGTTTATCAGG TTGCTCAATGTTAGCACCGTTTGAAAATAAGATACGGCAAAACGTTTTAT TTCCGTTGATAATGGAATGGATGAGTGGCGTCTTCAAGGCAACATCGCCA GCATCTAAATCTTCTTTGCAGCTCAGGATACAAAGATATCTTAAAATATC GACACGCTCTCTACTGAACTTCTCTTCGCACCCCGTGCGTACACAAACAT GAATAGGCGTGAAtccaaatttgtttttcaatgaGATNTCTTCGCACCCC GTGCGTACACAAACATGAATAGGCGTGAAtccaaatttgtttttcaatga GATCGCAGGCCCACACATTTCGACAAAATTGATGACCAATTGTAAACTGA CGTAATAGTTTTGTAGCAATCGATGAAAAGCTGAATCTCCGTTCTTCCCA AGCTCTTTAAAGTTTAGCTTCTTTTCTAACAACATTCTCAAGCATGCATC CAATCTCTTAACAACAAGATCTGAAGATTTATCATGGCCTACATCTTCCC CGCTTTTATCAACAATGTTTTCTACTAGATAAAACAGGGCCGATTCTCCT TCAAAGTCTTTTTGTGCCACATCAACTCGTCCTGTACTTAACAACATTTT CATGGTACGCTCGCAATGGTTCGCCGCTGATTCGTGAAACGGCGTCGTCC CGTATTTGTCTTGCGCGTTCACGTCAGCGTTATAACTGATTAACATTTTA ACGAGCAAACACCCACAGTCATGCTCACTGTCATCGCTATGGAAATGGTC TCTATGGTAACCCATAACCTCGTGTAGTAAGGTGCGACCCAGGgctttca tttgtccgtttgtAACACCATCTGAATGCAAGATCAAATCTTTAGCTCGT TCATACAATATCCGTGACACCGACTCTAGATTCTCTTGCTCATAGAGTGC GATATCTAGTCTAGTTTTGAAGAAATTGTACAAAATGTGATAGTCGCTAA CATTCATAATTTCATGATAGCCTGTACTCGCATCTTGGCTCTTTAGTCCT TTAGCCTGTAAGATAAAGAGGACAACTGTGTCCAGGAGTTTTTGAGCGAT TTTCCCAGGTTCTTGTTCATCCTCGTTTAATTCACCGAGGATTTCAGCCA AATCAAAACTCTTCTTTCTGTCCGAGAGCATGACAGAGCAGCGTTGGTTT CAACTTTTAAGTTTATCACAAAATCAATATATCATTGATCCTGAGTACAT TGACGATGATAGAGTTCCGCAATATTCCGTGATAATCTTAAGAAGATTGT GTTCTGATCTCCAAATAACTTGTTAGACTTGAGCACTAAGATGTTACTGT ATTTAAAGTATTTCAAGTGTTTTTCTTTGACAGTCTGTGCAGTTTCCTCA GCTAACGTTTGCAAAG

Coding sequence (CDS) from alignment at scaffold_136:297501..301816

>TCONS_00047816 ID=TCONS_00047816|Name=TCONS_00047816|organism=Clytia hemisphaerica|type=CDS|length=2361bp|location=Sequence derived from alignment at scaffold_136:297501..301816 (Clytia hemisphaerica)
TTAGATAGTTTGTAGCCTTCCAATACGCGGTACAAGACGAAATACGGATA
GCTCAAATGGTGTGTAATCTACTTTCCATAATAAATCAGGCCTATCCACA
TCAAAACTTTTTACATTTTGAGCGATCAAACGTGTCGCATGTGAAGTTTC
TGACAAGTTGTCAAGATTTTTCAACAATTTAACCAAGTGTGTCGAGGGCT
TTACTTCCTCCATTAAAAACACAGTGGGGATCAAATGAATAAGGATCTTC
TTGTATTTGTAATTTTTACCCACCCAATGTACTTCGATGGTGCTTGTATT
GCGAGCTAATTCTTTTGTATCCGGGTGCCATGACAACTGTAAGTTCTGCC
ATATTTGTTCGTCACATAGAACCTCGCTGATCGCTTTAGTGAAGGCACGA
ATCATATTAAAGGAAGATAGATAAGCAATGTCATCTATTATTTGGACTAA
TTTCGATTGGGCCGTCACTCCTTGATTAGACATATTCTTTTTATTATCTC
GGTTGTTGATTGAGGTACGGACAAACCCAGACGTTGGATGGCTACCATTT
TCGTTTTGTTTATCACTCTTGACGGCCGATTTCGCTAGATCCAGACTCTG
TGATAATTCATACATTTCACAGTGGAACTCCAACGAGTCGATTTGTCCAA
TTTTGGTTTCCTCAGCCATGCTTCCAACCAAAACTGGTTTAAAACGAAAG
AGTTGGTTTCGCTCATTGATTTCCTCAGAAATACGAGTAACCAAATCGAT
AATCGCGTTACAAACTTCATGATTTTCGTTTTCACGTAGCGATTGAAGGA
TGTAGAATTTCTCCATCGGTGTAATGAAATATAGGCGTCGATTACGTCGT
AAATATTCTTGTTTCTGACGTAACCAAGCATCAACTTCTCGTAGTTCAAC
TTCCACTTTCGTAATTTTACTAACCTTGGGAGTTTCCAAATCGATAATAT
CCCATTCCTTAATCATTTTCAGCATCTCATGGCATTTACGATGGCCGTTG
AAATCTGCGACTGTTAACAAGCGGTTATGAAGCTCTCTAGACTGTTCGTA
AAAAGGATAAAGTTTCTTTACCAACTCCATCCGCCCGTGAGCGGCCGCGT
AAACGATAGCAAAATCGCCCGCGTGGTCCCTCAAATGAACATTAACTCCG
CAATCTAAAAGCGTATCAACTACGGACTCATCACTACACATACACGCGTA
ATGTAATGGAGATAACCCATGTTTATCAGGTTGCTCAATGTTAGCACCGT
TTGAAAATAAGATACGGCAAAACGTTTTATTTCCGTTGATAATGGAATGG
ATGAGTGGCGTCTTCAAGGCAACATCGCCAGCATCTAAATCTTCTTTGCA
GCTCAGGATACAAAGATATCTTAAAATATCGACACGCTCTCTACTGAACT
TCTCTTCGCACCCCGTGCGTACACAAACATGAATAGGCGTGAAtccaaat
ttgtttttcaatgaGATNTCTTCGCACCCCGTGCGTACACAAACATGAAT
AGGCGTGAAtccaaatttgtttttcaatgaGATCGCAGGCCCACACATTT
CGACAAAATTGATGACCAATTGTAAACTGACGTAATAGTTTTGTAGCAAT
CGATGAAAAGCTGAATCTCCGTTCTTCCCAAGCTCTTTAAAGTTTAGCTT
CTTTTCTAACAACATTCTCAAGCATGCATCCAATCTCTTAACAACAAGAT
CTGAAGATTTATCATGGCCTACATCTTCCCCGCTTTTATCAACAATGTTT
TCTACTAGATAAAACAGGGCCGATTCTCCTTCAAAGTCTTTTTGTGCCAC
ATCAACTCGTCCTGTACTTAACAACATTTTCATGGTACGCTCGCAATGGT
TCGCCGCTGATTCGTGAAACGGCGTCGTCCCGTATTTGTCTTGCGCGTTC
ACGTCAGCGTTATAACTGATTAACATTTTAACGAGCAAACACCCACAGTC
ATGCTCACTGTCATCGCTATGGAAATGGTCTCTATGGTAACCCATAACCT
CGTGTAGTAAGGTGCGACCCAGGgctttcatttgtccgtttgtAACACCA
TCTGAATGCAAGATCAAATCTTTAGCTCGTTCATACAATATCCGTGACAC
CGACTCTAGATTCTCTTGCTCATAGAGTGCGATATCTAGTCTAGTTTTGA
AGAAATTGTACAAAATGTGATAGTCGCTAACATTCATAATTTCATGATAG
CCTGTACTCGCATCTTGGCTCTTTAGTCCTTTAGCCTGTAAGATAAAGAG
GACAACTGTGTCCAGGAGTTTTTGAGCGATTTTCCCAGGTTCTTGTTCAT
CCTCGTTTAATTCACCGAGGATTTCAGCCAAATCAAAACTCTTCTTTCTG
TCCGAGAGCAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_030428XLOC_030428Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00047816-proteinTCONS_00047816-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00047816-exon-scaffold_136-1491911889:297501..301816TCONS_00047816-exon-scaffold_136-1491911889:297501..301816Clytia hemisphaericaexon
TCONS_00047816-exon-scaffold_136-1510915933:297501..301816TCONS_00047816-exon-scaffold_136-1510915933:297501..301816Clytia hemisphaericaexon
TCONS_00047816-exon-scaffold_136-1575043694:297501..301816TCONS_00047816-exon-scaffold_136-1575043694:297501..301816Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_136supercontigscaffold_136:297501..301816 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.095022 0.145689 0.580002 0.556799 0.0349479 0.0736435 0.233225 0.395097 0.444042 0.180334 1.06772 0.494767 2.06003 1.86673 0.91695 1.22422 0.657927 0.563808 0.316445 0.178633 1.59815 1.90852 0.326851 0.682309 0.428496 0.907265 0.383171 0.459442 0.0671153 0.0409346
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR020683Ankyrin_rpt-contain_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00047816 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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