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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00047897 ID=TCONS_00047897|Name=TCONS_00047897|organism=Clytia hemisphaerica|type=transcript|length=479bp
GTAAAATTCGTTCGTGAAACGCACGAAAAATTGACcttcacaaaagaaaa
acaacatgGCGGAGTGACAACAACAAAAGATTGAGtggtaaattttatta
aaacacaTGGTCTGAATGTTTATCATCATCTTTTAGTTTTAGTGAAACTG
AAAACTTGATATTGACTTCACCTTGAACTGGTTGAATGAAAGATGAGCAG
CCAAACAACCTCAGCAACATCTGGAACTGGATCATCAGAAGTAAAGCAAT
ATGGAATAACATCACCAATATCTTTGGCTGGACCAAAACCTATTGATGAA
GAATTGACCCAAGGATTGGAATCAACATTGAGAAATTATGGAGTCTTTGA
AACACAAGAAGAAATCCAACACAGAATGGTTGTGTTGGGAAAATTAAACA
AGTTAGCATTAGAATGGATCTATGCTACATCAAtaaaaaaggtattttat
tgattcTTTATTGACATTAAAGGGGTGGT Run BLAST on NCBI transcript from alignment at scaffold_139:567199..579872+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00047897 ID=TCONS_00047897|Name=TCONS_00047897|organism=Clytia hemisphaerica|type=transcript|length=12674bp|location=Sequence derived from alignment at scaffold_139:567199..579872+ (Clytia hemisphaerica)
GTAAAATTCGTTCGTGAAACGCACGAAAAATTGACcttcacaaaagaaaa
acaacatgGCGGAGTGACAACAACAAAAGATTGAGtggtaaattttatta
aaacacaTGGTCTGAATGTTTATCATCATCTTTTAGTTTTAGTGAAACTG
AAAACTTGATATTGACTTCACCTTGAACTGGTTGAATGAAAGATGAGGTA
TTAATTATGTTCAATTAGTTTTGTGACTTCTTCTCCTTTTTTTACAACAt
aacaaaattaaaacataaaatNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNaagtagaaaattttgcaatttcagtcccatt
cagggtcacttttttcgcaaatttcgagtcccacgtagggtccatttttc
gaacctcagcggagcaccccggtcggtcgacaagggtagtaccccccccc
ggNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTAAAAAGTCgtaaaaaagt
gataaaatcgTAAAACTATGAATTGTCACGAAGGACATCAAATGTGTCCG
GAGGGAcgtctttaaagttttttaaaaagaattttaaaattaaatataaa
GTTCTGGACAGTTTCTGGTATCCCGGGGAGGAGAGTCAAAGTGTTCTGTT
GTTGACTGATCCTATTTTTCAACCAAATGTCTTTGAACCtagtctggaga
ccatactctgtacaaaaatatttctatcctgttaaaatcccaacaacaac
ttcactgaaatacagagtatggaattattgactcgattcaaatcacttca
aatcacaaaagaaaaaatcgttattttttcaaaacaattcaaaagcaCGC
GCCACTTtgaaacaatagagctgtttgacgtcatacttttgtttatcaaa
tcataacaataagatattagccaatcaaattctgcgattaattcttgcat
cttgtataattcccggctactactgtctatactttgatatttttttgaaa
ccacatagacagagaagtcgggtctcccagctactttgaacccagaaaaa
tcatacaaaagcAAACTTCTGAAGAATTCCTCTTAGTAGATTCACCTTCa
ccatagaccttttcgcctttccatccgccatattgaattgtatgcaaaaa
ttatggtggccgaattgccgtggtgaaattcccttagaaagtaccGTGAg
atgggtaacttgcatcagtggaggctaacatgcatagccttcaaatgaat
gacctggctggtcgttaaaataaactatattcagctcTGCACAcggctct
actctaccatttttgttttgatttaactttgtattttaatgaccagacgg
gtcattcatttgagggctatgcatgttagcctccactgatgcaaattacc
caatctcacggtatgcaaaacatatgtaaaaagaaagtattaattaaaaa
cttacatgcataattggcattatattaaagtgtaatcttgtagaagaaag
attaaatttgcttctcttgaaaactaaNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtcttagaacaagcactt
caaaagaccataacattagacagaaactcaaactgaaaaatcacccgcaa
aggtaaaaaacaatccttattcggNtctcctgggaatagagccgccaaat
gatcaaatcaaaacattgataaagtgtgacgtcataattactgctttcag
tttgcgtgttttgaaaaaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNattaagaaattccat
cttttattgttctaatgattataatatttatttataagatgctttgttgt
cttttaatctttgtgtaaacttgcatatgttttgcatacattccaacgtA
ATCCAACCAcagcattttcgttcctgtatttttgcatacaattcaagatg
gcggacggaaaggcaaaaaggtctatactgTAATATTTGCCAGGGGATGT
CACAATCGAACGTTCAATTGCCAATCAAATTAATCAAATTTACTCGAATC
taatcgaatgattgatttttGATTAGCCGAATTGATCGAACGCCAATTGA
ATTCTAATCGAATCCGAAAAACATGTGAAATTCAATTggtttcgattgag
ttcgacgAGCTTCGATACAACCCttgacatggcccgagaattctcgggtc
aaaacttttattggaattcttgtaaagcccgagtatggcccgagctggcc
cgagaattcgggccgtgttcgggccacacgcgggccactCACGGGCCACA
CCACTGCTGTTCCCCTCAGGCAAAATCGTCGATTCTGTAGAGGTCAtgaa
attgccgagtacagacattgaagaaaaaaattgaaaatggctgccgagcg
agcactgacaaaaacaaaaaatcaagagTTTTCAATTGCCTACTACAGCA
GAATAAGACAGCGAaatgcagtaaaataaaaagtaaacaaaccttgaacc
ttttgtttttcaaaataaagaaaatattctagcTGCTGTAATGTTTAAAT
tcagaaataaatccattttccaccAGACCTACAACAACCACCAGCGAAGT
TTCAAACCACGCTGTGGCATTACTGGCAAtgaattctgacttaaaaaatg
ttgctccagttccctggaaagggtatgattacacttccaaatgacttttc
tttacaataacatttgtcttctcacaaatccaaaaagatAGGCTATAATA
CCAACACGAGGGTCAACTTTTTTACAACAAACCATCAgatcaaactttat
aaagatcaaCCATGTAAATGTCACTTGTTTTTGTAATATTTGGATGATAT
TAAAACCTTTTTGCATATATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNAGTCGGCAATAGGAATTGTcagaaatttgagatttttaaaat
ttgagttGGGCAGAAATCAAATCTATCTGAAATCGAAAATAAACGACCCC
CTGTTTTGCCGTGTTTGTGTAGTGTAGTtgaattgaatttcaatttgtCT
TTCTCCAAACTTATGACATAATCTAGAAACACATTGGTGATATAACCTAC
GTGAGGTTTTCAAAGCCATCAGGGCAGTAATGAGGCTTGAGTGTGACTTT
GAATtctggctgaatttttaggcgttttcaattgatgacgtcatcaaaag
aggacaaatgcgatatctcgagattggaaaggagttttaggagatggttg
acccctcattggatcggaaattctATGTGAAATAAGATGGGAGGGGTAAC
AGTgggtatatagaaactttcagaaataaatatgttcaaattgagacatt
ttgggttcgatgacgtcatcaaaacctgaaaaatccaatatctcgagttt
gaggaAGAATTAAGCAAttgttgacccctcattggatcggaaatcatcaa
gagaatcttttgggtaaatgacaaattgatttcagtgaagtaaaaaattt
attgacctttcgatgacgtcatttagagcctaaatgacgtcacaaaacat
taaaTATGTTATTTCTCGAATTTTAGAAGGCGTGGCACTTTCTACGAAAA
CGTTaataaaatctgattttttaaaTAGTCAATGTGCAGGTAAAAAACGG
AGGTCTTCTGCACGAGAAGTGGATATAAAGTGTTGTCCCGTAAGTTTGGA
TATATTCatgattgttttgaaatcatagTATTTATTATTTGGTCTTTTAA
GTGCGTCATTTTGCCCTTAAATTCGTAAATACAGCATTATTTTCTGCGCA
AGCTAAACTGGCGTTTGTGACGACAGGAATCGTCTAGTACTTTCTATTTT
GCTACATCGCCTAGGCTAAAAGTAGTGAGAATtacacgaacgccattttt
taatgagtgttgttatgattttttttattgcggctctgtacaggaactcg
ccaaatgttcctaactgcagggaaaaataaaatatactttgttgaaatat
atatatatacatgGTTAAAACGGTTAAAAATAGCTTAAAAGCTAAATGAA
AATAATAGGTTACTCTATCAATAAACTAGAGATATGAAACTAAAACcgtt
aataaaaaaataaaaaaaacacaaagaaaacaAATGTCATAGGTAAATAT
ATTGTATATATACGTTACTCAGAATTTAGGAGGCAACGTTTACACAAGAA
CAGAAGGATTCGATGTAGAAGACTTCCCTGGTTAGGGGATAAAAATTATT
CCAGAATTGTGGAGAATAAGAAAAGATTGGTAAGATTGCATCACAGTGAT
GAATGTTAAAAATGCCATGATTTCCTGTGTGTCTTGTATCATGGGTGTGA
TCAGGATGGTTTAAAGAGATTGGTTAATGATGACGGGGGAGTTTTATCAA
TTACATGAGAGTAAAGTAGTTTGCAGTATTGAAGAATGTACAGTTTGTTT
AGGTTTAAAGGTATAAATATGTCGGCTTCATCTTGTGTGTGTTTATTAAT
GTTGTTAATAATTTTATTAGTTAAGTTCATTATTGAGGCGAGGCCCCTGG
TAGAAGGTGCTCCCCAAGAAGTTAGGCCATACTGGACTTGAGATTGAATG
AAACAGTGGTACAAGATTCAATTGACAGTGTTTGGAGCAAGGTAGCGTAC
CAGTTTCAGCATTCCAGTTGCCGTTTTTACTTTACCTAGTACGTTATTGA
CTTGAGCTTTCCATGTTGTTAACTTGTCATCAACCATGGACGCCGAGGTA
TTTGACTGTGTCCATTCTTGTGACTTCTGTATCATTGAGCTTGATGTTAA
ATGATTCTTTTGGTTCTCCTGTGAAAAGAAGGTAGCAAGATTTAGATACG
TTAAGAGAAAGTTTGTTATTGACTAGCCAGTTGCTAATTTTGTCTAGTTC
TGTGTTGACCAGTTGtagaccagacccgatcaatcgaacttgtcaaacaa
tcaaacaattgaactaatcgaactagAATCGAACctcatcgaacgattaa
agtttaaTTCTggatataatataatataatccCGGTAAATCTTTAAAAGT
CTGGGAACTGTCAAAATGGCGATCGCGTGCCAcaataaagtttttgcaag
tgAAGGAAGATATGAGGACTTACAGGGACATAAAAgtggtaaaatgtaaa
cattgcacaAACGACAtatcattaaagagaacaattaaaatcacctATCC
agaaaaaacttgtaaaacaattgaaacaatcaaaatcagccatattcgtt
tttattttttattttgacatgtgacatttgttttgattttgtatcccact
gcatatcgccgtgtcaattcaagacagaagaccataaccccctattttag
catgcacgctttccaaaaacggcctcaagtccacagaattctaatgggaa
agaggtgtattttgcaattcaaaaaaaataagaatttagaaagttccata
atatatcaaccataaacagccttaagtcctaaattttagtgcaaatttta
ttttctatgaagcattgacataaaatgtgtagccttaagtccaacacatc
tcaacctttaaagtcaattatctcaaaatggaaaaaatggacttaaggct
gtcttgaattgacacagcGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNgcttac
ttaatttacttgaaattttcggagggtcttgcctaccgttcaaataataa
aattcagaaaaatttattttctacatgaatttcgaagtCCATAAtgacgg
attcaaaattttctttcgtcacctgggctcttaggctctgctagcataag
aaaaatattttttgagcctaaaaccctgcatattatataccaatcaatca
gaaattttatgctgattaagaaaaaggtcaaaaccatggtctgaaaactT
TGTTATCTCGAgttatgaagtactttcgttttcaaaacttagaaaacgta
agtacttcgtatctcttgataatgaaattttcagaccatggttctgactt
agcctaagaaaaatattttttgagcctaaaaccctgcatattatatacca
attgatcagaaattttatgctaattaagaaaaaggtcaaaaccatggtct
gaaaactTTGTTATCTCGAgttatgaagtactttcgttttcaaaacttag
aaaaggtaagtacttcgtatctcttgataatgaaattttcagaccatggt
tctgacttttttcttaatcagcataaaatttctgatcgattggtatataa
tatgctgggttttaagctcaaaaaaatatttttcttagcctggcagagcc
taagagcccaggtgacgaaagaaaattttgaatccgccattatggatttc
gaaattcatgtagaaaataaatttttctgaattttattatttgaaNcatg
aaagtatagtccttgaagagtcagaaaacgtatgtggcgttatttggatc
aggcacaaatttccataatggcggattttagattttcaacccttttatCT
ATGggagctatgaagtactttcgttttgaaaccctccgaaaatttcaagt
aaataaagtaagccaatcaaatgttacagccacgcaaatctggaaccaaa
agtagtcatttcaaaaaatcgaaatcgaaagtgctttaTATCTCCAGATA
AGGAAATTTTCATACCATgattgtgacctttttcttgatcagcataaaat
ttgtgatcgattgatatataatATNtctgacctttttcttaatcggcata
aaatttgtgattgattggtatataatatgtctatgtttaaagtcaaaaaa
aaacttttttcaagcaagagggctaaaaggggttgaaaatctaaaatccg
ccattatggaaatttgagcgtgatccaaataacgccacagacgttttctg
actcttcaaggactatactttcatgatcaaaagaaaaaatgactatacgc
cgatgtgcatatgggacctaactcagcccctagagtacaatgaacaaata
aaaaatgtgtgattttattcaaattctctttgactcaagtattcccatga
gcgaaagcaaaattaatggctttttcccaaagcaacaaagcaacagtttg
TTATCAACGATGCAATAAaatagaatagtaggagtggtatctccatctat
atttttattacctccatgatcaaactaatcaatttttttactccAAACTG
AAAAAATCGAACtcctattgcttcaaaaatcactgaagtcaaaacgcaat
ttacccTACCTCCTGATTTGTCTCTGCTATGCTAATttataacaaacctt
tgtcatgctgtccaattacaaaaacctccaatcacaAATTTCCaccatct
tgtttcactttaaatacTGTGTCTTAAGATTCTTCAGCTACATAATatgt
acggaaaaggttttctccaggttttgtCAATCCCCAGGGCTTGAAATAAC
AGTCGGACATCAGACATTGTCCAACCCAAATTGCTCGTTGTCTGACCCAA
AAaccataattttcaagctaaagcaaccctgatcggacattttgtccgac
ccacttgcAAGGCCGATTCTGCTCGCTTATTTTCTATTCAACATTGAGCC
CCGGAGATACTtaaacaataaaagagattttaagattaatgttgaaatgt
gtatttttcaataaatgaaataatactCAACAAACAATgaggtggtttta
aacaaatcttttttattcCCACAATTTTGTGACTTTCTGACTCAAATGAG
TCggaaaagcaagaaaaattatCAGTCTGTTGGATGACgtgaacacaagt
tatttgtgacaGCAGCCTTATTGTAGAAATTTTCCTGATCTCATTTCTGA
TTCTTGGAATTAAAAAGCTTCCCAATTTTCTAGTTTgctgaaaattgtaa
aaaaaaatttaaatttcattgTAAAATTTCCACGGATAATAATAGTCAGG
TAAAATTGCAGAATACCCATACAAAAATGCATGGTCAAGAGATTATAGCT
ACAGGAACAGTAGAAATAGGTCTTTTCCTAATCACAATGTCATCTTAGAT
AATTTAAAACTCAAGCATACTCCGCGTTTCAATGGGTACAAGCTAAACAA
CATTAACAAACAAATCTAGGTCAAGCTTGTTCAGttatttttaaaacctt
ttagtggttttgttttgatatcaagCCTTCTTAGCAAGAGGATGCTTTCC
CATAGTTACACAAAAATTACCTAAAAATTGAGGGGGTTTTTAAGGTAATT
AAATATGGCATGATCAAGAAGTTTGGAAATAATCATTTCACAGagctttt
tttgcttttgacCTGTTGAGTGTTGCCTTTCCCTCATTTATGTAACCCCA
AATGACTTTGTATCTCTGACAGGAATAACAACAACAAATATTTTACGTGG
CTCTGGCTCCAGcatcaataaaaaatattttgcacacaCGTTTCCTAATT
ATGCTTTTGTGGTTTATTGTTGTGATGCCAGAGTTTTTAAACACTCAACA
TGACATTGCATCCTGCAAAAGGTCTATCAAAACTATAATAAGAGTGCACT
CACAAATATCAAAAGACCTTTTACTAATCTTGATGTTATGTTGAATAATT
TATAACTCCAGATttaaaacaatgacacattAATGTATGATTATTAAACC
AGGTGTTGCAGAAAAAAGTccccctctttgaagtgaattttctcgagttt
taTGAACTCAAATTAAAGAATCATCCTTTTCCACTATCTTTACCCTGCCC
TTTATCccaaattctaaattttaaagcaaacttttaaataaattaataaa
tgaaTTTAGAGGCTTTTTATGCTTCTGTGtgtagtttttttcatttatga
CTTCTTTCTTATTTTAGCAGCCAAACAACCTCAGCAACATCTGGAACTGG
ATCATCAGAAGTAAAGCAATATGGAATAACATCACCAATATCTTTGGCTG
GACCAAAACCTATTGTAAGAAAACCCattaaaattttattcattCAACGG
ATATTATGatttctttcataaaatttctcaaacattaaagtatttttcaa
aTACATCTAAATCTCAGTTTCAAACAGTGTTATTTATGTAGATGTTTTCT
TGCATGTATAAAGAAATGACTTTAGGTTCTAAGGGATTGAATGAACACGA
GTTTGTTTGTCTGGCGTAATAATAGTGTTTGGATACATGTGTAAATTTCt
tatttaataatttaataattttttgttcataGGATGAAGAATTGACCCAA
GGATTGGAATCAACATTGAGAAATTATGGAGTCTTTGAAACACAAGAAGA
AATCCAACACAGGTTTTCATCAGCATAGTTTTTTTACTTTGATCACAATC
TCTAAGACATCAATTGATTATATTTTGCTTTTGTCTTTCATAGGAAGCCC
AATTTTGTTCCCCCTTGATGCTACCAGGAACACTACCAATTTATTTGTAT
TTGACAACCttctattgtttaaaacattttaaagcgtcattgaaataatt
atttctctTTATTTCAAAGAATGGTTGTGTTGGGAAAATTAAACAAGTTA
GCATTAGAATGGATCTATGCTACATCAAtaaaaaaggtattttattgatt
cTTTATTGACATTAAAGGGGTGGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00047897-exon-scaffold_139-1491911889:567199..567395 | TCONS_00047897-exon-scaffold_139-1491911889:567199..567395 | Clytia hemisphaerica | exon |
| TCONS_00047897-exon-scaffold_139-1510915933:567199..567395 | TCONS_00047897-exon-scaffold_139-1510915933:567199..567395 | Clytia hemisphaerica | exon |
| TCONS_00047897-exon-scaffold_139-1575043694:567199..567395 | TCONS_00047897-exon-scaffold_139-1575043694:567199..567395 | Clytia hemisphaerica | exon |
| TCONS_00047897-exon-scaffold_139-1491911889:579116..579212 | TCONS_00047897-exon-scaffold_139-1491911889:579116..579212 | Clytia hemisphaerica | exon |
| TCONS_00047897-exon-scaffold_139-1510915933:579116..579212 | TCONS_00047897-exon-scaffold_139-1510915933:579116..579212 | Clytia hemisphaerica | exon |
| TCONS_00047897-exon-scaffold_139-1575043694:579116..579212 | TCONS_00047897-exon-scaffold_139-1575043694:579116..579212 | Clytia hemisphaerica | exon |
| TCONS_00047897-exon-scaffold_139-1491911889:579481..579560 | TCONS_00047897-exon-scaffold_139-1491911889:579481..579560 | Clytia hemisphaerica | exon |
| TCONS_00047897-exon-scaffold_139-1510915933:579481..579560 | TCONS_00047897-exon-scaffold_139-1510915933:579481..579560 | Clytia hemisphaerica | exon |
| TCONS_00047897-exon-scaffold_139-1575043694:579481..579560 | TCONS_00047897-exon-scaffold_139-1575043694:579481..579560 | Clytia hemisphaerica | exon |
| TCONS_00047897-exon-scaffold_139-1491911889:579768..579872 | TCONS_00047897-exon-scaffold_139-1491911889:579768..579872 | Clytia hemisphaerica | exon |
| TCONS_00047897-exon-scaffold_139-1510915933:579768..579872 | TCONS_00047897-exon-scaffold_139-1510915933:579768..579872 | Clytia hemisphaerica | exon |
| TCONS_00047897-exon-scaffold_139-1575043694:579768..579872 | TCONS_00047897-exon-scaffold_139-1575043694:579768..579872 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_139 | supercontig | scaffold_139:567199..579872 + |
Blast
BLAST of TCONS_00047897 vs. Swiss-Prot (Human)
Match: PAPOG (Poly(A) polymerase gamma OS=Homo sapiens GN=PAPOLG PE=1 SV=2) HSP 1 Score: 79.7221 bits (195), Expect = 2.400e-17 Identity = 39/66 (59.09%), Postives = 45/66 (68.18%), Query Frame = 1
Query: 244 KQYGITSPISLAGPKPIDEELTQGLESTLRNYGVFETQEEIQHRMVVLGKLNKLALEWIYATSIKK 441
K YGITSPISLA PK ID TQ L ++ +GVFE +EE+ HR+VVLGKLN L EWI S K
Sbjct: 17 KHYGITSPISLASPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDVSESK 82
The following BLAST results are available for this feature:
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