TCONS_00047989 (transcript) - C. hemisphaerica

Overview
NameTCONS_00047989
Unique NameTCONS_00047989
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length953

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00047989 ID=TCONS_00047989|Name=TCONS_00047989|organism=Clytia hemisphaerica|type=transcript|length=953bp
GGGATTATCATATCCAAACGACCAATATCGGGCATTCTTTCCCCGATTGT
GTCGACTACCACAAGATTAGTAAAACGCAAGAATGTACTGAAGGCTTTCA
AAGATTCACTTATGTTGATTGGTTTTATGATACTATTCATTTTTGCTCTA
TGTGTCCATCTGGAACTTTCTGGAATAATGCAACGCGAACTTGCAAGCAA
TGCATTGTGGGCGAATACCAGGATGACCATGGTATGAGCACGTGTGAGAC
TTGTCCCTTGGAGAAATCTACTTTAAAGACTGGATCAAAATCTATCAAAG
ACTGTTATAACCAATGTTTGCCAGGCAGTTATTCATCCACCGGGTTAGAC
CTTGCCAACGAAAAATGTGCACTGTGTCCTAAGGGAACTTTCTCATATCT
TCATGGATCAACAGAATGTACTGTTTGTCCTGGACAATCAACAACAGATA
AAGAAGGAACTGCATTGGAGTCTAAATGTACAGCTTCACTCTCCATCGTT
GGAATTTTACCGCTTGGTCCAAACGTCTCTGTCAAAAGGAATTTCGAATT
ACGTTTATCGTGTTATTTTGAAGGCTCGCCTGTTCCTGATGCAACGTGGC
TCAAAGAAGGAGGCAATTTACCAAATTCTCACCGTCTCGAAGAATTATTT
GATATGCATCTAATCAAGATTGGAATTTCATTAGTTGTACCTTCAGTTAG
TACTCGCGACGCTGGAAAATACACGTGcattgtcaaaaataaaaatggca
ACGACCATCGGGCCGTCAATGTCAAAGTTGTTTAAGACGTCACAACGGCT
GCCGGGCCGTTCAGTTGATCATTCACACAGATTGTTGGGCCGCTGAATTT
GTTGGCACAATCATTTctgtgttttatttttacaaaacacATATTTTATT
TCCTTTATGTAATTTATATGGGTGGGGTAAATTGGAAAAATATAATTATC
GTG
Run BLAST on NCBI

transcript from alignment at scaffold_14:299788..309368+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00047989 ID=TCONS_00047989|Name=TCONS_00047989|organism=Clytia hemisphaerica|type=transcript|length=9581bp|location=Sequence derived from alignment at scaffold_14:299788..309368+ (Clytia hemisphaerica)
GGGATTATCATATCCAAACGACCAATATCGGGCATTCTTTCCCCGATTGT
GTCGGTGAGTATTCCTTTGGTCTTTGGAAATCAGGTTCTTAATCTAGGAA
TATCGGGGAAAATCAGATTAAGGTGTTCGGATTAAGGTATGGTGATTATC
ATGTCCAAACGACAAATATCGGGTATTCTTTCCCCAATTGTGGCATTCTT
AGTTTTTGtttccaaattccatgatgtcggtattcttagtatattcttaa
tgttttagccaaattcatcatgaatatttttataaagtatattcttataa
tagAAAAGCGTGTATGTAGTTATATCAATTTCAAATAaccttttttgttt
atattccAGACTACCACAAGATTAGTAAAACGCAAGAATGTACTGAAGGC
TTTCAAAGATTCACTTATGTTGATTGGTTTTATGATACTATTCATTTTTG
CTGTAAGTATAAACTCATGATTCTGGTATTCAAATCAAAGACAATCCTTG
GTTATCCTTTAGACAAATCAAGAACAAAACAAATAAGTACACTTTGGGAG
CAAAAATCCCTGGATATCAGGGATAAATTGGAATGTACCGGAATTGTACT
TGATTAAGAAAAATCCATCCAAAGTTGTCCTTGATTGTCTGATTGTACTT
ATTTAGATTTTACAAGATTAGGCTGCTCCAGATTGTCCATAGTTCACacc
taatttttttcattactcttaaaaatttatgtttaaTCAAGTACACCCTG
GTTGTCCATAGTGTACTTAGTTTTGTCCTTGATTTGAATGCAAGGGTAGT
TTTTCATAATAAACTGATCATTTTTTCGCCTTCTGATCTCCGTGGCTAAT
ATAACTAAACACTCCCTTcttacagacccactgggaccccttcccactgg
aagaattggccaaaatatcgtccctgtggaaaattatcctccaatgcttg
tccccactgaaaataatcaaataaaccaatcctcactgtaaaatatCATG
CTAATTCTCCCATCCCCAGTGAATTGTctgactttaaaacaaaataattg
gaatccccagccatagagaatatggaaatatcaatccctatCGAGTTTAA
GCCCTTTGTTTCTATCCCCCACTGGATGACAAAATCctatcgggtctgtg
agaagggggtgtaactAAGAGGTCTACTATATAGCTACATCATATCATTC
GTGATATGATAAtatacgagttgcgagttacgagttacgagttacgagtt
gcatttagaaacacgagttgcgagttactttttacgagttacgagttacg
agttgcattttaacaaaataaaatcgcgagttacaagttacgagttgcat
tttaactcacaaaattcgcgagttgcaaattgaaagtgcgagttgcaaat
taaaagtgcgagttgcaaattaaaagtgcgagttNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNGATTAAATTATTATTGCTGCTCACTATTATACATAAGAAGAGC
AAATATTTggtggagaaagaaaaaaaatgtacaaaaagtatTTACATTNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNATTAGcccaaaaacgactttctcgcccgaattccaaattt
tgaaaaacgaggaaataagctaaattctcaatatattttggccagGATTG
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACCTACAGTAATTAT
AAGATCACATGCAAAAcgtgtacaatcatggtcgtaatattttagaaaaa
agggaaattcccacgaattttcaaaactaaaaacgATTTAGAAGTGCTCT
AAGTTAGGTTGGAaggatagagttttaactctgagttttaacgctagact
taagactttaggatctgaggatccaaaagttcaaaaatggtccaatacgA
GGTCCAATACGaatcagaatatagcctggaaatcTATAAACCcatgccaa
attgaaatatccgattaaatttaagaAAGGCCCAAaatctcgcccgaact
ccaaattttgaaaaacaaggaaataagctaaattctcaatagatttttaa
catgatTGTAGAACAGCCATTTGAAAGCTNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNGAATAGGTTGTcgatttctatccttttgt
gtTATCAGCATCAAATTTATAAGTGACAAAACCCCAAATCAGTCCTTCGT
AGAGTgcctttttcgaaaattttgggggaaaagtagaaaattttagaaaa
ttttggattttcagtTCCAATCAGGGTCActcttttcgcaaatttcggca
aaatttttgaaaaaacgagtcccatgtAGAGTCATATTTtggaacctcag
cggagcatccccgtcggtcggcaagggtaggaCCCCCGGGACAAAACCTT
TGTTTGCTGGGATTGttaaagaagctttatatttgaccatcagatcatta
tttcataaaaataagtgattttatCAACATAAGGACAagagaataattga
ttagaattgtatctctaaaactgccctTCCCAANtaaaatatttggtgta
ataaagctTGCAGGTATCACACTTAAGTAGCCTGtcaataattttgtcaa
aaagtgtcactttgtcttgAAAATGACAGGTAACGTCTTCGTTATTAAAA
GTAACATTAATGTTTCTCGATAGGAAGAAACACGCGCATTtcctttcaaa
acttaaagttatgtaatgctctgttttgttttcatacaaaaatgAGCGAA
AAAATGTGTGATTTGAGTGGTTTCACAACTTTAATCGTAAAACGTAAACA
GTTTTCCATGCTTTGCTTTgggtttagctttttttgtgctgttattattt
tatttaagataacaatctcagacttgattttaatttgcaactcgaaCTTT
TAATTTGCAGCTCGCACTTTTAATATGCAACTCGCACTTAATATGGAACN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNatttgcaactcgcgaattttgtgtgttaagatgcaactcgtaac
tcgcaactcgcgattttattttgttaaaatgcaactcgtaactcgtaaaa
agtaaaaagtaactcgtaactcgtaacttgtaactcgtaactcgcatatG
AAAAATCCTCTATCATTCtccgtttcgagcgtaaaactcctactcttcgg
gatatgagcactgctcttgaatattgaaattctccggataaatcgcatgc
ACACTGAGGTTtgaacctaagccaatcagctgtgttttaaacattctttt
gtttgaaatctctattgataaacatcttttgagaaagttgtctattatgt
ttaaacctattaataagcaattcccggtgggggttactaggggaattttt
tgtgcaatgcatcatgggtaatcattcggggagaattcggaaagccgttA
TCGTCTATTGTGAAATCCCCTTCAAAAAGTAATTCGATTTcttgcaaaaa
ttttcatgatatagcaatcaatagaccttttcataaattacgtcacgaac
tcACTTGCTTCGTTTTGAACATATTGGTCGTGTTCAGacatgaaagttta
agtttaaggcgtaagtagtactaagttgatgttgatatgggaattaagaa
atgcaacgacttaattgctatttcatcttttagatggattacataagaga
ggaaaaaggaatccccttttgaaTGTTTGAGTGAGGCTTCGCTTTTGATA
GAGGAGATTGCAAACAGTTTTGTTGCAGAGTATGGGAATCTCCATACTTC
GATCCatgatattctcattaaaagccCATTAGCTGCCTAAATTCTAGAGa
cgctccgagcgtctctaagtcataaatttcacgttctcctttcataattt
acaaaaggaacatgcttttcacttgcgaactctgatttcgtctattcaga
aaactgtgataatatcgtaaaaactttttttttaaaccagagggtgattc
ctttttaaactttggtttaacttatGAGGAGTCTGCagctaaatacaaaa
ggaatataaaagaaacatgtagacttaattactttaaaccttggtctgaa
cacgaccattACCACGGTGATTAActtcccagcggattttattaaaaata
ttttctatttataaaaaatcatttaatgtctcaagggatatgatcaccat
ggaaattgttcgaatacgaggcaagtgatgttcgtgacgtttttaatgaa
aaggtctatttcttGCAAAGATTTTAATAATATAGCAATCAATTCTAACA
ATTTTAGGGACAAAAACTGGCTCATTTACCTACTTTGAGTAAAGCTAGAA
ATACTTTCAAATTTCTAATCAATCAGTTTTTCTATATCTTTTGCTAAATA
TGATTTGATTTGGTTAAGAACACATCACATGGCTTTTAttcccagttggc
acacaacgttttttcaacgtttatctaatgttcacaacgtccatataacg
ttacattaacgttgaaacaacgttgtgtgccaactgggttTATGTTTTAC
TTTCATCTTAGCTATGTGTCCATCTGGAACTTTCTGGAATAATGCAACGC
GAACTTGCAAGCAATGCATTGTGGGCGAATACCAGGATGACCATGGTATG
AGCACGTGTGAGACTTGTCCCTTGGAGAAATCTACTTTAAAGACTGGATC
AAAATCTATCAAAGACTGTTATAGTGAGTACAAAAAATTCGTTAGTGAAT
GAGTTTGCTTTCCCCATGGGTTGAGCAAGTTTGAGACTTGTCCCTTGGAG
AAATCTACTTTAAAGACCGGAACAAAATCTGTCAAAGACTGctatagtaa
gtgaaaagaaTCTGTTAGGGAATGAGTCAGTAAAATACACCACTACAAGA
AGATTTCGGACAGTCAACAAGTAAATATGGAAAACTTTAGACATTGTACA
CGATAATAAGTTTACACGTGCCTCTCCGACTGTCATAGTTGATCTCCCCC
AGCTCCTGGACTATTAGTGAATGAGTTTNCGTGCCTCTCCGACTGTCATA
GTTGATCTCCCCCAGCTCCAGGACTATTAGTGAATGAGTTTGTTTTCCTT
ATCGATTGAGGTCATTAAGCACGTCTTTGAACCTTGGTTATCGATTAAAT
CTACCCCATAACTACCCTCATCTGTCAAAGAAGGCTATTATTAGTAAACA
ACTGCATCTCTTACAACCTCTCTCTTGTTCAAGATTAAGACTTTTCAAAT
TAAGAATTTGGTCACAACTTCATTGAGTTTGTGACACTCAAACACCCAAA
AGAGAAACAACGCTATAAGAGCTGGCATTTACGATAACTCGGTTTTAAAA
ATAGATCTATTTTCAATCCCTTGTTCAAGAATGTAGCTTGGCTGCTAGAT
GTCTCGACCACTTTAGATATGCCCAAGTTCAGGAATTTCCGTTGTTGAGG
ACGGCGGTGTGACTGAAGAGATTTGGAAGAACCCGCATTTCTGACCCGAA
AAATCGAGGAcgataaaattgttaatttatcGTCCTTTTTTGTTGATCGG
GATCTAGAGAAATGAGAACTTTACCGTCCCTGTcgcaaaaaaaaacacat
acgcaaatacataaacttcgCTATTCCTTTCAAGATTCAACTCCAAATAG
AACTTAGCCTAGGAATCCAAGTGGTAACTTTGTTCGTGGTCTTTTCCttt
taattctaaaattttgagcttggattcccaggctaaataGTATTCATTAA
CTGTCAATCTTCTGCCAAGAGCCatttgaacaacttttttgattttaccg
TTTAACATATGACTCAATGGTGAGCACACTGatctttatatatccctgga
ccaagctatatccgtcatctttgattgaagtttttattgaaatcggtacc
cgagaagaagccattgtagtgtttgaaactttgcctagCGACAAACGGCG
TTACATCATTAGCGTTCAAGCAAAactagacctagcgctctctccgcggg
taccaatttaaaaaaaactccaatcaaaatattttgcttggccggtattg
agtaacttggtccagggatatataaaggtcagtgggtgaGCACCTGTCAG
AATCAGATTTATTGatggtttcattttttatctacaGACCAATGTTTGCC
AGGCAGTTATTCATCCACCGGGTTAGACCTTGCCAACGAAAAATGTGCAC
TGTGTCCTAAGGGAACTTTCTCATATCTTCATGGATCAACAGAATGTACT
GTTTGTCCTGGACAATCAACAACAGATAAAGAAGGAACTGCATTGGAGTC
TAAATGTACAGGTTAGTGagtttctattcatgatatgcaccattgcaatg
tcttctggcataacatcacggacccaatagctgaatggttgcaagtgacg
taaaattaatcagtacgtcactttcaaccaatcatctgttggatccgtgg
aagacattgcaatggtgcatatcatgaatttataTTTGATTGAGTTGAGT
TGCAGCACTGCAATGTCTACTAGAATCAATGTCTTCGACATCACATCATA
GACCCAGCACCTATCCTCGTCTTAACCTGCATCGAGTTCCTCAGCACCTA
TCgatccgtgatgtaatgttagaagacattgcaatggtctATATCATGAA
TNacgaccaatcagctgttggatccgtgatgtaatgttagaagacattgc
aatggtccATATCATGAAATAGGTTGAGTTGCAGCTGGTTTTGAGGCCAA
TTTTCCCACCTATAAACGCTCATTTTTTTCGActgagaaaattagttccc
tttaaGGTATTGTAAGCATTGTCTTGTTTACCCAGGTTTGACAAACCGAT
AAGCTTTTTAATATAGAATTCTTTGAATTTTCGTTCTTCCCATAGCTTCA
CTCTCCATCGTTGGAATTTTACCGCTTGGTCCAAACGTCTCTGTCAAAAG
GAATTTCGAATTACGTTTATCGTGTTATTTTGAAGGCTCGCCTGTTCCTG
ATGCAACGTGGCTCAAAGAAGGAGGTATAATTTACAGACCCAgatagaca
gacagacagacagacagacagacacatagacagacagacagacttATAAA
CCACCCTAACTGTTTGAGTGttttcatacacgttttttataagaacatcc
aaaatttttgaagcctttgaaaaatgttttatttcagtcctaaaaatgtt
cttagcatgttcttattttcaccatttttcgagcaattttgtccattttc
caaagaaattgggtgttctaGAGTCCCCAAAactgttcttagcttgttct
taacattttggccatcaagcCATATGttgttatatagtttgttcttataa
aaagaaaacgtgtaatcTCTTAAATATTGATTCTAGGAAATTTGCCCCGA
GTAATTTCCCCTTTGGAAAATTGCCCTCCTCTGTTTTTTTTGCTCGCTCC
TCCAGACAATTACCCAGACTCTCAGAGTTTATGATTTTCCTTCGGTACTA
ACAGAAGACTTCATTGATACTATAGAATCTTTCTTTTCAGGCAATTTACC
AAATTCTCACCGTCTCGAAGAATTATTTGATATGCATCTAATCAAGATTG
GAATTTCATTAGTTGTACCTTCAGTTAGTACTCGCGACGCTGGAAAATAC
ACGTGcattgtcaaaaataaaaatggcaACGACCATCGGGCCGTCAATGT
CAAAGTTGTTTAAGACGTCACAACGGCTGCCGGGCCGTTCAGTTGATCAT
TCACACAGATTGTTGGGCCGCTGAATTTGTTGGCACAATCATTTctgtgt
tttatttttacaaaacacATATTTTATTTCCTTTATGTAATTTATATGGG
TGGGGTAAATTGGAAAAATATAATTATCGTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_030542XLOC_030542Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00047989-exon-scaffold_14-1491911889:299788..299841TCONS_00047989-exon-scaffold_14-1491911889:299788..299841Clytia hemisphaericaexon
TCONS_00047989-exon-scaffold_14-1510915933:299788..299841TCONS_00047989-exon-scaffold_14-1510915933:299788..299841Clytia hemisphaericaexon
TCONS_00047989-exon-scaffold_14-1575043694:299788..299841TCONS_00047989-exon-scaffold_14-1575043694:299788..299841Clytia hemisphaericaexon
TCONS_00047989-exon-scaffold_14-1491911889:300147..300239TCONS_00047989-exon-scaffold_14-1491911889:300147..300239Clytia hemisphaericaexon
TCONS_00047989-exon-scaffold_14-1510915933:300147..300239TCONS_00047989-exon-scaffold_14-1510915933:300147..300239Clytia hemisphaericaexon
TCONS_00047989-exon-scaffold_14-1575043694:300147..300239TCONS_00047989-exon-scaffold_14-1575043694:300147..300239Clytia hemisphaericaexon
TCONS_00047989-exon-scaffold_14-1491911889:306049..306210TCONS_00047989-exon-scaffold_14-1491911889:306049..306210Clytia hemisphaericaexon
TCONS_00047989-exon-scaffold_14-1510915933:306049..306210TCONS_00047989-exon-scaffold_14-1510915933:306049..306210Clytia hemisphaericaexon
TCONS_00047989-exon-scaffold_14-1575043694:306049..306210TCONS_00047989-exon-scaffold_14-1575043694:306049..306210Clytia hemisphaericaexon
TCONS_00047989-exon-scaffold_14-1491911889:307625..307798TCONS_00047989-exon-scaffold_14-1491911889:307625..307798Clytia hemisphaericaexon
TCONS_00047989-exon-scaffold_14-1510915933:307625..307798TCONS_00047989-exon-scaffold_14-1510915933:307625..307798Clytia hemisphaericaexon
TCONS_00047989-exon-scaffold_14-1575043694:307625..307798TCONS_00047989-exon-scaffold_14-1575043694:307625..307798Clytia hemisphaericaexon
TCONS_00047989-exon-scaffold_14-1491911889:308383..308511TCONS_00047989-exon-scaffold_14-1491911889:308383..308511Clytia hemisphaericaexon
TCONS_00047989-exon-scaffold_14-1510915933:308383..308511TCONS_00047989-exon-scaffold_14-1510915933:308383..308511Clytia hemisphaericaexon
TCONS_00047989-exon-scaffold_14-1575043694:308383..308511TCONS_00047989-exon-scaffold_14-1575043694:308383..308511Clytia hemisphaericaexon
TCONS_00047989-exon-scaffold_14-1491911889:309028..309368TCONS_00047989-exon-scaffold_14-1491911889:309028..309368Clytia hemisphaericaexon
TCONS_00047989-exon-scaffold_14-1510915933:309028..309368TCONS_00047989-exon-scaffold_14-1510915933:309028..309368Clytia hemisphaericaexon
TCONS_00047989-exon-scaffold_14-1575043694:309028..309368TCONS_00047989-exon-scaffold_14-1575043694:309028..309368Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_14supercontigscaffold_14:299788..309368 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0.0226818	0	0.12682	0	0	0	0	0.655993	0	0	0.325149	1.8732	0.33892	0.35472	0.46717	0.0885962	12.4503	5.3454	0	0	3.89756	1.44659	1.05559	3.48966	0	0.345627	1.70028	0.673632
Blast
[Close]
BLAST of TCONS_00047989 vs. Swiss-Prot (Human)
Match: SVEP1 (Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1 OS=Homo sapiens GN=SVEP1 PE=1 SV=3)

HSP 1 Score: 80.8777 bits (198), Expect = 1.201e-16
Identity = 49/133 (36.84%), Postives = 64/133 (48.12%), Query Frame = 3 
Query:  138 HFCSMCPSGTFWNNATRTCKQCIVGEYQDDHGMSTCETCPLEKSTLKTGSKSIKDCYNQCLPGSYSSTGLDLANEKCALCPKGTFSYLHGSTECTVCPGQSTTDKEGTALESKC-----TASLSIVGILPLGP 521
              C  CP GT++N    TC+ C +G YQD+ G   C+ CP    T    S++I DC  QC  G+YS +GL    E C  CP GT+    GS  C  CP  ++T K G    S C         S  G++P  P
Sbjct:  997 RMCVNCPLGTYYNLEHFTCESCRIGSYQDEEGQLECKLCPSGMYTEYIHSRNISDCKAQCKQGTYSYSGL----ETCESCPLGTYQPKFGSRSCLSCPENTSTVKRGAVNISACGVPCPEGKFSRSGLMPCHP 1125
The following BLAST results are available for this feature:
BLAST of TCONS_00047989 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SVEP11.201e-1636.84Sushi, von Willebrand factor type A, EGF and pentr... [more]
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