TCONS_00048329 (transcript) - C. hemisphaerica

Overview
NameTCONS_00048329
Unique NameTCONS_00048329
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1237

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00048329 ID=TCONS_00048329|Name=TCONS_00048329|organism=Clytia hemisphaerica|type=transcript|length=1237bp
GCAAGATGTTCGTTCttctacaaaacatcaaaaCTCGATGTCAAATCAAC
CAAACCGggaGGATAGATTTTGCAACAAGTACTGGTAAACTGTTACACAT
TGAACAACATATGAAAGAATATGGCTCCACCATCATCGAACCTCGTGAAA
TTCTGGTTATTGTGCAAATTGAAAACAAAGGACAACTGGGTTTGAAATAT
AATCCGCTTTTCACAGCCACAACAGAAGAAGATATCAGCCTGAAAGAGAG
TATTGAGCTCCAAAGCACATACCGAGACCCTCATCAACCCAAACatcaga
aaaacaaaaagaagccATTGGTCAGAACCACTACATGGAGGTCTGCCAGG
CGGATTGCAGTTACCACAACCAAAGCTCCACCAAAGACAGCAAATGTACT
TTTAAGAAGACAAGCTTCAAATCTCGCTCCATAAAAAGTGAAAGGAAATT
AAGTGGCACAGTGAAGCACGCATCATTAGTTATACTGCGATGATGTTTAC
GTACcattagaaaagaaaatcattatCCACCACTTTAAACCAGACAATAC
CACTGAACCAGTATGACAATTGATGCTAAAGCAATTATATAGGAGAACAG
AGATTGAAGATTACATACCtcctaaaaataaatatacccaaattcaaatt
tgaaaacgtgACGAGTTTGCGTGAGGAGATGGAAGCAATTGATGTCTTTT
AAGAAAAAGGGATACCATatgttttaaacaaaacaataaGTTTCAGCTTC
TGCAATACTGGTGAAAAGGAGAATGTAAACAAGGAGAATTTTCATTCTGA
TGAAGAAAAAGCAAAGGAACAAACAGTAACAACTTCAAGTCAGCAAAATC
AGGAAAGCATTTGCCGGACCCATGTTTAGATGTGTTTCTAATTTGTCAAG
TTACGTaatatccgccattatggaagcaaaagTTCGATCAGCGGAAGTGA
TCGCCACTACAGATTTGAAAACctgtttccataatggtggaagtCACGAA
ACTTAAGGAAACATGAAAACCTATATAGCGTGTTAATGCTTATTGACTTG
AAGGACACGATGATATATGCTACTTGGTCAACATTAAGGGACAAAAACCT
ACATGATTCAATGTGGTTTTATCAAGTATATACAATCAAAActtatcaaa
atatttacagATTCTTCattacaataaaataaaaataatgcattaactta
agtacacgttttttataagaacaaactatgtaaaaac
Run BLAST on NCBI

protein sequence of TCONS_00048329-protein

>TCONS_00048329-protein ID=TCONS_00048329-protein|Name=TCONS_00048329-protein|organism=Clytia hemisphaerica|type=polypeptide|length=143bp
KMFVLLQNIKTRCQINQTGRIDFATSTGKLLHIEQHMKEYGSTIIEPREI
LVIVQIENKGQLGLKYNPLFTATTEEDISLKESIELQSTYRDPHQPKHQK
NKKKPLVRTTTWRSARRIAVTTTKAPPKTANVLLRRQASNLAP
Run BLAST on NCBI

transcript from alignment at scaffold_142:914951..924014+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00048329 ID=TCONS_00048329|Name=TCONS_00048329|organism=Clytia hemisphaerica|type=transcript|length=9064bp|location=Sequence derived from alignment at scaffold_142:914951..924014+ (Clytia hemisphaerica)
GCAAGATGTTCGTTCttctacaaaacatcaaaaCTCGATGTCAAATCAAC CAAACCGGTAACTCTTAATTGTAATCTGGACTATCACAAAATAAAGGGAC GCCTTTAATAATTTCGCGTATTTTTGACGTGTGACGTCTATATTTGATTT CGCGCGTCACTTCTCGACCAGCAATCAAAATATACTTATTGTTAATTTAG TTTTTATTGAGTGCCTGAATGGATATTTGTTTCAAGGAGGCGCTATCCAA TCCGTCTGGCCTAACAATATAGTCATGTACAGTTATAATACAGCATTGTG TCACAGACTCCcgcccactgaaaaatttggccaaaatttcttccacgGTT GGACATATACCCTTCAATTTTCACCCCAGTTTTCAAAAGTTCAATGTAAA AGATTGCACTCCAAAGACATCATCCCAAATGGAATTTTAACCTGAGAaga atataatttctatccccattagggTTTTCATAGAAATCCCTACTGTGGGT CATGAGATAGGGTATGATGAATAATGGATAAATGTTCTTTGATAGCCCAG TATTCTAGGACTTGCAGGCTTTTATTATTGTTTAAAAGATAAGGAAGCTG GGCACTACTTATATATTAGATGGAGTAGTTATAGAAGATTGAACTtcttt aataatattttaaatagCCAGGGCTAACAGAAATATACGAACTTTCAAAC GGAAAAGAAAAAACCTTGTGTTAAACAGTTTCgtcaaaagaaaataatat agGAACAAGAAAATAGACTAACTTCTACCTGAGGTCCTAATTTTCATGAT ACTTTACGATATTTTATCTATCCTACTTACTTTCGAATAATATTCTTTTT CAACGTACAAATGTTGTGATAAAAACACTATATTGGGATTTTACCTGAGT AACATCATTACAGAAATAGCGAGTTTTTGTACTGGAGaaatcgaaggaga cggtataaGCTAAATCAAAGTTGACATGCCGCCAATATCGCcctccactt tgctcgacgacggtaaaagcACCGTCTGTTTAATTAAGGTGATATAGAGC TGTACATcgactatcgactttgtttttcGTCAACTTATTCACTTAATGTC GCGCTTGATATCTTacaatacataaactcgctgatAAGATGAAGAAAGAG GTCGATGTTTTGGTAAAAAAAGGGGACAAaacgttttgattttgacacag CGATAAATTTCGTTTATTGGAAATTGATGAGCTATGTATTCATCATTTAG GTCCAGAGAACATgggaaaaagaacatttttagattgTTTAAGCTCTTGG AACAGCAGGTTGTGTTTATCTGAtaaggaaataatttttttgaaattgtg aaTTATTGATCAACTCGGTGATGTACGTGAATTCTCTTACAGAACACACA AAGTTGATTTGGTCACCCCCTTCGCTAAGCTTTCTATTTGAAAACTGAAG GAGACGAGGGTATTTTCTTGATGAGTTCTTGAACGACCTAAAATGTTATT CATAGCTACTGTACAATGAATTATTTACTCTTTCGAAACAGtcttaaaaa attgaaactcaAACATTATCACCAAACTGTTAGAGAACTTTCTTTACCAA AAATATAATCATTGTCATTTTCCCTTCTCATCAAGTAAATTATTTTCGTT GGATTTCTAGACAAAGTTCAAAGTGAAGGAATAAggtcattgaaaaatat ttatatttggaTGGAACGATAAAATACAATTTATATTATCTTTACAAATA TAGTTGAATTTCGCTAATTCAAACTCGAACGgggggaaaatattttttct tcgaattacagagagcaTTTTACTAAGTTTTCTCTTCGACGAGAATGAAT TGGAATTCCAGAAAGATTGAAGACAACACTGTAATAGATTTTTGAATAAA CAAGAGCTCACTGTATAGCAACAAATTCTGCACATTTTGTAATTGTAGAA TTTGAAAAGTTGAATAAATGAGTTTTTATCTCGGTTGACTTCCATTATCA CCTCTTTCAAACAAGACGTTTTCTCGTTAGCACccgaaaaatgccaaaaa catgCCATAATTAAAAGACTATTTTTTTCGGTAAGCTTTCGCACCTAAGC GAAATAATTTGAGGCTATTTATTCAGCTGGTATTATGTTTTCTTTATAAA TATCATTTAAGAAAATTCCTTTCTACAGGATGGTAACTTTTTTCTAGCGA TAAGTTGAAGCAAAACTAATTTCATTTGGGTAATCTAGACTCAAactgtg aagatgaaaagaaattttttttgcgtggaaattattttaatgaatatttt gatttcaaaaaatatgtctAGAAGGGTAGTAGCTCTCACCTTATTCAAGT TGTTTGTATGGGGTTTTATCACTTAGACgtattgtaaaaaaattcaaggt aGCTCGTATGGTACTGTAATAGATAtatcactgggcgaaataagagattt ccaatcctggaagtatcttgaaaatatgaaaaaattaaaatatgatACTT CCATATACATTTGTTATGGAAATTtagaaatctcttatttcgcccagtgc atTATTTTCataactagccataactttcattaaggtgccaccgcagcaaa acgaacacatagagttgaatttgcgttcaaaaggaatgatcttagcccta cagtaattttggttaaaagtgacctctcatctgagacaaaattctttcaa ttgctaacaaatgtgtcaagggagtgatttacagtctacttagagtgaca ttcgtgccttgtcttacacgttttttataagaacaatttcataagaatac gaggctgaaatttggctaaaacctaagaacaaattaagaagaatctgagc ctcagatttcagaaattactgcaAAGTACAGGTTTCCATTCTCCTTTata ttaatattgacatttaagcctgaaaaactcCTGAACTAACCTGAAGATAA TGcacttcatatgttattttactaatgtacacgtttagcaacataactgt tcgatACTTTCAGTAGAGTAATATTTTaaacctatgaagagcgcttaata actatttgtggtataaaaaaggaatttcccagaaaaggaNctatgaagag cgcttaataaatacttgtggtataaaaagggaatttcccagaaaagggaa tttccttagattcattaactctccagggataagaaaaagacaaactgaga tttcaaaataagtaatcagatcaaaataactccggaaaagtctttttgat gatgataaaacaatagagagaccgtaagataagaatgctaccgttaagtg gaactaaaatactgaaaaacgcacAAACGCaaacgcaaaattatgagatg tttgcccaacttctttatgcgtgaagctatgaatgccatcgggagcttta ggctccctgcggtggcaaCAACAAGCTTAAAACTNagctatgaatgccat cggGAGCTTTAGCTTCCCTGCGGTGGCAACAACAAGCTTAAAACTTCAAT AAACTCATTATAAATCTGTGTCTGTCTTTCACTCTTAAGTACAGTTCTTT ACGTATGATTCCGGTAAATTTTACAGTTGACTTTCTCTAACTCGATCAAA AACTTTCTTCGAATTTGAGAAAGGTTCgtattacagagagtaattcaTTA CACAGGAGTGCTAAGGGGACGGATAGAGGGGACCAATTTTTTAATCCGAA TTAATAGAGATTCAAATTAGAGAGGGTCAACTGTACTTCAAATGATATCA AAGACTTTCTACtatcagaaaataaaaacaaagaaagcttGCTTAAACAG GAAAATGGCAAATTGCGCCACCACACAAAATGTTTCACAAATTTTGACCT GTGACGCGGACCAATTCACGCCGTATGTTTTCGACCCTGGCACCCAACTG GCGTTCAAGATTCGTTCTTTGACAATCATCCCAGTATGTGTAACGGGAAT CTGTTTGAATCTTGTTGTTTCTATGGGAATGGCTACGCATCGCCGTATGA GAGATTTATCGCTCAATAAATTTCTATTGACCTTGACAACTGTTGatttc atgatatcaatgatagtACTGCCTGTATATATCCATTACAACATTTTGCT ATCCGAAGGACATTTTTGCTGTATCGTTGGAAACGTATTACTGAGTACAG CATCTTCCCTCACAATGATGTCTATAACTTCTATTGTATTCATCAATATT CAACTCTATTTGGCGATCCTTAAACCGTTCATCTACAGTAGGAAGTTTAA CCAGAAATTCACATTACCGATCTTAGTGTCCATCAATGTGTTTTGGGCGT TATCCACAATCACAGCTCTTTTTGTCATTCCTACATGGTGGTCGACATTT CGAACATCGGCCAGTGGATTTGGTTTCTTAtgctatattttgattttatt tctaCATTATTTCATTTGTAAGGAAAGCCGTCATATCCGGGAACGTTCGA AAAGCAATACAACACTTTCGTGCAATAAGATAACAAAGAAAACTTTACGG CTGACGACTTCTGTTTTGATTTCATTCGGGCTATGTTATCTCCCGTATAT CGTAATGTCCGTATACACCATGGTAGTACCTATTACACCTGAATTTAACA CTTATTTTGACACCTGGGCTGAATATATTGCTATGATGACATGTGTTTTG AACCCTATTTTATACTGTATTCGATTGGGATCTGTGAGAAGAAGTGTTTT GAGATTATTTGGATGTGGgcgtgttatgaatttgaggtCGTTCAGTATGA ATACTTTCTCTGTGAAAGAGACTGGACCCAACAATACAACCACGTGAGGA AAATGTATTCTGTGAAGAAAATGTATTCTTAAGAATCAAATACACAATTC ATTCAGGCGATAAATTCAAAGTTGGATAAATTGTACGAAAAAGTACTTGA AAGCTAATGGTACTACTTTAGAAAAAGTTATATCATGAAAAACCCATCAG TTTTCGCATTTTTACAGCTAAGGAAAGCTACTTACCCATAATaatttatg atgtttttaattctACTAATCTAATCTCACTAGAAATAAATATCCTAAGA TAACGAACTCCAATCTTCGCAATTTCCCTCagaaatattttaaagaatac acgctttttttttataagaatggtgtaaatgcatttcatcatggatattc ttaacttttttgggaaaatcatcctaaaatattcttatagcaCATTCTta aggttaggatcctaatttatactagatttaacatttagttcatacgtctc aagcataaaatggcacttttgtaaaaggagtgagccttacttggggataa ttgataatttataatgaaaatgctcttaaaatgactttcttagctttagt agcaaaattcaatgatggtgatattcttagcatattcttagttttttggc cattttcatcatagacattcttataaagtgtattcttatgaaaaaagcgt gtaagatGATAGGTGAGCACTCttaattttcaaagtttaaatcAGGTTAA TTTTACGTTGCGTTTTTGTTGAACTACCAGGTATCTTGAAAAAACACAAA AGAGAATAGTATTCTGATAAAAAAGATATACTAAGATATTTAAAGATATG TTAATGAAATAATATGATATCAAAGATCAGGCCAGTGAGAGAGAACGCTA CTCAAACTGTTTCCTTTCTTTCTCTAGAGTAAACTTCTCTCCCTAAGCAT CGGTAAACTGTTACACATTGTTTATGCTTTACTGTTCGAAAGAGATTATC GATAATCAGGACCAATGAGCTCTTGTAACAGCTTTCTTATTGGTCCTAAA ATGTGGAAGTTTTTGCGTCTAAACTAACGGGAGGTCGTTATTGTGACCCA AGCAGttattacccatgattcatctCGACCGTAAAATGAATGGATGTCCA ATTGACTTTGCTTTCCTTTGTACTTCAGGAAGGATAAACTTTTCCAtaaa cacacccctgtctcacagccccactggaactTTCTTCCTATTGAAATtcc gatggggatagaaattatatcgttcctaggttaaaaaatccagtggagaT GGGTTTTGAgtgtaattttttaaacattcattttcgaatggggatgaaaa agtcattttcccagtggggctgaaatttttgtcaaattttccagtggggc tggggtcctagtgggtctgtgacacaggggtgtataaacCTTTGAGCACG TTAACGGTAACACATCGTAAAcaagttaacttttattttgaggGAGGATA GATTTTGCAACGAGTACTGGTAAACTGTAACACATTGAAAATgagttaat ttttattttgagggAGGATAGATTTTGCAACGAGTACTGGTAAACTGTAA CACATTGAAAATgagttaatttttattttgagggAGGATAGATTTTGCAA CAAGTACTGGTAAACTGTAACACATTGAAAACaagttaatttttattttg agggAGGATAGATTTTGCAACAAGTACTGGTAAACTGTTGCACATTGAAA ATgagttaatttttattttgagggAGGATAGATTTTGCAACAAGTACTGG TAAACTGTAACACATTGAAAATgagttaatttttattttggagGGAGGAT AGATTTTGCAACAAGTACTGGTAAACTGTAACACATTGAAAATgagttaa tttttattttgagggAGGATATATTTTGCAACAAGTACTGGTAAACTGTA ACACATTGAAAATgagttaatttttattttgagggAGGATAGATTTTGCA ACGAGTACTGGTAAACTGTAACACATTGAAAATgagttaatttttatttt gagggAGGATAGATTTTGCAACGAGTACTGGTAAACTGTAACACATTGAA AATgagttaatttttattttgagggAGGATAGATTTTGCAACAAGTACTG GTAAACTGTAACACATTGAAAATgagttaatttttattttgagggAGGAT AGATTTTGCAACAAGTACTGGTAAACTGTAACACATTGAAAACaagttaa tttttattttgagggAGGATAGATTTTGCAACAAGTACTGGTAAACTGTT GCACATTGAAAATgagttaatttttatttttagggaGGATAGATTTTGCA ACAAGTACTGGTAAACTGTAACACATTGAAAACaagttaatttttatttt gagggAGGATAGATTTTACAACAAGTACTGGTAAACTGTTGCACATTGAA AATgagttaatttttatttttagggaGGATAGATTTTGCAACAAGTACTG GTAAACTGTAACACATTGAAAACaagttaatttttattttgagggAGGAT AGATTTTGCAACGAGTACTGGTAAACTGTTGCACATTGAAAACaagttaa tttttattttgagggAGGATAGATTTTGCAACAAGTACTGGTAAACTGTT GCACATTGAAAACaagttaatttttatttttagggaGGATATATTTTGCA ACAAGTGCTGGTAAACTGTAACACATTGAAAATgagttaatttttatttt tagggaGGATAGATTTTGCAACAAGTACTGGTAAACTGTTACACATTGAA CAACATATGAAAGAATATGGCTCCACCATCATCGAACCTCGTGAAATTCT GGTTATTGTGCAAATTGAAAGTATAATAGAACCTATAGCCTTTTGAGTTA TATTCTCATCGCTAAGTTTATAACGTCCATTAAACCTAAACCGCCAAAAC AAACTCGTAGTCAGACCAGAGTCAAGTAaaactaaatagaaaaaaatcac aGCATTGAGACGAAATCTTTCAGTAGAACCTAGAATATAATTTaccatat tttcatttttcacttcCTTAGACAAAGGACAACTGGGTTTGAAATATAAT CCGCTTTTCACAGCCACAACAGAAGAAGATATCAGCCTGAAAGGTAAGGC TCTTCAGGATTTAAAATGCATGATTACAATATCGCATTTTCGGTACTTTT AGTCTGGTAGTTATCAATTATGATGGTTCATTGACTGTGATAAGTCATAC CTGAAGATTTCAAGAATACTAAAggccaaaaacaaaatttcattcattCG TCATTTATACCCTATTCTTTTAGAGAGTATTGAGCTCCAAAGCACATACC GAGACCCTCATCAACCCAAACatcagaaaaacaaaaagaagccATTGGTC AGAACCACTACATGGAGGTCTGCCAGGCGGATTGCAGTTACCACAACCAA AGCTCCACCAAAGACAGCAAATGTACTTTTAAGAAGACAAGCTTCAAATC TCGCTCCATAAAAAGTGAAAGGAAATTAAGTGGCACAGTGAAGCACGCAT CATTAGTTATACTGCGATGATGTTTACGTACcattagaaaagaaaatcat tatCCACCACTTTAAACCAGACAATACCACTGAACCAGTATGACAATTGA TGCTAAAGCAATTATATAGGAGAACAGAGATTGAAGATTACATACCtcct aaaaataaatatacccaaattcaaatttgaaaacgtgACGAGTTTGCGTG AGGAGATGGAAGCAATTGATGTCTTTTAAGAAAAAGGGATACCATatgtt ttaaacaaaacaataaGTTTCAGCTTCTGCAATACTGGTGAAAAGGAGAA TGTAAACAAGGAGAATTTTCATTCTGATGAAGAAAAAGCAAAGGAACAAA CAGTAACAACTTCAAGTCAGCAAAATCAGGAAAGCATTTGCCGGACCCAT GTTTAGATGTGTTTCTAATTTGTCAAGTTACGTaatatccgccattatgg aagcaaaagTTCGATCAGCGGAAGTGATCGCCACTACAGATTTGAAAACc tgtttccataatggtggaagtCACGAAACTTAAGGAAACATGAAAACCTA TATAGCGTGTTAATGCTTATTGACTTGAAGGACACGATGATATATGCTAC TTGGTCAACATTAAGGGACAAAAACCTACATGATTCAATGTGGTTTTATC AAGTATATACAATCAAAActtatcaaaatatttacagATTCTTCattaca ataaaataaaaataatgcattaacttaagtacacgttttttataagaaca aactatgtaaaaac

Coding sequence (CDS) from alignment at scaffold_142:914951..924014+

>TCONS_00048329 ID=TCONS_00048329|Name=TCONS_00048329|organism=Clytia hemisphaerica|type=CDS|length=1728bp|location=Sequence derived from alignment at scaffold_142:914951..924014+ (Clytia hemisphaerica)
AAGATGTTCGTTCttctacaaaacatcaaaaCTCGATGTCAAATCAACCA
AACCGggaGGATAGATTTTGCAACAAGTACTGGTAAACTGTTACACATTG
AACAACATATGAAAGAATATGGCTCCACCATCATCGAACCTCGTGAAATT
CTGGTTATTGTGCAAATTGAAAACAAAGGACAACTGGGTTTGAAATATAA
TCCGCTTTTCACAGCCACAACAGAAGAAGATATCAGCCTGAAAGAGAGTA
TTGAGCTCCAAAGCACATACCGAGACCCTCATCAACCCAAACatcagaaa
aacaaaaagaagccATTGGTCAGAACCACTACATGGAGGTCTGCCAGGCG
GATTGCAGTTACCACAACCAAAGCTCCACCAAAGACAGCAAATGTACTTT
TAAGAAGACAAGCTTCAAATCTCGCTCCATAAAAGATGTTCGTTCttcta
caaaacatcaaaaCTCGATGTCAAATCAACCAAACCGggaGGATAGATTT
TGCAACAAGTACTGGTAAACTGTTACACATTGAACAACATATGAAAGAAT
ATGGCTCCACCATCATCGAACCTCGTGAAATTCTGGTTATTGTGCAAATT
GAAAACAAAGGACAACTGGGTTTGAAATATAATCCGCTTTTCACAGCCAC
AACAGAAGAAGATATCAGCCTGAAAGAGAGTATTGAGCTCCAAAGCACAT
ACCGAGACCCTCATCAACCCAAACatcagaaaaacaaaaagaagccATTG
GTCAGAACCACTACATGGAGGTCTGCCAGGCGGATTGCAGTTACCACAAC
CAAAGCTCCACCAAAGACAGCAAATGTACTTTTAAGAAGACAAGCTTCAA
ATCTCGCTCCATAAAAGATGTTCGTTCttctacaaaacatcaaaaCTCGA
TGTCAAATCAACCAAACCGggaGGATAGATTTTGCAACAAGTACTGGTAA
ACTGTTACACATTGAACAACATATGAAAGAATATGGCTCCACCATCATCG
AACCTCGTGAAATTCTGGTTATTGTGCAAATTGAAAACAAAGGACAACTG
GGTTTGAAATATAATCCGCTTTTCACAGCCACAACAGAAGAAGATATCAG
CCTGAAAGAGAGTATTGAGCTCCAAAGCACATACCGAGACCCTCATCAAC
CCAAACatcagaaaaacaaaaagaagccATTGGTCAGAACCACTACATGG
AGGTCTGCCAGGCGGATTGCAGTTACCACAACCAAAGCTCCACCAAAGAC
AGCAAATGTACTTTTAAGAAGACAAGCTTCAAATCTCGCTCCATAAAAGA
TGTTCGTTCttctacaaaacatcaaaaCTCGATGTCAAATCAACCAAACC
GggaGGATAGATTTTGCAACAAGTACTGGTAAACTGTTACACATTGAACA
ACATATGAAAGAATATGGCTCCACCATCATCGAACCTCGTGAAATTCTGG
TTATTGTGCAAATTGAAAACAAAGGACAACTGGGTTTGAAATATAATCCG
CTTTTCACAGCCACAACAGAAGAAGATATCAGCCTGAAAGAGAGTATTGA
GCTCCAAAGCACATACCGAGACCCTCATCAACCCAAACatcagaaaaaca
aaaagaagccATTGGTCAGAACCACTACATGGAGGTCTGCCAGGCGGATT
GCAGTTACCACAACCAAAGCTCCACCAAAGACAGCAAATGTACTTTTAAG
AAGACAAGCTTCAAATCTCGCTCCATAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_030757XLOC_030757Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00048329-exon-scaffold_142-1491911889:914951..915007TCONS_00048329-exon-scaffold_142-1491911889:914951..915007Clytia hemisphaericaexon
TCONS_00048329-exon-scaffold_142-1510915933:914951..915007TCONS_00048329-exon-scaffold_142-1510915933:914951..915007Clytia hemisphaericaexon
TCONS_00048329-exon-scaffold_142-1575043694:914951..915007TCONS_00048329-exon-scaffold_142-1575043694:914951..915007Clytia hemisphaericaexon
TCONS_00048329-exon-scaffold_142-1491911889:922454..922570TCONS_00048329-exon-scaffold_142-1491911889:922454..922570Clytia hemisphaericaexon
TCONS_00048329-exon-scaffold_142-1510915933:922454..922570TCONS_00048329-exon-scaffold_142-1510915933:922454..922570Clytia hemisphaericaexon
TCONS_00048329-exon-scaffold_142-1575043694:922454..922570TCONS_00048329-exon-scaffold_142-1575043694:922454..922570Clytia hemisphaericaexon
TCONS_00048329-exon-scaffold_142-1491911889:922772..922843TCONS_00048329-exon-scaffold_142-1491911889:922772..922843Clytia hemisphaericaexon
TCONS_00048329-exon-scaffold_142-1510915933:922772..922843TCONS_00048329-exon-scaffold_142-1510915933:922772..922843Clytia hemisphaericaexon
TCONS_00048329-exon-scaffold_142-1575043694:922772..922843TCONS_00048329-exon-scaffold_142-1575043694:922772..922843Clytia hemisphaericaexon
TCONS_00048329-exon-scaffold_142-1491911889:923024..924014TCONS_00048329-exon-scaffold_142-1491911889:923024..924014Clytia hemisphaericaexon
TCONS_00048329-exon-scaffold_142-1510915933:923024..924014TCONS_00048329-exon-scaffold_142-1510915933:923024..924014Clytia hemisphaericaexon
TCONS_00048329-exon-scaffold_142-1575043694:923024..924014TCONS_00048329-exon-scaffold_142-1575043694:923024..924014Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00048329-proteinTCONS_00048329-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_142supercontigscaffold_142:914951..924014 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0 0 0 0.146118 0 0 0 0.0386122 0 0 0 0 0 0 0.222442 0.135441 0 1.39145 0.085511 0.22235 0.0502274 0.0497432 0 0 0 0 0 0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00048329 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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