TCONS_00047996 (transcript) - C. hemisphaerica

Overview
NameTCONS_00047996
Unique NameTCONS_00047996
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2176

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00047996 ID=TCONS_00047996|Name=TCONS_00047996|organism=Clytia hemisphaerica|type=transcript|length=2176bp
GCTTTTGCACCTGGTCCCGGCACAGGTGTGATTGGTAGCATCCTAGGTGG
GTTACTCGGTGGCCCACCTGTCGCCTCCCCTGCTGGTTACCTTGCAATGA
AACCACATGGACCTATGGATGTGTCACCAATGGCTGGCCCAATGGCGCCA
GCTTTAGGTGCAGGGATAGCAGCTGGTCTTGCGGGAGGACCTGGTGCAAT
GCCATTTGGTGTTCATGGTAACTTGGAGGGAGCTCTACACTCTCATGGAA
TTCCTCCTGGCCTGGCTGGTATCATGGGAATTTCAGgtttcgGTGGTGAC
CTGAAGAATAAGATGGACCATTTGATGACCGGTGGTGGAGGAAGTTGGTC
ATTAGGAGGTCTTGGCAAGTTCGGTATGGGAGCTGGTGGAATAGGAGGCT
TTGGAGGTGCTTATCATGCTATGACAGGTTTGACCAGAAGTTTACAAGAT
AATCAACAACCTCTTCCAACACAAAACGTGAAAGCTGAACCAAAGAATGT
CGTTTCAAATTTAGATgaacttttcaaatttatcaataAAGCTGGTATTA
TAGGACCACCCCCTGACGAACAAGATACCAGACAGCACTTTCTGAAACCT
AACACCATGGTAACTCCGGATGATCCAGAAGCTCTGGAAAACTTCGTCAA
AACAAAAGTCAAGGATAAAGATACCAAGAAACTTCGTCAAGAAATCAATG
AACTTTTTCAACCTCCTAGACCTGCTCCTGCAAAATCACTCACTTCTTCT
AAAGCTAATGCCACGCTGACTCATAATGAATCTAGCGCTACCGCTGTTGG
AGATGATAAACAGACTGTGTCAACTGCAAACAGTGCAGACCAACCTTTAA
ATGATAATGTAAATGGAGCCTTAAGTGAACAACACCCTACCGTAAATCAA
AACGAACTAAAGAATATGTTCAGCAACATGCTTGGATTGCAGCAACCGCA
ACCAACCAATCAAGAACAAGCATctcaaaaatcaaccaatgagattCCAG
CCTCTTCACAAACAGCCAATCAATTCGCGACAAGTAGCGTGTCTACGTCA
TCAAACACAGCACAAGATCCAAACGCGTTACCTAATGATTTCGCTAAACT
TTTAGCCAATGCTGGTGCACataatcttttacaaagcttacaacaacaac
aagctgATACGAGGTCAACACAAAATACGTTACAAAACTCTTTAAGTGGC
TTAGATACTCAAGCATTGACGAGACAACTTTACAACAATGGATGGATGAA
CCCAACCAATAATATTCAGAATAATTTACAAAACAATCCTGTCTCCGAAT
ACATAACACGTGCTTTAGCAAGCTCAGCTCAGTCAGCTGCAAAACGCGGG
CAAGTGTTAAATTATCAACCCAAGACGCGGGTTGAAGACTACCAAAACGC
GTTTGtccgaaatttttttaaatctgcaCATGCGCACGAGGTTATCAAGC
CTGTACGACGTGAGGAGTTGAGTAAACGAGGAAACTCAGATAGATTTACG
GGTGTCAAGATCAAAGTTCTTGAAAGGAGACGATCTAATATTGCTAATCA
AATTCGAAACTTGCGAAGACATGAAATATTAAATCAGTTGAAAACATTGG
ATGTGGTTGGTACCAAGCGAAATGTCCCTAACTGGCGCGATAGAGATGGT
TCCATTGAAGCCAAAGAAGAAATGCATGATgctcatgatgaaatggatga
tgatggtgatgaaaaatttgaagaagctTTCCTCAGGAAGAAAGACCATT
CACAAGACCAAAGGGATAATGAAGAAGAGAGAGGACGTCATTTCGAAGAG
AAGTCAGAAGTGCGGGATGACGAAGCGACGAGGAGACATGATATGGATAA
TCCTGTTGATTTGTTGgcttttgaagaaagaaaagcGGATAGGGGAACTG
GTAATGGTAACAAACGGAGCAAGAAAGAGGAAGACAACAGTGACGATGGA
GATGCAGACAACAAAGATTCGGTTGATAACGATGCAGATGTCACCTGGCG
AAGACAAGCAAAGAAAGCAGCCAGAGCCCACAGACGGTATGGTTTAGAAG
ACGAGGAACACCACCATAACGCTACATTTGAACACAGTCTGACGGAGAAA
CTTCTAGATGCTGTTCTCAGTGATAAGATAGGCCACAAAGATGAGCATGG
TCATGAAGTGAATTTAgCTGCTACCG
Run BLAST on NCBI

transcript from alignment at scaffold_14:337911..353642+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00047996 ID=TCONS_00047996|Name=TCONS_00047996|organism=Clytia hemisphaerica|type=transcript|length=15732bp|location=Sequence derived from alignment at scaffold_14:337911..353642+ (Clytia hemisphaerica)
GCTTTTGCACCTGGTCCCGGCACAGGTGTGATTGGTAGCATCCTAGGTGG
GTTACTCGGTGGCCCACCTGTCGCCTCCCCTGCTGGTTACCTTGCAATGA
AACCACATGGACCTATGGATGTGTCACCAATGGCTGGCCCAATGGCGCCA
GCTTTAGGTGCAGGGATAGCAGCTGGTCTTGCGGGAGGACCTGGTGCAAT
GCCATTTGGTGTTCATGGTAACTTGGAGGGAGCTCTACACTCTCATGGAA
TTCCTCCTGGCCTGGCTGGTATCATGGGAATTTCAGGTACGAAAATTATT
ATGCAATTTTAGAGACTGTTAAActaacgtttccagaccatctgtaaaaa
ctccagctcatcctaAGTCAATTGAATAATGATGAGAAATCAATTTgagc
atttttctttttgtttggataaaattggataaaaaataGCATGTAACTTA
TACACGAAttctatgaaataggctaattaaGAAACAGTAATAAGGGGGGG
GGTTGTGTTTTTACGGTCTGACGGGACTGGCCCtattttagtacggtatt
acggggtTTGACAAAAATGAGACGGGAAAACGATATTTTAAAAttagacg
gtgacggtattatACCGGTACCTTTACAAACCGGTGTAATGGTGTTatta
tgtttttcaatttttgggattccgggattcagcaaagattatgacgggaa
aacggtattttgaaGAGTAAATTAGCATCAACCTTTTTTTtccaactttt
tcaaaaggtttcgGTGGTGACCTGAAGAATAAGATGGACCATTTGATGAC
CGGTGGTGGAGGAAGTTGGTCATTAGGAGGTCTTGGCAAGTTCGGTATGG
GAGCTGGTGGAATAGGAGGCTTTGGAGGTGCTTATCATGCTATGACAGGT
ATGTGTTACATTAAGGGCAGAAACCTTCGCGGTTATTCCCCTTTTTATCG
CAAAAGTTTCCGCCAAGTAAGAAATTACACGAGAAAAGTACACTTTCTTG
CCTATTTTATACACAGTTTTCAGTGTTTGTGCATTTTTATCGCTTTTTTG
CCACTGGTGATTTATATCATGAAGGAAGGAAATTCTGAGCATCGGAATGT
GATGGAAGGAACGATGGCCGAAATGGTCAAGATATGTCCAGCCCCTCAAA
CCAGTTGctcatagctccttccaatgttccttTAAGGTGTTACAAGAAGG
CTGGCTACAGACCTcgtaaaaacaaatgaaaacattgACTTTAACAAGCT
ACtgtattttaatttcattttactcATTtcagtctccataactcgaacac
gcacggggaacaaagatttgttcgagttaaggaaattttgagttatgtaG
TAAGGTTTATAAAACATTGTTAGCTGAAGGGACTaagaaacttgttcgag
ttaagaagacattcgagttatagaggttcgaattaaagagactctactat
ACATTTTGTTCGGTATTACAGGTTTGACCAGAAGTTTACAAGATAATCAG
CAACCTGTTCCAACACAAAACGTAAAAGCTGAACCAAAGAATGTCGTTTC
AAATTTAGATgaacttttcaaatttatcaataAAGCTGGTATTATAGGAC
CACCCCCTGACGAACANCGTGTTACATTAAGGGCAGAAACCTTCGCGGTT
ATTCCCCTTTTTATCGCAAAAGTTTCCGCCAAGTAAGAAATTACACGAGA
AAAGTACACTTTCTTGCCTATTTTATACACAGTTTTCAGTGTTTGTGCAT
TTTTATCGCTTTTTTGCCACTGGTGATTTATATCATGAAGGAAGGAAATT
CTGAGCATCGGAATGTGATGGAAGGAACGATGGCCGAAATGGTCAAGATA
TGTCCAGCCCCTCAAACCAGTTGctcatagctccttccaatgttccttTA
AGGTGTTACAAGAAGGCTGGCTACAGACCTcgtaaaaacaaatgaaaaca
ttgACTTTAACAAGCTACtgtattttaatttcattttactcATTtcagtc
tccataactcgaacacgcacggggaacaaagatttgttcgagttaaggaa
attttgagttatgtaGTAAGGTTTATAAAACATTGTTAGCTGAAGGGACT
AAGAAACGagttaagaagacattcgagttatagaggttcgaattaaagag
actctactatACATTTTGTTCGCTATTACAGGTTTGACCAGAAGTTTACA
AGATAATCAACAACCTCTTCCAACACAAAACGTGAAAGCTGAACCAAAGA
ATGTCGTTTCAAATTTAGATgaacttttcaaatttatcaataAAGCTGGT
ATTATAGGACCACCCCCTGACGAACAAGATACCAGACAGGTTCGTTGTTT
CTTCTTTGCtcagagagacttttttgaaaaattgtcttcaaattttgaag
aatgTCTTACCCTAAGAAAGACTTTTTTCTCTCGAAATCAAGAAAATTCT
CTAAAAttcttgaattttccgaccctaaGAGGTactactttaattttttt
ttgaattttgtaacCCTTAAAGAGACTCTGACAAGTGAAAAAAACGACCC
TTATCGTCCGCACATACTCAGCACCCATTTTTTCCTAAGTACCCTCTCCC
CCCGGGACCCTGACCACTTTATAACTCCTGACAAGGGCATAAATAAGGTT
GACataaggttagccaatcagattcatgcacttccaatcaaaacaatgat
accACGTgctttcaacaattgtttaacagccaatagaaatctgcaaccag
atttggcatctacaaaaatacccggctatTCTGTTTCTATATTAATATTA
TTATTCGCTTTAACTAAATACTATACTTCGAAACCACAGGAACAaagtag
acgggtctcccagctagctccacatccgtgtcaattcaatattcaaattt
aattcaaaaggcaaacgatatcactctttttCAATTCTACCTTTGTTTTT
CAGCACTTTCTGAAACCTAACACCATGGTAACTCCGGATGATCCAGAAGC
TCTGGAAAACTTCGTCAAAACAAAAGTCAAGGATAAAGATACCAAGAAAC
TTCGTCAAGAAATCAATGAACTTTTTCAACCTCCTAGACCTGCTCCTGCA
AAATCACTCACTTCTTCTAAAGCTAATGCCACGCTGACTCATAATGAATC
TAGCGCTACCGCTGTTGGAGATGATAAACAGACTGTGTCAACTGCAAACA
GTGCAGACCAACCTTTAAATGATAATGTAAATGGAGCCTTAAGTGAACAA
CACCCTACCGTAAATCAAAACGAACTAAAGAATATGTTCAGCAACATGCT
TGGATTGCAGCAACCGCAACCAACCAATCAAGAACAAGCATctcaaaaat
caaccaatgagattCCAGCCTCTTCACAAACAGCCAATCAATTCGCGACA
AGTAGCGTGTCTACGTCATCAAACACAGCACAAGATCCAAACGCGTTACC
TAATGATTTCGCTAAACTTTTAGCCAATGCTGGTGCACataatcttttac
aaagcttacaacaacaacaagctgATACGAGGTCAACACAAAATACGTTA
CAAAACTCTTTAAGTGGCTTAGATACTCAAGCATTGACGAGACAACTTTA
CAACAATGGATGGATGAACCCAACCAATAATATTCAGAATAATTTACAAA
ACAATCCTGTCTCCGAATACATAACACGTGCTTTAGCAAGCTCAGCTCAG
TCAGCTGCAAAACGCGGGCAAGTGTTAAATTATCAACCCAAGACGCGGGT
TGAAGACTACCAAAACGCGTTTGtccgaaatttttttaaatctgcaCATG
CGCACGAGGTTATCAAGCCTGTACGACGTGAGGAGTTGAGTAAACGAGGA
AACTCAGATAGATTTACGGGTGTCAAGATCAAAGTTCTTGAAAGGAGACG
ATCTAATATTGCTAATCAAATTCGAAACTTGCGAAGACATGAAATATTAA
ATCAGTTGAAAACATTGGATGTGGTTGGTACCAAGCGAAATGTCCCTAAC
TGGTAAGTATTCATTATATGCACCATTTTAATGTCTTTCACAGACGCAGC
GATCTGGTTCTTGAAGtaggaaaaatcggggaaattttgaCGCATTTCTT
AGCATAATTCGAGTTTTTGTCATCATATAAAGATTAAAATTTGCATAAAT
GTCACTTTTAACGAACAAAATACaccaaaattattattttccgaaaattg
tattgactgattttacgtcacttacaatcAATCAGCTGTTCGATCCGTGA
TGTAAAATCAGAAGATATTACAATGAATATATAATatgtatatcatgaat
agctGGTTTCTCTTGATTCAGATCTTATTGCTTTATTGCATTTATATGCT
GCGTCTAACGTTTCATGGTTACAAATTTTAACATGTTTGCAAAGTGTTGT
GTTGAGCAGTTTAGGAGAGCTGACATCataattttttctagaaaagaatc
ttcaacctttctcaaccAAAACAAAGTAAAATCACAGGAATGGCGGATTT
ATCTAGCTGAtcgttcatttttttcattcgaCAATTTTCCGAGATCAGAC
GAAAGATTTTACACTTGcagtcttcataactcgaacctccataactcgaa
tgtctccttaattgtcgaacaagttttctggtcccttcagtcaacaatgc
cttataaaacaATTTACatcagtaatttttttttgattgggCCAAAGTTT
GCTCCCCGTTcgtgttcgagttattgagatttccattgtattttaagTGT
GGAAAACATTTGATTTTCTTTAGGCGCGATAGAGATGGTTCCATTGAAGC
CAAAGAAGAAATGCATGATgctcatgatgaaatggatgatgatggtgatg
aaaaatttgaagaagctTTCCTCAGGAAGAAAGACCATTCACAAGACCAA
AGGGTgagaaattttctgatttttgcaacctttagaaaagagattttgga
aggtgaaaaaaccgacgaTACTCCGCGTGCGGATCTTtacagcaattaag
agaagggtcAAGGGTAAGTAGAGCAGTCCAGAGAGAAAGAGTAGCGCCAA
CCCCTACCTTTGGgtaagaggagccttcgggtcgcttTCAACTGCAGTCG
CAAACTTACCGTGAAGTCGTGTAACTTGCATAAGTGGGGGGAAACTTGCA
TATCCATAAAATGACTGACCattcaaagcagcaaaatttcaaaacaaatg
agcTACACAGCtctgcttgcagctctactctaccatttttgttttgattt
aattttgtattttaatgaccagacaagtcattcatttaagggctatgcat
gtttgcctccactgatgcaagctaCCTGATTTAACGGTACTTTATAAAAA
CATTAATTTCCATCTGTCCACAGGATAATGAAGAAGAGAGAGGACGTCAT
TTCGAAGAGAAGTCAGAAGTGCGGGATGACGAAGCGACGAGGAGACATGA
TATGGATAATCCTGTTGATTTGTTGgcttttgaagaaagaaaagcGGATA
GGGGAACTGGTACGTAGCGTTACTTGTTTGATAGTCaccaagctggcaca
caacgttgttttaacgtctaACTAGTGTTCACAACGTTAGACGTTGAGAT
CTGAACCGCTATGAAAGAATGGGCCTCGCCTTCTACCGTAGACCGCTCAT
CACGACTGCCCCCTCTAAGTATGGCCCATTTTTTCATAGGGGTTCAGATC
TCACTTTTTATATCACTAGATTACGTCATAATAAAGGtttgcgcgaacaa
aaaaaaattgaaagaagttctactttttgcatccattacgtcaatttcga
caaATGGAATTGCTTcgtttttcaaccgaccaatgaccttacaaaaacgt
caaaaagttttcactcATGTATGTCTCGCGAAAGTAGAGACCGGCCATTA
AATATACCAATCTGTCTTCATAGGTAATGGTAACAAACGGAGCAAGAAAG
AGGAAGACAACAGTGACGATGGAGATGCAGACAACAAAGATTCGGTTGAT
AACGATGCAGATGTCACCTGGCGAAGACAAGCAAGTAAGAAAAATTCacg
taaatgaaaaaaaacattcgtATTTGCAGTATTTTAGCAAATTAATCATA
ATCTGAAACGGGACTCTATTTAGCTTCTTATGCTACCACCTTCCTGATAT
GTCATTTAGAATCAGAATCTTTTTAATTCAAGCAAGTAAGCTGGACCAAA
GAAAATTCTGATTCTAAATGACATATCAGGAAGATGGTAGCATAAGAAGC
TAAATAGAGTCCCGTTTCAGATTATGATTAATATAGTTAAATCACTTTAT
cgctaagaccatgttcagacgttacggttccgtctCGCTCCGATATGATT
TTCGCTACGCagcgagtgtgttcatattggtttcggaacgtttcagagac
agaaaacggagcagttccgttccgatgaaaaaagtggagcgaaacggttt
cgatctgttttgctttgtaacgtcttcttttttgacgtttcgaattttga
cgctcaggcttgtttcggaaccgtatcggaacggaacggaacagAACTGT
AACGTCTAGACATGATCTAAAAACGTACGCTAACATGCACATGTACTTTT
ATTCTTAAACTCACTTCTTCTTACTTGAACAGAGAAAGCAGCCAGAGCCC
ACAGACGGTATGGTTTAGAAGACGAGGAACACCACCATAACGCTACATTT
GAACACAGTCTGACGGAGAAACTTCTAGATGCTGTTCTCAGTGATAAGAT
AGGCCACAAAGATGAGCATGGTCATGAAGTGAATTTAggtaaattttatt
tgttttatttgaaagtctttttaaactcgaaaaatctaacttttttagat
ttagatttagatttaatTTAAAGTTCCAACTTTAAATGCAAGTATCTCAG
CTTTGGAGCAATCTAAATAGATCATAATTGggttcgttggaaagctcttt
ttatgCTCTATCTTTTCAGCGTGCCAGATCTTTAAATTAGGTCCTCAAAA
AGGTTACGGCAGCCGAAAAGTATCGTTCCAAATGGAGCGCGATTAGCTGG
GGCTGTCCTGAAAGAGTTAAACCTTTTAATCAGAGTGGAACCACAGATTT
ctgctggtacacaacgttgtttcaacgtttatctaacgttcacaacgtcc
atataacgttagatgaacgttcaaacaacgttgtgtgacGGCTgggattt
ctgtaaagcccgaaggacttgatgtcgtgctttaaagcttttctaagcaa
aaacaaagtgaatatcgcaaaaaaatattatttcttttgttttcgaaaat
ccgctaagcttctgattggtctaGCGCTGGAATTCTATTGTCACTTGACC
TCGATAGGATTTCTTACCGAAATATATGACACACTTTCCAGCCAAAGCAC
GCCATCTTTTCGGGCTTTATAGATCTGTGAGTGGTACTCTAAGTGGTACT
CTATGGTGGCACTACTCAATGTtggtaaagaaatttttgaacggaaaatt
ttattaaaatacaaaTTGACCCACATTGAATAGTGCTCNTTTTTAAACtc
gaaaaatctaacttttttagatttagatttagatttaatTTAAAGTTCCA
ACTTTAAATGCAAGTATCTCAGCTTTGGAGCAATCTAAATAGATCATAAT
TGggttcgttggaaagctctttttatgCTCTATCTTTTCAGCGTGCCAGA
TCTTTAAATTAGGTCCTCAAAAAGGTTACGGCAGCCGAAAAGTATCGTTC
CAAATGGAGCGCGATTAGCTGGGGCTGTCCTGAAAGAGTTAAACCTTTTA
ATCAGAGTGGAACCACAGATTTctgctggtacacaacgttgtttcaacgt
ttatctaacgttcacaacgtccatataacgttagatgaacgttcaaacaa
cgttgtgtgacGGCTgggatttctgtaaagcccgaaggacttgatgtcgt
gctttaaagcttttctaagcaaaaacaaagtgaatatcgcaaaaaaatat
tatttcttttgttttcgaaaatccgctaagcttctgattggtctaGCGCT
GGAATTCTATTGTCACTTGACCTCGATAGGATTTCTTACCGAAATATATG
ACACACTTTCCAGCCAAAGCACGCCATCTTTTCGGGCTTTATAGATCTGT
GAGTGGTACTCTAAGTGGTACTCTATGGTGGCACTACTCAATGTtggtaa
agaaatttttgaacgGAAAGTTTTATTAAAATACAAATTGACCCACATTG
AATAGTGCTCCCATTGATTGGGGTATCACTTTTCTAAAAACACCAATCGA
AAATGGTGGTTAATGTTTATTCCAGGTTATAATAAGGCCAGTGGTTTGTT
TCAAagctttttgagatttttgttacatcaaaagtaattttttttctggg
aaCTTTGATTCTTGTTTTCTACAGttttaagaatctttttttcgtttttt
attaaCCTATCGATTGTTGTTTTTTAGTGATACACGTTTTACAGTTCGGA
TATTGATAAGCTACAAATAAGGTCGCCTTCAAAGTTCTGAAATACTAGAA
ATACCCATACTTGCTAAAACCACTTGCTCTTTTATTTAGGATTTTGTCTA
AATTgagatattattttttttacgaTTTAATACAAGCAGTGTTTGATTAC
GAATCTTAACACGTTCGCTCCCGGCAACGAGTATACTCGTAGTAGAGGGG
TCAAAATACCAGTAGTACTGTAAAGAGCCATAATCTTTTATACAGAAACT
TTTGCTTGCTTTTTTGAATCTATTCTGCGGCATGTCAAATTGGAAGGGAT
TCGAagcataccttatcggggaaaacttcgtcggggaaaagtgacgaaat
tttggtcaagtgacgaatatttttccccgacgaaaattttccccgcgGAA
GTTTTCCccagccttaatgcgtttaccaactaccagcaagtgacgaatat
ttttccccgacgaaaatttttcccgacgaagttttccccgataaggtaat
tgaAGCTAAATTACAGCTCTGAAAGTCAGATCATCGATGGTCAGATTTTC
AATGAGATTCCAAGAGatcaaattttcgatttctgaaAAGGGGCCGGCAG
TAACGTGTAAGAATTGAAGCTTAAGAAACTTCCAAACTATAATAACCTGT
AATTAACTTGTATTGTTACGTAATAAATTTAGCTACGTTAGGCCGTAAAC
GTGTCTATCCCGGAGGCGGATTCAGTCACGTAGATGACGGAAATTTCGAG
CATCGGATCGCTGAAAAAATCTTGGATACTGTACTATGGAAGAAATTGCA
TCATCTCGGGTACCGGCCAATGACTACTATGAACTGGCTCTCAGGTGGCG
GTATAGGTGGCGCCGGACACCATCGCCAGGGCTTTGAACAACGACTTAAC
AATAAGCTTTTAGACGCCCTTATGATTGATAAAGTTGGCATTCATGGAGA
TTCGTGGGCGAATATTGAAGAAACAAATCCTGACGCCCCATTTAGTGACC
GCCTCAACGGGCGCCTGATGGATATCATTATAACACGGAAATTCGGACAT
CACCATTATGGTGATAACCCTATGCAAGATCCGGACAGTCATGTTGGTAG
GGGCAACCAGATAAACAacaatgaaaaacatgaaacaaGAGAGATAATGA
ATTTTAGTTTCTTCTGCAATCAAGgttataaaatttgataaaaagggaaa
ttcccaaaaaatCTCATAGCCACAAATTATTCGGAAATTATTCTAACACT
CTAACGCTCTAACGtcgagttttaacattagacttaagattccaaaaaaa
tggttcaataaggctcagaatatacaCTGGTATATAAaccagagatttgg
aaaaagaggataagaaatgcgctattcatctatttgaagctaggctgtag
aatcttttgtttctattgaaatgtctgcGGCCGATCGATTGTTNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCCAAAAA
GAAGTTGCATCAAAATCCACTTCGCCAGAGAACATTTACATAATAATGTG
TATATCGAAATCCCCAATTTTCCATTGAACATTCTAATAATATATATATT
AACATCCATTTTTCAAAGGGCATACAGGTCCAACCGctcaaatccacttt
ttccataaatataACATCAAACACCATAGAATTATTATTCCATCCTGCTT
CTGTTGAGTCAAATAGATATAATaccggcaggtccaaaatgcataaaaca
taatgcatattgcataatgcataatgcataatatttgaaaaatgtcaatt
ttagtgcctataataaggagaattttaaagattatactttcaacaaaaca
aatataccactttctaccagaaaataaaggatagaaagctgtaaatttga
attttgaatgatgaagaaaatccatgatccactgaaaatgcttgtcgcca
ttttgattttcatagttgtattNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNAAAGTACCAAAGCCTTACACCTTCTAAATCATAATCCA
CTGACTGGTCAAAATCATGGCCCTTCAGGTAGTTACAATTTATAAATATC
ACATgtcaaagttaatttttttaaatgtttttgttgttgaaaccttgaaa
tttccaacccaaaaatcaaTGGTTTCCCTAGATAAAGCTAAAAGTACCAC
AGAGGAANgtcgttctgtaaattacacaatactattatgcattatgcaat
atgcattatgttttatgcattttgtacctgccgtaAAGTTTTCATACATC
AGTTCCCACTCATCTTTTAGCAGTCCTTTTCTGCTGGCACTGCAGGGAAC
AGACGTGACAGTCAACATGCAAAAATGTCTGAATCTTGAGTCAATCGTNt
acatttttttaatcaaaaagttgaagaaaaacaacaaaattatcaatTGA
TTTTGCCCATCTTAAATCAAAATGCCAAGACGTTTTAGAGAGTGCCGGGG
TAAACTAATACTTACATGATCACTATCAACCTTCctactacccataaaaa
ttatgtctgcaacacaaaaaattcattcagagcAATACAAGCCAGAAAGA
AATTCGTCCCaattgttcaaaatttcaagcatgcctcatgtccgccatct
ttactcccagaatatggaatgattttcctcgattttctcAGGGGAAACCC
CCAAAAGATCAAAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNTACAGCcttgcttcttcaaagggtgcc
gaattcaaagggaaagaataggaaaacagcgagcggcagcggcgtttctt
atcctcttttcccaaatctctgtaTAAACTATACTATAAActcctcccaa
attgaaatatttgattacATTTAACAgatagcccaaaagcgactttctct
cCCGaacttaaattttctaaaagcaaggaaatgatcaaaattttcaatat
attttgccTCAGATTCCGACAAAAATAACTTCAAAAATCTAAGAATATAA
TCCAGGCATTCGTGTCGCACATTTTTTATAGCCAACAATATTAATTGAGT
TCGTTAAAAATCATGTGAAATCTAAAGGTTCTAAAGGGTCTAGCATTAAT
TAAAATTATTAATAATGCCagttatataaaaataaaaataccaaaactaA
AACTGGCTGTTTTAATACATTTTAGAGAACTCATCTGGAAACTGcaagcc
aaaaagaaaaattgctaaaaatcacaaaatctcaCAAAATCTCTGCGAAA
TCAAGATGAATATATTCTAAAGTTGAAACTTGATATTCTAACTAACTCTC
TTGTTTTATGTTTGGATTCTAAATACttcttatttctatttctatctttt
gttttctttttcatttcttatAGCTGCTACCG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_030544XLOC_030544Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00047996-exon-scaffold_14-1491911889:337911..338196TCONS_00047996-exon-scaffold_14-1491911889:337911..338196Clytia hemisphaericaexon
TCONS_00047996-exon-scaffold_14-1510915933:337911..338196TCONS_00047996-exon-scaffold_14-1510915933:337911..338196Clytia hemisphaericaexon
TCONS_00047996-exon-scaffold_14-1575043694:337911..338196TCONS_00047996-exon-scaffold_14-1575043694:337911..338196Clytia hemisphaericaexon
TCONS_00047996-exon-scaffold_14-1491911889:338668..338808TCONS_00047996-exon-scaffold_14-1491911889:338668..338808Clytia hemisphaericaexon
TCONS_00047996-exon-scaffold_14-1510915933:338668..338808TCONS_00047996-exon-scaffold_14-1510915933:338668..338808Clytia hemisphaericaexon
TCONS_00047996-exon-scaffold_14-1575043694:338668..338808TCONS_00047996-exon-scaffold_14-1575043694:338668..338808Clytia hemisphaericaexon
TCONS_00047996-exon-scaffold_14-1491911889:340092..340249TCONS_00047996-exon-scaffold_14-1491911889:340092..340249Clytia hemisphaericaexon
TCONS_00047996-exon-scaffold_14-1510915933:340092..340249TCONS_00047996-exon-scaffold_14-1510915933:340092..340249Clytia hemisphaericaexon
TCONS_00047996-exon-scaffold_14-1575043694:340092..340249TCONS_00047996-exon-scaffold_14-1575043694:340092..340249Clytia hemisphaericaexon
TCONS_00047996-exon-scaffold_14-1491911889:340864..341912TCONS_00047996-exon-scaffold_14-1491911889:340864..341912Clytia hemisphaericaexon
TCONS_00047996-exon-scaffold_14-1510915933:340864..341912TCONS_00047996-exon-scaffold_14-1510915933:340864..341912Clytia hemisphaericaexon
TCONS_00047996-exon-scaffold_14-1575043694:340864..341912TCONS_00047996-exon-scaffold_14-1575043694:340864..341912Clytia hemisphaericaexon
TCONS_00047996-exon-scaffold_14-1491911889:342684..342813TCONS_00047996-exon-scaffold_14-1491911889:342684..342813Clytia hemisphaericaexon
TCONS_00047996-exon-scaffold_14-1510915933:342684..342813TCONS_00047996-exon-scaffold_14-1510915933:342684..342813Clytia hemisphaericaexon
TCONS_00047996-exon-scaffold_14-1575043694:342684..342813TCONS_00047996-exon-scaffold_14-1575043694:342684..342813Clytia hemisphaericaexon
TCONS_00047996-exon-scaffold_14-1491911889:343284..343419TCONS_00047996-exon-scaffold_14-1491911889:343284..343419Clytia hemisphaericaexon
TCONS_00047996-exon-scaffold_14-1510915933:343284..343419TCONS_00047996-exon-scaffold_14-1510915933:343284..343419Clytia hemisphaericaexon
TCONS_00047996-exon-scaffold_14-1575043694:343284..343419TCONS_00047996-exon-scaffold_14-1575043694:343284..343419Clytia hemisphaericaexon
TCONS_00047996-exon-scaffold_14-1491911889:343834..343944TCONS_00047996-exon-scaffold_14-1491911889:343834..343944Clytia hemisphaericaexon
TCONS_00047996-exon-scaffold_14-1510915933:343834..343944TCONS_00047996-exon-scaffold_14-1510915933:343834..343944Clytia hemisphaericaexon
TCONS_00047996-exon-scaffold_14-1575043694:343834..343944TCONS_00047996-exon-scaffold_14-1575043694:343834..343944Clytia hemisphaericaexon
TCONS_00047996-exon-scaffold_14-1491911889:344543..344698TCONS_00047996-exon-scaffold_14-1491911889:344543..344698Clytia hemisphaericaexon
TCONS_00047996-exon-scaffold_14-1510915933:344543..344698TCONS_00047996-exon-scaffold_14-1510915933:344543..344698Clytia hemisphaericaexon
TCONS_00047996-exon-scaffold_14-1575043694:344543..344698TCONS_00047996-exon-scaffold_14-1575043694:344543..344698Clytia hemisphaericaexon
TCONS_00047996-exon-scaffold_14-1491911889:353634..353642TCONS_00047996-exon-scaffold_14-1491911889:353634..353642Clytia hemisphaericaexon
TCONS_00047996-exon-scaffold_14-1510915933:353634..353642TCONS_00047996-exon-scaffold_14-1510915933:353634..353642Clytia hemisphaericaexon
TCONS_00047996-exon-scaffold_14-1575043694:353634..353642TCONS_00047996-exon-scaffold_14-1575043694:353634..353642Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_14supercontigscaffold_14:337911..353642 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.0175884	0	0.0199796	0	0	1.04396	0.583111	0	0	0	0.0634647	0.556295	0	0.241153	0	0.494018	0	0.115039	0.160507	0	0	0	8.13926e-06	1.36121	0.786807	0	0.0263942	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00047996 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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