|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00047921 ID=TCONS_00047921|Name=TCONS_00047921|organism=Clytia hemisphaerica|type=transcript|length=3151bp
CTTTTCAAAGAAGAGAGTGGTCATGCTCAGAGAATGACGGTTCCGAGAAT
GACGGCTTGAATTTTATCCTTTATTATTGGTAAAATACAAGCAGGTATTT
TGCAAGAAGAAGATTCAAATTATTGTTTCTTGATATTTCTGGATTTTGGT
TTCTTCTCTCATTATCAGTTAAAGGACTTGGTAGTCATTCTGTTTTATTT
TGGCTGGGTGGAAAATTGATTTGCAAATTATTCACAATAGGATTTTCATA
TTTAATTTGAGACACAAGCTCTCTTTACTCACCCTTAAAGTACAAGTGAA
ATAGATATGAGTACAGAATCACCTATCCCTGTAGGTGTAACAGAATCAAA
AACATCTCCAAGGGATGCTCAAAACATGATGAATCTGGAAACAACTGATC
CAGGCCAGATTCTAGGGAGTAATGGTATTTTACCTAATTCGTCTTTGCTT
GCCAGTGGTTTGGCTTTGCGCCCAGGAAGTATTACTCCTTCGGACTCATT
TATGATCGACTCCCAATATTATAATGATCGCATTAGATCGTTGGAAAGTG
AGAAATTAACCATTATGATTGAACACAACAACTTGATCAAAGAGTTCAAC
AAAAGGATGGAATCACACATGGAAGAAATTAGGTCTTTAAAAGACTCAAA
TATTCAATATGAAACAGAGCTGAAAGACTTGCAAGAATTATCTGTTTTCT
TGGATGATGACCGTAAAAAATGTAGGAAACTTGCTAAAGAATGGCAACGG
TTTGGGAGACATACTGTTGCTGTAATGAGAGCAGAAATGCAAGGTTACCA
GGACAAAattaaaaaccttgaaattaaACAGCAAAAACTAGTCAAAGAAA
ATACAGAACTTAGAGATCTATGTGTTTATCTTGATCAACAGCGGTCAGGG
GCAGGAATAGATGGCCAAAGTAATGGATTAAACTACTCTGTTTGCCAAGA
ATGCACTCAGTTAAAGAAAGAGCATGGAACAATTCAAAGAGGAAAAAGCT
TATACAATCAAAATATCACTGCAGAAAATTTCCATGATTTGCAAAATCAA
GTGGCACAACttgaaagagaaaaagattCCCTTCATAAATTATTAATGTT
CGGAGGGAAAAGTCGGCGTGATAAAAAGCGAGTTTCATTTTCGGTGCCCA
CCGACGAAGAATACGACTCATCTTCGACAACGTCGGAGCTTTCGGATCGG
TTAGATTTTCCACCGTCCTTTGGAGGAAGTCACGAGAACTTCAATACAAT
CATTGTCGGACATTTCTCCGCGGAACAACGATTTGGCACGCCTTCATCAC
AACTCACTGTACCAACAAAACTCTTTGAATGAAGAAGAAATCAACGAAAT
TCGAGAAAAATTGAGCCGAAGTACAACTGGAGATGCCACCTTGAGTGAAA
GAGAAATTGCCGTACTTAAAGATATGTGCcatGTTGCATCGACACAATCG
AAACTTCGATCCAACAGTAATGCAAGTAACGCATCCAATTCAAGCTTAAA
CGCCTCCTTTGACCAATCGCCTTTATCACCGCCACCCGCCCTTAATGAGG
TTCCGCTCTATAAGCCCGCACCTCCTGCAGTTGCAACCAAACCTGCCATC
CCTAGCAAACCTGCAATGACTTCCTCTAAAGAAGATCTTCTTACTGAAGA
CAACCCACAACCACTGAATTCTGTTACTGAGTCAGCAGAAAGTAAGAAGC
CACAACAGACTGGACCACCACCACTGCCGAGCTATAACGAAATTATGAAA
GATGTCGAAGATCGGACGCCTTCGACCGCCAAGGTTGAagagaaagaaag
tgaaagtgaaacttGAATTTTTTACCAAAGCTGGGAGGAGAATATTTGGG
CTTCATGTAGGATGATATACTGATCAAGTGCCTGTGATAGGAATAAAAAG
GGAAGCAACTCGCTTAATCAGGCTCAATCAATTCACTGATTGGTAAACTT
TGATGGAATTGAATTCAATGTCTACCAAAGTGTGATAGAAATGTTGCGAA
ATGCTGCGGGTTTGCTACATGCAAGTAAACACACTTCCATTTTTAAAGAA
TGTTATATGAAAGCTTTGTTTAACGTAATGGCAAAACAAGACCATTGAGA
TTGGGACAAAATGCATCGACTGAAAATGGGTCAGTCTACACATAGCCTTA
CACGTTCAGTcgggataaattatttttttctacaatCTGATAGAACTACC
TTACGTGCATTAGTGGCATGGACAAAATTTTTTACATGTTCTTTTAACTA
TAGAGTGTCGTCTGTTGCACTGTCATAATGTCGCTATATAAAGCAAATAC
AGCAGTGCTGTGTTAGCTTTCAATCATGTAAGGATGACTTTAATCGTACT
TACAAGAATTCGTGAGTATCAATTTCTGGAATTAAAATGTATCTCTGTTG
TATGAAATGAGTTTTGCTAATGGATTCTGATTTGAGGTAATTGATACCCT
TTTGATGTATACCGATGACAGTGgcttttatatattttcttattctttct
TTTCGTAGTAGAACTCTTTAGTATCGGTATTGTGTAACATTTTCTACTCT
TACTAAACAGTATCAAGCTATACATTAGCTACGTGCTTCAAAAAATGCTT
CAAAGTTCTGCTATAGTCTGCGGACCCTAATTAACATTTCTATCTAACTG
ACTGGCTGACTGAATAAATGCACGGGGTAAATCACTTGGCCCCTAGTAGT
TAGTTCatgtaatgtttccagctcacccaataagagacttatacgcatgc
gtaatttgtcgttcttttaaaccacatgcagttaattcccgtgacaaTCA
AAGAGGGATGAATCTGTAGGCgtgtacagtcactttcggtcggggttttT
TCGGGGAAATTTGACGTtctttttgtcactttttaatagttatttgtcgt
tctttttttatgggtctggaaacgttagatggacAGTCTCCTACGGCACA
CTTTGTGTGTTTCTCAGTCTATAATCATTGAATTTTCTTACTGtaaaaac
tttgtttgattttgctactatgaaaattatattttggatAGGTAAGGAAG
ACTCGTGTTTACtatttataaattaaaatttatacCACATTAATTGTaca
tatttaaaaaatcattaataaGAAGATGAATGAAACAGAGTTGCCTTAGT
A Run BLAST on NCBI transcript from alignment at scaffold_139:444009..451697- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00047921 ID=TCONS_00047921|Name=TCONS_00047921|organism=Clytia hemisphaerica|type=transcript|length=7689bp|location=Sequence derived from alignment at scaffold_139:444009..451697- (Clytia hemisphaerica)
CTTTTCAAAGAAGAGAGTGGTCATGCTCAGAGAATGACGGTTCCGAGAAT
GACGGCTTGAATTTTATCCTTTATTATTGGTAAAATACAAGCAGGTATTT
TGCAAGAAGAAGATTCAAATTATTGTTTCTTGATATTTCTGGATTTTGGT
TTCTTCTCTCATTATCAGTTAAAGGACTTGGTAGTCATTCTGTTTTATTT
TGGCTGGGTGGAAAATTGATTTGCAAATTATTCACAATAGGATTTTCATA
TTTAATTTGAGACACAAGCTCTCTTTACTCACCCTTAAAGTACAAGTGAA
ATAGATATGAGTACAGAATCACCTATCCCTGTAGGTGTAACAGAATCAAA
AACATCTCCAAGGGATGCTCAAAACATGATGAATCTGGAAACAACTGATC
CAGGCCAGATTCTAGGGAGTAATGGTATTTTACCTAATTCGTCTTTGCTT
GCCAGTGGTTTGGCTTTGCGCCCAGGAAGTATTACTCCTTCGGACTCATT
TATGATCGACTCCCAATATTATAATGATCGCATTAGATCGTTGGAAAGTG
AGAAATTAACCATTATGATTGAACACAACAACTTGATCAAAGAGTTCAAC
AAAAGGATGGAATCACACATGGAAGAAATTAGGTCTTTAAAAGACTCAAA
TATTCAATATGAAACAGAGCTGAAAGACTTGCAAGAATTATCTGTTTTCT
TGGATGATGACCGTAAAAAATGTAGGAAACTTGCTAAAGAATGGCAACGG
TTTGGGAGACATACTGTTGCTGTAATGAGAGCAGAAATGCAAGGTTACCA
GGACAAAATTAAAAACCTTGAAATTAAACAGCAAAAACTAGTCAAAGAAA
ATACAGAACTTAGAGATCTATGTGTTTATCTTGATCAACAGCGGTCAGGG
GCAGGAATAGATGGCCAAAGTAATGGATTAAACTACTCTGTTTGCCAAGA
ATGCACTCAGTTAAAGAAAGAGCATGGAACAATTCAAAGAGGAAAAAGCT
TATACAATCAAAGTAAGTTCTTTTACTAAAACTAAGTAAAATCATACTTG
TAATTTTGAATGTCATCATTGTTATCTAGGATGTCGGCGTTAGGGGAGTT
GCCAAAATTAGACATAATCATGATATATAATAGCTTGGGGATCCTAAAAT
TAGAGTAAAATAGTCAAAAATTTAGAAATACTGATTCAGTGGTGCCAAAA
ATCTTAAACTGAGATATTTTTTTTCTTACTTCAAAATGATAAAGGAAAAA
CTCCCCAGTAGCTATTAAATTGATGCTTTATATACCATCAACCCTGTTTT
TAAGCATTATACTTAATATCGTTCCTGTTTTAATATGCCTTTTTATCATT
ACTATTATAGTTCTCCCTTTTCTTTTGACTTTGCTCCTTAGTTAAGAGTG
ATTTAATCAATTAATCGAACATTCCCTACTATTTGAATGTCATTAGCTAA
GTAATAATGTTGTTGTCATAAAATAATGATCCATGACCCCTTGTCATTGA
GAATTATTTTTCAAATACCATTCTTATAAGGACAACTAAGACAATTAAAT
GATCATATTATCTACCACTTGCATTCATACTTTATTTATTTTAGATAAAA
AAGGTTTAATTATTTTGATGGATTAATCCATTTTCTAATCTAAATTTAGG
ATATTTTTGAAAATTACAAGCAAAAAAAAAGCTGGGGGCATGGTAAAAAA
TTAGAAGAAAATTTTATTTTCAATTTATTTTAAGGTAGGAATTCGGCAAT
TGATTTTAATCAATTATTATCATTTTATTCAGATATCACTGCAGAAAATT
TCCATGATTTGCAAAATCAAGTGGCACAACTTGAAAGAGAAAAAGATTCC
CTTCATAAATTATTAGTAAGGAATACTTTTTTTCATCTATCTCTATTTAA
AAATTCTCCATTCAAAAAAAATAAGAAATGTATCAATGAAATGTTATTAT
TATGTTTAGTAACAAGTGAATACTACTCAATTTTTTAATATATCTTGCAC
CCAAATTTGAGTTATTTCTTTTCCATTTTTAATTAGATGTTCGGAGGGAA
AAGTCGGCGTGATAAAAAGCGAGTTTCATTTTCGGTGCCCACCGACGAAG
AATACGACTCATCTTCGGTAAGATTTTGTTTATCTGTTAATTTCGTATTA
CCTCTTGTTTTAAGAAAAAACAAAAGAAAACTGTATCGTCAGTCGATTTT
TTCGAAAAGGAATTCAACAAAACTAGGTAGCCCAAATCTTTTCGTTGTAC
GTGATTCGAAATGACTTTTGTAAATCATCTTTGTTGAAAGCTGGCGTAAC
CTGAGCAGATTTTTAATGTGTCATAGTTGAAGGGCTGCTTTATTATTTAC
CTTCTCTTTATGATAGTCAATGCATATTTTTCTTATGATTTGTATCTTTT
ATCAAAATTCACATACACGTGATAAAGTTTGTTAACAAAATCTAAAAGTT
TGAAAATAAAACTTTATGGTAACTTTGTTATACTGTTATCAGTGAAAAGG
TGGTTTTCGCGAAATCTTTAGGCTATAAGCTTTTTGACACGAAATAACGT
AATAAAGATAAAATAGAGGTCTCCTTTATGACATTTCATCTTTGTAAAAA
CCTTGAAACAGACTTGTTACAATTACTCCTTAAATCCTTCGAAGTCTCTT
TTGGTTTTTTCGTCCATTCATCAAAGACATACATTTCAGTGAAAATAAGA
TTAACTTATCGGATTAACAAGGAAACAATGATTTTGATTTGTATTGTCTG
AAATATGCGACCTAACTGTTATTTCTTTANCGGTTTTTTCATCCATTCAT
CAAAGACATACATTTCAGTGAAAATAAGATTAACTTATCGGATTAACAAG
GAAACAATGATTTTGATTTGTATTGTCTGAAATATGCGACCTAACTGTTA
TTTCTTTAAAAAATCCTGCTTCCTTCTCCCATTTTGATTTTATAAACGGT
TTTCCATCTAACAATTTTGTAAGAATTTCACACGTCTCTATAATAATAAG
GAAGACTTTATTAAGATGATTGATACCGTTAGCTTCCACATACCTTTTTC
TTTAAACAGACCGTACATTTAGTAACCGCCTTGAAGATTATTGTGAGGCA
GGGGTTAACGTTTTCACGCTGGATCTTTGCCAAGAGGAGGAGATTCTCTA
TTAAAAAATCCCGTTCGACTGATCTTGCAAAAACTTCCTAATGAACTATT
ACGATTACCCCTTGTAGAAAATTGTTTGGAATGTATGCAAAAATTAACTT
TGAACTATTATTACAGCTTTAACATTTCTACCATCGTATTATAGACAACG
TCGGAGCTTTCGGATCGGTTAGATTTTCCACCGTCCTTTGGAGGAAGTCA
CGAGAACTTCAATACAATCAGTAAGTTTGCTTTAATACTTAGAATCGTTT
ATCTTTTACACCCCTGTATCATAAACTTAATATTCTCCAACCTGACTTCT
CACTCTATTCTTGTAATTTACCTTTTCTGTTACATAAATATATATCAACC
ACATTATGTCATTGAATAAAGCTGCATGACCTGAATAAACATGATGGGTT
CATTTTTAGTTAGAATCTATATTTCAATTCGTTGCTAGGTTCTAGAACTG
TAGTAATTTACGGACCTTTTGTTCGTCTTTAGGCGAGAATTCATTGTCAA
ATGTACCAAGTATTTTACGAAATGGCTCATTCCCGTTGACCATGAATGGA
AGGGGCAAGGTAAGAAAATCTTCATTGTTTTAATAACAAACTTTTGCCCT
CTGCTTATCTTAATAATTTCTTTAGGCAACTTAGCTTCGAACATCAAGGA
AGATTAAAATCCCTTTCAAGTGCATTCGAAAGTATTTTAATTTTGAAAGT
TTACTTTAGAAATCTTAGCTTCATTGAGAATTGGAGGGATCATTAATGCT
ATTATACATAGCTATCAATCTCACTACTAGCTTGATCACAAGGTCTTAAT
TATAGGATCGGTAATCGGTAATAATCTTTTTAAATCCGAGATTCGGAATC
TCATCAATATAACATCTTTACGCTTAAGTCGATTGTTTATTTCTTTTGGA
TAACGGGATCTTGAGAAAATTTTAATGGCGCAGGTTGAAAAATCAGTAGC
AATATCCTTAATGGTAAATGAGAAAAATATAAGATCACTTTTATTACGGA
AGGAATTACGTCCTAATACGTAAGTTCCTCTCGTCCAACACAGTTTTCTC
CAAACCCTTAATCTAATGTTGTTTTTTACAAATCATGCTGCTCTATAGAG
TTTCATCTAAATATGTTTTTATTAAGCTTTTATTCTGTGAGGTATTGGCA
TGTCAAACATGCGAGGATTACTAATACCCTCTATATGGGATCCTTTATCA
TTTATAGCTTCTTTTTTTAATTTTGTGCATTTTTTCTAAGATGCTTCTCT
GCCTCTCTTGACAACGCTGTAACTCTCTGATGAATGATTTTAGAAACTAA
GCGCTTTTCCTCAATATTCCAATTTTCCTGATTTTTGCCCTTGATATGTT
CCAAATCGTAATAAAGGTACTAAAACGTACAAACCATATTCTCGGGTACC
CAATAAGAAAGGGGGTTTAGAATAAGCGGGGTACGGAAAAATTCTCATAA
GCGGGTGGGGGGGGGGGTTGGAAAAAAAGGGGGGGAAAAAAATTTGAATA
GGGGGGGGGGGGGGGAAAAAATCCCAAAAGGGGGGGGGGGGGGGAAAAAA
TCCCAAAAGGGGGGGGGGGGGGGGGTTGGAATAAGAATGTACTGTATGGA
AAATTTTCAAAAAATTAATTAGCGCCCCACCCTGCTTATTAGGTACCCGA
GAGTAAGAACCGTATTTCCATACAAGTTACGAAGCCAAAAATAAGCATAC
TATAAACTTGCGTTTTTTGCTAAAGCTTTTGACTTTTCTCATTGGAGGTT
GACTGCCTCTATGATAAAAACATCCGCTATTCTAAAAAAAGTCAAACTGT
TTATACTAGAAGTTTTGCTTATAAAATCAAGAAAAACGTCTTTTTAGCTT
TTAGCTTGGGTCGATAGGTAAATTAGAAATCAAAACTCTTTTTTTTGATT
TTCGTTTCCAGTTGTCGGACATTTCTCCGCGGAACAACGATTTGGCACGC
CTTCATCACAACTCACTGTACCAACAAAACTCTTTGAATGAAGAAGAAAT
CAACGAAATTCGAGAAAAATTGAGCCGAAGTACAACTGGAGATGCCACCT
TGAGTGAAAGAGAAATTGCCGTACTTAAAGATATGTGCCATGTAAGATTT
TTTTTATTTTTATTTAACATATTAAATATGTAATAACTGTTGTTTGTATG
CTCGACTTTAGTCAAAGTCTTGTAGCAAGTCCTCAAAATTAAGGTTTTTA
GTTCAAGACACAGTTGCAGTTTATTCTGGCGAATTAAAACTCGAACGGGA
ATCTCGTTAAATTACGGAGAGATGCGAATTATAGCATTTTACGAAGATAT
CTCCTCGACGGGGACTGAAAATTAATTTGAATTAAAGAAAGATTCGAATA
AAAGAAGTTCGTATTAGCGAGAGTCCGTACTGTATATCATTTACCGGCTT
CACATATTTCTTACGTACTCTTTTATCACTGAGAGGAAGAGGAAAATTAT
TGCCAATAGCTCAGGATTTCCTCATGATAATTGTCTGTCGTTTGTCTCAA
ATTAAGCGGAGATGAAGCCAATTATTGGAACATGTTTATCCAAAGTATTC
GTTTGACATCATAAGTATCGCCTACTAAGCAAAGGAAGCTCAACTTTTTT
GAAATCGGAATTTTCATCCGGCGCTGGCCATTATGTTATTTTAAACAAAA
ACAATTATTTTCACGTTATCAAAGATTTCTTAGCTTTCTCGCCCTCGTTT
AGCTTAAAATCTGAACTATTTTAAGCATATTGGTTATATGCCAAACTTAC
TTATTTAGAAACCCAACTTGGAATTGTGTTCTCTTTTCATTTCAATAATC
ATCTTTTTTAACTTTTGCAGGTTGCATCGACACAATCGAAACTTCGATCC
AACAGTAATGCAAGTAACGCATCCAATTCAAGCTTAAACGCCTCCTTTGA
CCAATCGCCTTTATCACCGCCACCCGCCCTTAATGAGGTTCCGCTCTATA
AGCCCGCACCTCCTGCAGTTGCAACCAAACCTGCCATCCCTAGCAAACCT
GCAATGACTTCCTCTAAAGAAGATCTTCTTACTGAAGACAACCCACAACC
ACTGAATTCTGTTACTGAGTCAGCAGAAAGTAAGAAGCCACAACAGACTG
GACCACCACCACTGCCGAGCTATAACGAAATTATGAAAGATGTCGAAGAT
CGGACGCCTTCGACCGCCAAGGTTGAAGAGAAAGAAAGTGAAAGTGAAAC
TTGAATTTTTTACCAAAGCTGGGAGGAGAATATTTGGGCTTCATGTAGGA
TGATATACTGATCAAGTGCCTGTGATAGGAATAAAAAGGGAAGCAACTCG
CTTAATCAGGCTCAATCAATTCACTGATTGGTAAACTTTGATGGAATTGA
ATTCAATGTCTACCAAAGTGTGATAGAAATGTTGCGAAATGCTGCGGGTT
TGCTACATGCAAGTAAACACACTTCCATTTTTAAAGAATGTTATATGAAA
GCTTTGTTTAACGTAATGGCAAAACAAGACCATTGAGATTGGGACAAAAT
GCATCGACTGAAAATGGGTCAGTCTACACATAGCCTTACACGTTCAGTCG
GGATAAATTATTTTTTTCTACAATCTGATAGAACTACCTTACGTGCATTA
GTGGCATGGACAAAATTTTTTACATGTTCTTTTAACTATAGAGTGTCGTC
TGTTGCACTGTCATAATGTCGCTATATAAAGCAAATACAGCAGTGCTGTG
TTAGCTTTCAATCATGTAAGGATGACTTTAATCGTACTTACAAGAATTCG
TGAGTATCAATTTCTGGAATTAAAATGTATCTCTGTTGTATGAAATGAGT
TTTGCTAATGGATTCTGATTTGAGGTAATTGATACCCTTTTGATGTATAC
CGATGACAGTGGCTTTTATATATTTTCTTATTCTTTCTTTTCGTAGTAGA
ACTCTTTAGTATCGGTATTGTGTAACATTTTCTACTCTTACTAAACAGTA
TCAAGCTATACATTAGCTACGTGCTTCAAAAAATGCTTCAAAGTTCTGCT
ATAGTCTGCGGACCCTAATTAACATTTCTATCTAACTGACTGGCTGACTG
AATAAATGCACGGGGTAAATCACTTGGCCCCTAGTAGTTAGTTCATGTAA
TGTTTCCAGCTCACCCAATAAGAGACTTATACGCATGCGTAATTTGTCGT
TCTTTTAAACCACATGCAGTTAATTCCCGTGACAATCAAAGAGGGATGAA
TCTGTAGGCGTGTACAGTCACTTTCGGTCGGGGTTTTTTCGGGGAAATTT
GACGTTCTTTTTGTCACTTTTTAATAGTTATTTGTCGTTCTTTTTTTATG
GGTCTGGAAACGTTAGATGGACAGTCTCCTACGGCACACTTTGTGTGTTT
CTCAGTCTATAATCATTGAATTTTCTTACTGTAAAAACTTTGTTTGATTT
TGCTACTATGAAAATTATATTTTGGATAGGTAAGGAAGACTCGTGTTTAC
TATTTATAAATTAAAATTTATACCACATTAATTGTACATATTTAAAAAAT
CATTAATAAGAAGATGAATGAAACAGAGTTGCCTTAGTA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00047921-exon-scaffold_139-1575043694:450686..451697 | TCONS_00047921-exon-scaffold_139-1575043694:450686..451697 | Clytia hemisphaerica | exon |
| TCONS_00047921-exon-scaffold_139-1575043694:449833..449915 | TCONS_00047921-exon-scaffold_139-1575043694:449833..449915 | Clytia hemisphaerica | exon |
| TCONS_00047921-exon-scaffold_139-1575043694:449581..449661 | TCONS_00047921-exon-scaffold_139-1575043694:449581..449661 | Clytia hemisphaerica | exon |
| TCONS_00047921-exon-scaffold_139-1575043694:448328..448403 | TCONS_00047921-exon-scaffold_139-1575043694:448328..448403 | Clytia hemisphaerica | exon |
| TCONS_00047921-exon-scaffold_139-1575043694:446457..446636 | TCONS_00047921-exon-scaffold_139-1575043694:446457..446636 | Clytia hemisphaerica | exon |
| TCONS_00047921-exon-scaffold_139-1575043694:444009..445727 | TCONS_00047921-exon-scaffold_139-1575043694:444009..445727 | Clytia hemisphaerica | exon |
| TCONS_00047921-exon-scaffold_139-1510915933:450686..451697 | TCONS_00047921-exon-scaffold_139-1510915933:450686..451697 | Clytia hemisphaerica | exon |
| TCONS_00047921-exon-scaffold_139-1510915933:449833..449915 | TCONS_00047921-exon-scaffold_139-1510915933:449833..449915 | Clytia hemisphaerica | exon |
| TCONS_00047921-exon-scaffold_139-1510915933:449581..449661 | TCONS_00047921-exon-scaffold_139-1510915933:449581..449661 | Clytia hemisphaerica | exon |
| TCONS_00047921-exon-scaffold_139-1510915933:448328..448403 | TCONS_00047921-exon-scaffold_139-1510915933:448328..448403 | Clytia hemisphaerica | exon |
| TCONS_00047921-exon-scaffold_139-1510915933:446457..446636 | TCONS_00047921-exon-scaffold_139-1510915933:446457..446636 | Clytia hemisphaerica | exon |
| TCONS_00047921-exon-scaffold_139-1510915933:444009..445727 | TCONS_00047921-exon-scaffold_139-1510915933:444009..445727 | Clytia hemisphaerica | exon |
| TCONS_00047921-exon-scaffold_139-1491911889:450686..451697 | TCONS_00047921-exon-scaffold_139-1491911889:450686..451697 | Clytia hemisphaerica | exon |
| TCONS_00047921-exon-scaffold_139-1491911889:449833..449915 | TCONS_00047921-exon-scaffold_139-1491911889:449833..449915 | Clytia hemisphaerica | exon |
| TCONS_00047921-exon-scaffold_139-1491911889:449581..449661 | TCONS_00047921-exon-scaffold_139-1491911889:449581..449661 | Clytia hemisphaerica | exon |
| TCONS_00047921-exon-scaffold_139-1491911889:448328..448403 | TCONS_00047921-exon-scaffold_139-1491911889:448328..448403 | Clytia hemisphaerica | exon |
| TCONS_00047921-exon-scaffold_139-1491911889:446457..446636 | TCONS_00047921-exon-scaffold_139-1491911889:446457..446636 | Clytia hemisphaerica | exon |
| TCONS_00047921-exon-scaffold_139-1491911889:444009..445727 | TCONS_00047921-exon-scaffold_139-1491911889:444009..445727 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_139 | supercontig | scaffold_139:444009..451697 - |
Blast
BLAST of TCONS_00047921 vs. Swiss-Prot (Human)
Match: CC85A (Coiled-coil domain-containing protein 85A OS=Homo sapiens GN=CCDC85A PE=2 SV=3) HSP 1 Score: 137.887 bits (346), Expect = 7.998e-34 Identity = 64/141 (45.39%), Postives = 105/141 (74.47%), Query Frame = 1
Query: 532 IRSLESEKLTIMIEHNNLIKEFNKRMESHMEEIRSLKDSNIQYETELKDLQELSVFLDDDRKKCRKLAKEWQRFGRHTVAVMRAEMQGYQDKIKNLEIKQQKLVKENTELRDLCVYLDQQRSGAGIDGQSNGLN--YSVCQ 948
+R E+EK++ M++H+NLI+E N+R++ H+ EIR LKD N + + + ++L++L FLDDDR+K +++++EWQR GR+T VM E+ Y K+K+LE+KQ+++VKEN EL++LCV LD+++ GAG G ++ S+CQ
Sbjct: 56 LRRAEAEKVSAMLDHSNLIREVNRRLQLHLGEIRGLKDINQKLQEDNQELRDLCCFLDDDRQKGKRVSREWQRLGRYTAGVMHKEVALYLQKLKDLEVKQEEVVKENMELKELCVLLDEEK-GAGCAGSRCSIDSQASLCQ 195
The following BLAST results are available for this feature:
|
