TCONS_00048334 (transcript) - C. hemisphaerica

Overview
NameTCONS_00048334
Unique NameTCONS_00048334
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1053

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00048334 ID=TCONS_00048334|Name=TCONS_00048334|organism=Clytia hemisphaerica|type=transcript|length=1053bp
AGCTGGAATACAAAGTTTATTCATTTGACCAAGGTCACCGGCGTTTGGCT
CGAAGCAAGGAAATTTTCACACCACGATCGATCCAGAGCAAAgcacaagt
aaaaaaaaaagaaatgacctaatttgtaatttgtaaaaattataagtttt
aaattttaactGCCAATAGTTCACAATACAAATGTAAATTTTAAGGAATT
TATAGTAATGGCCACtggtatttttcaaattgaaggaGATTTCCACAAAG
ATGGAAGCGATGAAGATGATTATGAAATTTCAGATGACattcaAGAAATG
GAGGAGATGGATCATGATCACATGATTGAAGCACTTGGTGATGATGTAGA
GAAAGTTCCACTCTGTCAAGAAACAGTCAACCCCAAAGAAAAATTGGGAC
CGTCAGATTTTGACCTTTTGAAGGTACTTGGGAAAGGTGGATATGGCAAG
gtatTCCTAGTACGCAAAAGGACAGGTCGGGATGCTGACAAAATATTTGC
AATGAAAGTCTTGAAAAAAGCAACAATTGTTCGCAATCAAAAAGACACTG
CACACACCAAAGCTGAACGGAATATATTAGAAGCAATTAAgTTCCCTTTC
ATTGTTGATCTATTATACGCATTTCAAACTGGAAAGAAACTATATTTGAT
ATTGGAGTATTTGCCAGGTGGTGAATTGTTCATGCATTTAGAGAGGGAAG
GTGTTTTCTTAGAAGATACAGCCAGTTTTTACTTAGCAGAAATTACTTTG
GCATTGGAGCATTTACATAGTGAAGGCATTATTTATAGGGATTTAAAACC
AGAGAATATTTTATTGGACCTCAAAGGTCACATCAAACTTACTGATTTTG
GTCTGTGTAAAGAATCCATTTTCCATGCAGACAGAACGCACACCTTTTGT
GGAACCATTGAGTATATggCACCTGAAGTCTTGACACGTAGTGGACATGG
CAAAGCTGTGGATTGGTGGAGCTTGGGAACCCTCATGTTTGATATGTTAA
CAGGAGCAcctccattttgttcagaaaatcgaaaaaagacccaggaaaag
gta
Run BLAST on NCBI

protein sequence of TCONS_00048334-protein

>TCONS_00048334-protein ID=TCONS_00048334-protein|Name=TCONS_00048334-protein|organism=Clytia hemisphaerica|type=polypeptide|length=282bp
MATGIFQIEGDFHKDGSDEDDYEISDDIQEMEEMDHDHMIEALGDDVEKV
PLCQETVNPKEKLGPSDFDLLKVLGKGGYGKVFLVRKRTGRDADKIFAMK
VLKKATIVRNQKDTAHTKAERNILEAIKFPFIVDLLYAFQTGKKLYLILE
YLPGGELFMHLEREGVFLEDTASFYLAEITLALEHLHSEGIIYRDLKPEN
ILLDLKGHIKLTDFGLCKESIFHADRTHTFCGTIEYMAPEVLTRSGHGKA
VDWWSLGTLMFDMLTGAPPFCSENRKKTQEKV
Run BLAST on NCBI

transcript from alignment at scaffold_142:971161..985080+

Legend: exonfive_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00048334 ID=TCONS_00048334|Name=TCONS_00048334|organism=Clytia hemisphaerica|type=transcript|length=13920bp|location=Sequence derived from alignment at scaffold_142:971161..985080+ (Clytia hemisphaerica)
AGCTGGAATACAAAGTTTATTCATTTGACCAAGGTCACCGGCGTTTGGCT
CGAAGCAAGGAAATTTTCACACCACGATCGATCCAGAGCAAAgcacaagt
aaaaaaaaaagaaatgacctaatttgtaatttgtaaaaattataagtttt
aaattttaactGCCAATAGTTCACAATACAAATGTAAATTTTAAGGAATT
TATAGTAATGGCCACtggtatttttcaaattgaaggaGATTTCCACAAAG
ATGGAAGCGATGAAGATGATTATGAAATTTCAGATGACGTGAGTTGAGTT
TGTTTgctgtttattttatttaagaGCATTAAAACAAATACCTTCATTTT
GCAtagattgggccattccagaaaaaaaaacattatcccCTAATGGAcaa
catcaatttttaaaataaattttggcacagaattccaggcaaactttagA
GTGACGAAAGTAATATCGAAATTCTATCTTAATAActttgcattaaagta
ttggaattccacGAATTTTTTAGGTTTTACAGTAACAGAATTGCACAGTT
TTtataggtattttgtaaatttgttacagAAATTCcagactttcttgaaa
gcaatttgctacgggCTACGGGCAATGGCATGGGGATTttcaggaccctg
ccgacgcaccggactgtccggtgtatttgtccggtggcaaaaagtatcct
ttcgctacaccggacgcaataagtctggTGTCAGTNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATAAGtctg
gtgtcagtccggtgttgcatacagggaattttggacgccggacatttatg
aaacaaaaaattaagaaacaccggacccACCGGACTGGCCAtttccggtg
ttttgattgtccggtgggaaaaatatccttctccgacatcggacatccga
cttccttaagttcggtgtagaaattgtccggtggtaaaaaaaattctcat
tttacaccggcctttcgcgtgtccggtgttcgttaagtccggtgcgtcgg
cagggtcctggaTTTTCATGTCgtacagggctgcaaataaatatttttag
tcaatcggacatcatgtccgacagaaatgaaatcctgtcggtcaaactca
aaatcctgtcggtcattcagtgtatatttttccagacccgatcaatcgaa
cttgtcgaaccaatcgaacaatcgaattACTCGAACTCCATCGGACCATT
aaagttcaattaaaaaaattaatcgaactctaagattttttaaaagattg
tgagtgttcgattaagttcgatcaatgggtttcggttcgatcagttcNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNaccgtatattagcttcttttcaaagccaaattcggaatgtaa
atcaggaaattacttccgataacggattacacacttttcctgtatcctta
tAGCGCCAGAGGCGgggtttgttggggcgtagtattccaccactcggccg
cgcgcgaaatcgcaacagagggggctacggactttattccggatTAGACA
AATATCTGGGTACAATAAACGTCgagctgttaagtccgggagctgtcgaa
atggcaatcacgtgccaggacaaagtttttgcaagcgagggaagatatat
gaggatttaatattatcgaactaatcgaactttttactgaccgaactaat
cgaactgctattgcttcaaaaattgtgagtgttcgattaggttcgattaa
tttttttaatcgaactttaatcgttcgatggagttcaattagttcgattg
ttcgattgatcgggtctggattTTTATATAGTTACGGAGAaagtaggaaa
aataaaagttacctttgaacagtttgttactgtatataacagagaaattg
attcgataaaagtgatcttagaaacacccttggaagttaagaagaaagca
agttgataaaagttaacttagaaacactcttgaaagttatgaagtaagca
agttgatgaaaatggtcttaaaaaaactcttgaaagttatgaagaaagcg
agtcgataaaagtttaactttgaaacacccttgaaagttacgaagaaagc
aaattgatgaaagtgatcttagaaacaaagaagtttacgaagaaagcaag
ttggcAAAAGTAATTCAGAAACACCCTTAaaagagttacaaagaaagcgg
gttgataaaagtgatcttagaaacaaagaaagtaacgaagaaagcaagtc
gataaaagttaacttagaaacaccctgaaagctacaaaggaagcgcgtat
taaaagaataggctaagtaagagacaagggtgtaagagatttattttcaa
ctctcaagttaatggtttattccttttttcattcggacatcacgaccgac
acaaaagattttcagtcggtcaaatagctttatcagtcggacattgaccg
atgaccgaCGCTTATTTCCAGCCCTGGTCGTACGTTTGGGGGTAACATAt
aaactggaatggcccattcctCTTCCTGCGCTATTGAGATTTTCTTGGCT
TTTCTAGGACTTTTCTGCTTTTTCCTGGGATAACCACCACTGTACTAAAA
AATCTTCTGCAGGCTTGCGAAACTGCCTAAAACTTTCCATCCAAAGCTTA
TTTTTTAACTACCCTGCTGGTCTTTTTCTGATCAGAAAAGTGGCCAGTTC
GGGTCAGGTTTATGAAGAGGAAAATCCAAGACTTTATGGGCTAAACTCAG
CCAATCTTTGATGTTTTTTTGGCCAAAAGAAAGTTTTGCTTTTCCTAGTT
TTGATTTTCAAGTGCTttgtttatcgcgcaatttttgcgtcacacaaaat
TTTCGTGtatattaaatttcgcgattcactaaactaggtattttcagaaa
gtgggaatataaagcaagaaaaagactgattttgcttgaaacactacgtt
tttgatgtaaaaaactaacaaagtactaagaaaaaatttttcacgtGTGT
TtgatttcgcgattttgtaattgGACACAATCAATAATATGAGACCAATT
TTGGCCTACTTGTGGACATTGATACCAtgtgttaaacttttatcaattat
ttgaaCATGTGAATATTGACAAATATTGTAGTGACCTACCTTGATAGGTT
TATACCTACCTTGATAGGTTTATGTTGAGCAAGGCAAAAGCCTCTTAGTT
GCAAGCTTGGCAGAGAGTGCAGACGTCTttcatgaagaagaagaaatagt
TGTAAGAACTGAACTTTACCTTGTCAATTATTTGTGTCACTCCCTGTTTG
TTGACCCCCAAGCAATTCGACTAAGTGGGTACTACAAATATCAGTGGATA
TGGTatcttcaaaaattgataaatcttTAACACTGTTGAGATCCTGTGTC
ACAATGATCAAATCAAGATAACTTATTAACACCTAAAGTGAtgacaaaaa
aatgataaaaaattaacaaggtctattttttggaaatgataaaaaatagt
ctaaaactttaatttgaccttgaaattgaaaatcctttggacATACCAAA
AAtgtgataattttttatcaaatttgacaGGTTTCAggctcaaaaacaat
gaaatgataattttttatcagattgaagttcaaaacttggtaatttttat
cataaatttgtTGGAAACTGCCAAAATTTGGGTCGTTTATTTTTaactct
ttgttttgatacaTATCTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNTACATATCTCTTTAAACTATACGCAGAACTACAATTTCGAATAACTT
GaacaaaaatagataaaaacttAACCAAAACTAGTATGTACTTGTAAATA
TTACACTAATTAAGTTTAAGTagtgtgttaaaatattatcaaaattgaca
taaatcgttaaaaaatgaccaattgtttgcatattaacaaaatcttgagt
atcaatgGAGCGAAATCAGAACAAGATAGAATTCAAATGATAAAATGTTA
ACAGACAATAGAAGAgaagataatattttaacaatatACTTTCTGTTATT
ATAGTTTTATTAGTCTTTGCCACTTAAGGATActtaattaaaactttcaa
aatgctCAAGAAGCTGATCTGCAACCTAATTAAAAACACCCTAGAAACTA
GAATAAATCAAACACCAATattaacaaaaatactgataaaatattaacaa
aatactaaacAGAACTAACGTGAAACACTATAACAACGTTTTCTCCAAAT
CTAGAGTACttacaaattacaaattttCATATTCTATTATCCTGAAACGT
TGCATCCGCATATCTTATAAAATTCATTTCTGCAATTTAGTTTCACTAAT
TTAAAGTTTTGGAACCCTGATTTGAAACCCAAAAATTGCCCCAAATTGAC
TTAAAACttgatatcttatattttttcCTTGCTAAGATAAGttcaatttt
tgccaaaattgttaaaaatttatcaCTTTTGTGTCCAAAATGCATGCAAC
AATCGTTATTTCTATCTGATAAATTCACTTTCTCATTAAATCTAATTTAC
TAGATTCCAACAGCAGCAAACCATTTTCGTAATTTCCTGAGTGTACCAGT
GTTAcaaatttatcaatattttgttaacgctctgataaattttgtaaata
tttaatATATGGCTAAATTAAACATAgcaataaattatttttcattttgg
gggatttcagactttttagactttcattgaaTTGATAAGATGttaacaat
gttaattttttatcatatctttgtcaaaaatgaagtttttaattttttaa
atatttaaagaaCGTATTAATATCTAACTTCTGTTAAATTTTCGACCCAT
gacaattaaaattcagaaacttattaacaaaacaaatttttggacaattt
tatgATGTCCACAATGTTGTCTCATATTATTGATTGTCTCATATTATTGA
TCGtgtccaattttgaaaaatttaaacagtattaaattttgcgaaaattg
agcaaaaaactcgcgaaattaagtacccgcgaaaatttgtaacatgcgaa
aatatataccaataaggtatgcattgtcaaatttggttctccattgttcA
TACCAGTTCATACTGTCCTGTACTGTCAATTGTAAGGATCGATGGTGATG
TCACCTAAGAATAATACAGAAAAAATTTCGTCAATTTTATGCATATATAT
TGATTTgcaagatattctattcgccgcgcaAACGCCAGGCAGTCCAAGCC
TtgattttcctaggggttttggtTCATTTCTCAGATTTTCAGGGGGTTAT
Tagttaccgtgagattgggtaacttgcatcagtggaggctaacatgcata
gccctcaaatgaaagacttggctggtcattaaaatacaactacgcagcac
TGCTCGCAgttctactctaccatttttgttttgatttaattttgtatttt
aatgaccagccaggtctttcatttgagggctatgtctccactgatgcaag
ttacccaatctcaagGTATTACAGGTTTCCAGGTGGTTCTCTCCTCTAAA
CTGACATCAATACACAATAGTCATTTTCCAGGcccttttcacaaaatttc
aggggataatttccaggggataatttgttatccaaaatttccaggaggGG
GGTTGGtgagaaaattttgtgaatacccctgtacaatttttttttgaata
gccCATTGATggtaatttttcatcttcgttattttccaaatgaagcacaa
ccaaaAAACCCAAcccaatcgaatctcaattgaatatgaaaattgcattc
aattgcGTTTGGGGATGGTATTTGCAATTAATCATTGCATTCCATTTGgt
taaatttgttttgaaagtctGTTCCATTCGATTGATATGATCTGGAAAAA
TATCAGTTTACAGGGAAAGTTTTCTGCCTTTGAATATTGTTTATGAACAt
ggacaaaacattttttgacacCTGTATTTTtgtgagggaaaaagttctct
TTACAGCCAGATGAAGTATGTTTcacttttggtataaaaaaggtttgatt
ttttttcttcagattcaAGAAATGGAGGAGATGGATCATGATCACATGTG
AGTTCAAACAGTTCCTTTTTTTGAATTCATATCCTTCATTCATTCAGGCA
AATTTCCAGGAGTTGGAGCTGCTAccatttttaatcaaaagattgAGTTT
CAGAATGTGCCTTAGGCTTGAAAAAAGCAGACAGGAGGTCTAGGGCCTTG
TAAACAGCCCAATCAACTGGTCCAGGACAGTCCTGGTGTGGTCTATGGGG
CAAAGCCCCAAGAAAATGATGCCTTTTTGCGGAATTTTAAGTGCTATAAT
TAATATCAATACAATTTTGACTCAAATATCACAAAAGTTGGGATAGtcga
tttcaatttaatttttttttgccttagGATTGAAGCACTTGGTGATGATG
TAGAGAAAGTTCCACTCTGTCAAGAAACAGTCAACCCCAAAGAAAAATTG
GGACCGTCAGATTTTGACCTTTTGAAGGTACTTGGGAAAGGTGGATATGG
CAAGGTAATTATAATTGATGATTGTTGTAGAGTCAATTTCCTTACTCAGT
AGGGGATGCAGAATTAGAAATTATGCCCCTGACTATTTTCTATTTGTTTA
TGGTTTGCTTTTAGTCAAGAAGATTTAACATGtatttaaaactaaaattt
ttaattaagcATTGATGACTTATAAAAACAAGGGTTCTAttgcttttatt
ttattttatttttcaggtatTCCTAGTACGCAAAAGGACAGGTCGGGATG
CTGACAAAATATTTGCAATGAAAGTCTTGAAAAAAGCAACAATTGTTCGC
AATCAAAAAGACACTGCACACACCAAAGCTGAACGGAATATATTAGAAGC
AATTAAggtaattagtttttatctTGTACTGGTCAATGAAGCTTTAATTA
CCCAAATCATCTGAAATCTCTAGTAACTACTGTAAGGttataaaaacatg
ttttttaaaggtctttttttttccttcctcAGTTCCCTTTCATTGTTGAT
CTATTATACGCATTTCAAACTGGAAAGAAACTATATTTGATATTGGAGTA
TTTGCCAGGTAAGACGTTCTGGTACATTTGTTTAGTCTTGTATCTATCTT
ATCTtcgtaatttttttactttgagaAAGATAAACATTCCTGACATTTTT
CAGAAATTCCACACATAGCTGTCAAAGTGTTGACATTGCTGTCACAAGTC
AAATAAAACAGTCTTTCTCAGTATTTGagaagtgaaagaaaaaatcgtTA
AAACTGACAATTCTAAATTAGATTCTGTGATTTCAGCTAGATTTCCAGCT
CCAGTTAAAACTTGAATCAACTTTGtgtatttccaaaaaaataaatatta
aaatgaaaatattatgtTATCACTTAACACCCCTGCCAATTCTATAAATA
TACAGtacactctctctaattcgagcttTATAGGTAttataaattttctt
tgaattataaaaagatttgGATTACAGAATGTATATTACACCACTTTCCA
GTGGAGGGGACCATTATAGTGAGGttgtttagcataatttacggggaaaa
aataagatctagctgaaactttctccagactttctttataggatggttat
gcctcaggatcccctaaaatcccactgatggaacatcccttttttgggac
atttcttttttcccaaggcaaaaccctaagcagacattatcaagtatacc
atttgaaagctcttgaaaaactatatagaagacttttaaacgggtatagc
cgatttcattacctaactcaagataattcacacaagatgctatttatgca
gatttatggtcaattttagaccaaaatgtggcgaaaagtggaacttgcgg
gGTCatcagtgggattttaggggattttttcctgaggtataagcacaagc
atcctatagagaaggttaGGAGAAAGTTTtaactaccttattggaactaa
ttttcgcgggttttaattttagcgtttttcgcggtttttcatcaaaatcg
cgaaaatttgatcccgcgaaaaattttgagagttgaaaaccgcgaaaatt
aattcccgcgaaataaatttttgccaattttatcgaaaaatttgaaaaat
ccctgcgaaaatgaaagaaatttgtccaaaaaagggcaaaaccgcgaaaa
ttaaaacccgcgaaaattccagaatggaaaaaaccgcgaaaattagaacC
CGCGAAATGTAATTTTTCGGAtaatttttttcgaccgcgaaaattagttc
ccgcgaaaattagttccaataaggtagatcttatttttctcctacaaaca
gcctatatttttgtaacacaCCACACTATTAGCTTAGTttcaaattacag
aaatattcgaaaaatagaggtttgaattagagagagttgactgaaCTATG
TATAGATCTGTAGATATGTATAGATGGACAAAATTACTTCTTCTTATCTA
GGTGGTGAATTGTTCATGCATTTAGAGAGGGAAGGTGTTTTCTTAGAAGA
TACAGCCAGGTATATCTTAGTGATACTATTCCAATGAGAAAATATGACAT
GTGCACCGGCTCTTCAATTAGGTTTTTTACTTTAACTGGTCAGAACTATG
AAATCAAGCTTTAGTTATCAAAAAGGTTTTTGTATTCCCCTACTTTTGTA
CATCAAATCTTTAATGgggttgtgttttttttttctagataATTCATATG
TATGTatattaaatttaaaaagtattcCTTCTTTTCCTTTTCAGTTTTTA
CTTAGCAGAAATTACTTTGGCATTGGAGCATTTACATAGTGAAGGCATTA
TTTATAGGTAATTCCAAGAACActatatttttctttatcaaattatTACA
AATTTGAGATCAAACAAATATGTGATTACCTGTCttcttttatttgactt
tttctcaACTCTCTTTTCAGGGATTTAAAACCAGAGAATATTTTATTGGA
CCTCAAAGGTCACATCAAACTTACTGATTTTGGTCTGTGTAAAGAATCCA
TTTTCCATGCAGACAGAACGCACACCTTTTGTGGAACCATTGAGTATATG
TAAGAACCGGATTAACTTAAATTTTTAGATTGATTGACTTTTCTTTGACA
CTTCTCGGCTAAAGTGATCTCTTTGGTTTTAATTAGAATAATTGCTTATG
AAATGGATGGAAAGTTTATGAATAAGAATGACATGTAagcaaaattatta
aaaaagatgCTATagtatgaaaaattaaattttagagTTAGTGTTTTCCC
CAAAAAGGGGATTTTTTAGCGCAATTTtctgcaattttagcgattttaag
tctaGGTCCGGTAACAGgacttttaaaaaacaaaagtcgtctggttttaa
aaaaaaattaaaaatttttggttcttttttatcaaaatagggCACCTGAA
GTCTTGACACGTAGTGGACATGGCAAAGCTGTGGATTGGTGGAGCTTGGG
AACCCTCATGTTTGATATGTTAACAGGAGCAGTAAGTGTACATCTTTGAA
TACTTTGAATGACTGTTTGAAGTTTTTTGccatatttttctatttttttt
gcctaggttttttttattaaacCATTATTGTCACATTAACTTGTAATCAC
CATATTCTTTGCCAATACTAGGATATCAAAGTGATATACTCTGCAGAACA
AATTACAAAATATTACAAACGGGTTTTGCTTATTTACGATAATAATATTA
CACTACGTCGCTGTAATTGACAACTGAATATTCGTCActaccaaaattag
ttcttgtaATATCAGCTCTTACAGTTTCCATATACATACATGTaactgaa
atatattttttttcagcctccattttgttcagaaaatcgaaaaaagaccc
aggaaaaggtactgTTAAACTCGTGAAAAACATTCTTACACTACCTGATT
GCGAATTCCTCTATGATCTTTCATATCCTTCAGTTTGAGCTTTTTTGATT
GGATAATGTTGAGTCTAAGTTtgatcagggggggggtcggtagtaaaatc
tcagacataatgacatttactacggtggtggtgtgatgaaaaatcgaaaa
aaaaatttactcccCAGGGtttttaaatactaaaatgggtggtatctatg
tgttaaatattgaaaagattttactacctgggtagttaaaactggtaaaa
ttagcaaattttagctatttttgtaattcttttaattttttgggtgactt
ttctgaaaaaatNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NAAAATTAGTTCTTGTAATATCAGCTCTTACAGTTTCCATATACATACAT
GTaactgaaatatattttttttcagcctccattttgttcagaaaatcgaa
aaaagacccaggaaaaggta

Coding sequence (CDS) from alignment at scaffold_142:971161..985080+

>TCONS_00048334 ID=TCONS_00048334|Name=TCONS_00048334|organism=Clytia hemisphaerica|type=CDS|length=8460bp|location=Sequence derived from alignment at scaffold_142:971161..985080+ (Clytia hemisphaerica)
ATGGCCACtggtatttttcaaattgaaggaGATTTCCACAAAGATGGAAG
CGATGAAGATGATTATGAAATTTCAGATGACattcaAGAAATGGAGGAGA
TGGATCATGATCACATGATTGAAGCACTTGGTGATGATGTAGAGAAAGTT
CCACTCTGTCAAGAAACAGTCAACCCCAAAGAAAAATTGGGACCGTCAGA
TTTTGACCTTTTGAAGGTACTTGGGAAAGGTGGATATGGCAAGgtatTCC
TAGTACGCAAAAGGACAGGTCGGGATGCTGACAAAATATTTGCAATGAAA
GTCTTGAAAAAAGCAACAATTGTTCGCAATCAAAAAGACACTGCACACAC
CAAAGCTGAACGGAATATATTAGAAGCAATTAAgTTCCCTTTCATTGTTG
ATCTATTATACGCATTTCAAACTGGAAAGAAACTATATTTGATATTGGAG
TATTTGCCAGGTGGTGAATTGTTCATGCATTTAGAGAGGGAAGGTGTTTT
CTTAGAAGATACAGCCAGTTTTTACTTAGCAGAAATTACTTTGGCATTGG
AGCATTTACATAGTGAAGGCATTATTTATAGGGATTTAAAACCAGAGAAT
ATTTTATTGGACCTCAAAGGTCACATCAAACTTACTGATTTTGGTCTGTG
TAAAGAATCCATTTTCCATGCAGACAGAACGCACACCTTTTGTGGAACCA
TTGAGTATATggCACCTGAAGTCTTGACACGTAGTGGACATGGCAAAGCT
GTGGATTGGTGGAGCTTGGGAACCCTCATGTTTGATATGTTAACAGGAGC
AcctccattttgttcagaaaatcgaaaaaagacccaggaaaaggtaATGG
CCACtggtatttttcaaattgaaggaGATTTCCACAAAGATGGAAGCGAT
GAAGATGATTATGAAATTTCAGATGACattcaAGAAATGGAGGAGATGGA
TCATGATCACATGATTGAAGCACTTGGTGATGATGTAGAGAAAGTTCCAC
TCTGTCAAGAAACAGTCAACCCCAAAGAAAAATTGGGACCGTCAGATTTT
GACCTTTTGAAGGTACTTGGGAAAGGTGGATATGGCAAGgtatTCCTAGT
ACGCAAAAGGACAGGTCGGGATGCTGACAAAATATTTGCAATGAAAGTCT
TGAAAAAAGCAACAATTGTTCGCAATCAAAAAGACACTGCACACACCAAA
GCTGAACGGAATATATTAGAAGCAATTAAgTTCCCTTTCATTGTTGATCT
ATTATACGCATTTCAAACTGGAAAGAAACTATATTTGATATTGGAGTATT
TGCCAGGTGGTGAATTGTTCATGCATTTAGAGAGGGAAGGTGTTTTCTTA
GAAGATACAGCCAGTTTTTACTTAGCAGAAATTACTTTGGCATTGGAGCA
TTTACATAGTGAAGGCATTATTTATAGGGATTTAAAACCAGAGAATATTT
TATTGGACCTCAAAGGTCACATCAAACTTACTGATTTTGGTCTGTGTAAA
GAATCCATTTTCCATGCAGACAGAACGCACACCTTTTGTGGAACCATTGA
GTATATggCACCTGAAGTCTTGACACGTAGTGGACATGGCAAAGCTGTGG
ATTGGTGGAGCTTGGGAACCCTCATGTTTGATATGTTAACAGGAGCAcct
ccattttgttcagaaaatcgaaaaaagacccaggaaaaggtaATGGCCAC
tggtatttttcaaattgaaggaGATTTCCACAAAGATGGAAGCGATGAAG
ATGATTATGAAATTTCAGATGACattcaAGAAATGGAGGAGATGGATCAT
GATCACATGATTGAAGCACTTGGTGATGATGTAGAGAAAGTTCCACTCTG
TCAAGAAACAGTCAACCCCAAAGAAAAATTGGGACCGTCAGATTTTGACC
TTTTGAAGGTACTTGGGAAAGGTGGATATGGCAAGgtatTCCTAGTACGC
AAAAGGACAGGTCGGGATGCTGACAAAATATTTGCAATGAAAGTCTTGAA
AAAAGCAACAATTGTTCGCAATCAAAAAGACACTGCACACACCAAAGCTG
AACGGAATATATTAGAAGCAATTAAgTTCCCTTTCATTGTTGATCTATTA
TACGCATTTCAAACTGGAAAGAAACTATATTTGATATTGGAGTATTTGCC
AGGTGGTGAATTGTTCATGCATTTAGAGAGGGAAGGTGTTTTCTTAGAAG
ATACAGCCAGTTTTTACTTAGCAGAAATTACTTTGGCATTGGAGCATTTA
CATAGTGAAGGCATTATTTATAGGGATTTAAAACCAGAGAATATTTTATT
GGACCTCAAAGGTCACATCAAACTTACTGATTTTGGTCTGTGTAAAGAAT
CCATTTTCCATGCAGACAGAACGCACACCTTTTGTGGAACCATTGAGTAT
ATggCACCTGAAGTCTTGACACGTAGTGGACATGGCAAAGCTGTGGATTG
GTGGAGCTTGGGAACCCTCATGTTTGATATGTTAACAGGAGCAcctccat
tttgttcagaaaatcgaaaaaagacccaggaaaaggtaATGGCCACtggt
atttttcaaattgaaggaGATTTCCACAAAGATGGAAGCGATGAAGATGA
TTATGAAATTTCAGATGACattcaAGAAATGGAGGAGATGGATCATGATC
ACATGATTGAAGCACTTGGTGATGATGTAGAGAAAGTTCCACTCTGTCAA
GAAACAGTCAACCCCAAAGAAAAATTGGGACCGTCAGATTTTGACCTTTT
GAAGGTACTTGGGAAAGGTGGATATGGCAAGgtatTCCTAGTACGCAAAA
GGACAGGTCGGGATGCTGACAAAATATTTGCAATGAAAGTCTTGAAAAAA
GCAACAATTGTTCGCAATCAAAAAGACACTGCACACACCAAAGCTGAACG
GAATATATTAGAAGCAATTAAgTTCCCTTTCATTGTTGATCTATTATACG
CATTTCAAACTGGAAAGAAACTATATTTGATATTGGAGTATTTGCCAGGT
GGTGAATTGTTCATGCATTTAGAGAGGGAAGGTGTTTTCTTAGAAGATAC
AGCCAGTTTTTACTTAGCAGAAATTACTTTGGCATTGGAGCATTTACATA
GTGAAGGCATTATTTATAGGGATTTAAAACCAGAGAATATTTTATTGGAC
CTCAAAGGTCACATCAAACTTACTGATTTTGGTCTGTGTAAAGAATCCAT
TTTCCATGCAGACAGAACGCACACCTTTTGTGGAACCATTGAGTATATgg
CACCTGAAGTCTTGACACGTAGTGGACATGGCAAAGCTGTGGATTGGTGG
AGCTTGGGAACCCTCATGTTTGATATGTTAACAGGAGCAcctccattttg
ttcagaaaatcgaaaaaagacccaggaaaaggtaATGGCCACtggtattt
ttcaaattgaaggaGATTTCCACAAAGATGGAAGCGATGAAGATGATTAT
GAAATTTCAGATGACattcaAGAAATGGAGGAGATGGATCATGATCACAT
GATTGAAGCACTTGGTGATGATGTAGAGAAAGTTCCACTCTGTCAAGAAA
CAGTCAACCCCAAAGAAAAATTGGGACCGTCAGATTTTGACCTTTTGAAG
GTACTTGGGAAAGGTGGATATGGCAAGgtatTCCTAGTACGCAAAAGGAC
AGGTCGGGATGCTGACAAAATATTTGCAATGAAAGTCTTGAAAAAAGCAA
CAATTGTTCGCAATCAAAAAGACACTGCACACACCAAAGCTGAACGGAAT
ATATTAGAAGCAATTAAgTTCCCTTTCATTGTTGATCTATTATACGCATT
TCAAACTGGAAAGAAACTATATTTGATATTGGAGTATTTGCCAGGTGGTG
AATTGTTCATGCATTTAGAGAGGGAAGGTGTTTTCTTAGAAGATACAGCC
AGTTTTTACTTAGCAGAAATTACTTTGGCATTGGAGCATTTACATAGTGA
AGGCATTATTTATAGGGATTTAAAACCAGAGAATATTTTATTGGACCTCA
AAGGTCACATCAAACTTACTGATTTTGGTCTGTGTAAAGAATCCATTTTC
CATGCAGACAGAACGCACACCTTTTGTGGAACCATTGAGTATATggCACC
TGAAGTCTTGACACGTAGTGGACATGGCAAAGCTGTGGATTGGTGGAGCT
TGGGAACCCTCATGTTTGATATGTTAACAGGAGCAcctccattttgttca
gaaaatcgaaaaaagacccaggaaaaggtaATGGCCACtggtatttttca
aattgaaggaGATTTCCACAAAGATGGAAGCGATGAAGATGATTATGAAA
TTTCAGATGACattcaAGAAATGGAGGAGATGGATCATGATCACATGATT
GAAGCACTTGGTGATGATGTAGAGAAAGTTCCACTCTGTCAAGAAACAGT
CAACCCCAAAGAAAAATTGGGACCGTCAGATTTTGACCTTTTGAAGGTAC
TTGGGAAAGGTGGATATGGCAAGgtatTCCTAGTACGCAAAAGGACAGGT
CGGGATGCTGACAAAATATTTGCAATGAAAGTCTTGAAAAAAGCAACAAT
TGTTCGCAATCAAAAAGACACTGCACACACCAAAGCTGAACGGAATATAT
TAGAAGCAATTAAgTTCCCTTTCATTGTTGATCTATTATACGCATTTCAA
ACTGGAAAGAAACTATATTTGATATTGGAGTATTTGCCAGGTGGTGAATT
GTTCATGCATTTAGAGAGGGAAGGTGTTTTCTTAGAAGATACAGCCAGTT
TTTACTTAGCAGAAATTACTTTGGCATTGGAGCATTTACATAGTGAAGGC
ATTATTTATAGGGATTTAAAACCAGAGAATATTTTATTGGACCTCAAAGG
TCACATCAAACTTACTGATTTTGGTCTGTGTAAAGAATCCATTTTCCATG
CAGACAGAACGCACACCTTTTGTGGAACCATTGAGTATATggCACCTGAA
GTCTTGACACGTAGTGGACATGGCAAAGCTGTGGATTGGTGGAGCTTGGG
AACCCTCATGTTTGATATGTTAACAGGAGCAcctccattttgttcagaaa
atcgaaaaaagacccaggaaaaggtaATGGCCACtggtatttttcaaatt
gaaggaGATTTCCACAAAGATGGAAGCGATGAAGATGATTATGAAATTTC
AGATGACattcaAGAAATGGAGGAGATGGATCATGATCACATGATTGAAG
CACTTGGTGATGATGTAGAGAAAGTTCCACTCTGTCAAGAAACAGTCAAC
CCCAAAGAAAAATTGGGACCGTCAGATTTTGACCTTTTGAAGGTACTTGG
GAAAGGTGGATATGGCAAGgtatTCCTAGTACGCAAAAGGACAGGTCGGG
ATGCTGACAAAATATTTGCAATGAAAGTCTTGAAAAAAGCAACAATTGTT
CGCAATCAAAAAGACACTGCACACACCAAAGCTGAACGGAATATATTAGA
AGCAATTAAgTTCCCTTTCATTGTTGATCTATTATACGCATTTCAAACTG
GAAAGAAACTATATTTGATATTGGAGTATTTGCCAGGTGGTGAATTGTTC
ATGCATTTAGAGAGGGAAGGTGTTTTCTTAGAAGATACAGCCAGTTTTTA
CTTAGCAGAAATTACTTTGGCATTGGAGCATTTACATAGTGAAGGCATTA
TTTATAGGGATTTAAAACCAGAGAATATTTTATTGGACCTCAAAGGTCAC
ATCAAACTTACTGATTTTGGTCTGTGTAAAGAATCCATTTTCCATGCAGA
CAGAACGCACACCTTTTGTGGAACCATTGAGTATATggCACCTGAAGTCT
TGACACGTAGTGGACATGGCAAAGCTGTGGATTGGTGGAGCTTGGGAACC
CTCATGTTTGATATGTTAACAGGAGCAcctccattttgttcagaaaatcg
aaaaaagacccaggaaaaggtaATGGCCACtggtatttttcaaattgaag
gaGATTTCCACAAAGATGGAAGCGATGAAGATGATTATGAAATTTCAGAT
GACattcaAGAAATGGAGGAGATGGATCATGATCACATGATTGAAGCACT
TGGTGATGATGTAGAGAAAGTTCCACTCTGTCAAGAAACAGTCAACCCCA
AAGAAAAATTGGGACCGTCAGATTTTGACCTTTTGAAGGTACTTGGGAAA
GGTGGATATGGCAAGgtatTCCTAGTACGCAAAAGGACAGGTCGGGATGC
TGACAAAATATTTGCAATGAAAGTCTTGAAAAAAGCAACAATTGTTCGCA
ATCAAAAAGACACTGCACACACCAAAGCTGAACGGAATATATTAGAAGCA
ATTAAgTTCCCTTTCATTGTTGATCTATTATACGCATTTCAAACTGGAAA
GAAACTATATTTGATATTGGAGTATTTGCCAGGTGGTGAATTGTTCATGC
ATTTAGAGAGGGAAGGTGTTTTCTTAGAAGATACAGCCAGTTTTTACTTA
GCAGAAATTACTTTGGCATTGGAGCATTTACATAGTGAAGGCATTATTTA
TAGGGATTTAAAACCAGAGAATATTTTATTGGACCTCAAAGGTCACATCA
AACTTACTGATTTTGGTCTGTGTAAAGAATCCATTTTCCATGCAGACAGA
ACGCACACCTTTTGTGGAACCATTGAGTATATggCACCTGAAGTCTTGAC
ACGTAGTGGACATGGCAAAGCTGTGGATTGGTGGAGCTTGGGAACCCTCA
TGTTTGATATGTTAACAGGAGCAcctccattttgttcagaaaatcgaaaa
aagacccaggaaaaggtaATGGCCACtggtatttttcaaattgaaggaGA
TTTCCACAAAGATGGAAGCGATGAAGATGATTATGAAATTTCAGATGACa
ttcaAGAAATGGAGGAGATGGATCATGATCACATGATTGAAGCACTTGGT
GATGATGTAGAGAAAGTTCCACTCTGTCAAGAAACAGTCAACCCCAAAGA
AAAATTGGGACCGTCAGATTTTGACCTTTTGAAGGTACTTGGGAAAGGTG
GATATGGCAAGgtatTCCTAGTACGCAAAAGGACAGGTCGGGATGCTGAC
AAAATATTTGCAATGAAAGTCTTGAAAAAAGCAACAATTGTTCGCAATCA
AAAAGACACTGCACACACCAAAGCTGAACGGAATATATTAGAAGCAATTA
AgTTCCCTTTCATTGTTGATCTATTATACGCATTTCAAACTGGAAAGAAA
CTATATTTGATATTGGAGTATTTGCCAGGTGGTGAATTGTTCATGCATTT
AGAGAGGGAAGGTGTTTTCTTAGAAGATACAGCCAGTTTTTACTTAGCAG
AAATTACTTTGGCATTGGAGCATTTACATAGTGAAGGCATTATTTATAGG
GATTTAAAACCAGAGAATATTTTATTGGACCTCAAAGGTCACATCAAACT
TACTGATTTTGGTCTGTGTAAAGAATCCATTTTCCATGCAGACAGAACGC
ACACCTTTTGTGGAACCATTGAGTATATggCACCTGAAGTCTTGACACGT
AGTGGACATGGCAAAGCTGTGGATTGGTGGAGCTTGGGAACCCTCATGTT
TGATATGTTAACAGGAGCAcctccattttgttcagaaaatcgaaaaaaga
cccaggaaaaggtaATGGCCACtggtatttttcaaattgaaggaGATTTC
CACAAAGATGGAAGCGATGAAGATGATTATGAAATTTCAGATGACattca
AGAAATGGAGGAGATGGATCATGATCACATGATTGAAGCACTTGGTGATG
ATGTAGAGAAAGTTCCACTCTGTCAAGAAACAGTCAACCCCAAAGAAAAA
TTGGGACCGTCAGATTTTGACCTTTTGAAGGTACTTGGGAAAGGTGGATA
TGGCAAGgtatTCCTAGTACGCAAAAGGACAGGTCGGGATGCTGACAAAA
TATTTGCAATGAAAGTCTTGAAAAAAGCAACAATTGTTCGCAATCAAAAA
GACACTGCACACACCAAAGCTGAACGGAATATATTAGAAGCAATTAAgTT
CCCTTTCATTGTTGATCTATTATACGCATTTCAAACTGGAAAGAAACTAT
ATTTGATATTGGAGTATTTGCCAGGTGGTGAATTGTTCATGCATTTAGAG
AGGGAAGGTGTTTTCTTAGAAGATACAGCCAGTTTTTACTTAGCAGAAAT
TACTTTGGCATTGGAGCATTTACATAGTGAAGGCATTATTTATAGGGATT
TAAAACCAGAGAATATTTTATTGGACCTCAAAGGTCACATCAAACTTACT
GATTTTGGTCTGTGTAAAGAATCCATTTTCCATGCAGACAGAACGCACAC
CTTTTGTGGAACCATTGAGTATATggCACCTGAAGTCTTGACACGTAGTG
GACATGGCAAAGCTGTGGATTGGTGGAGCTTGGGAACCCTCATGTTTGAT
ATGTTAACAGGAGCAcctccattttgttcagaaaatcgaaaaaagaccca
ggaaaaggta
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_030759XLOC_030759Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00048334-proteinTCONS_00048334-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00048334-exon-scaffold_142-1491911889:971161..971448TCONS_00048334-exon-scaffold_142-1491911889:971161..971448Clytia hemisphaericaexon
TCONS_00048334-exon-scaffold_142-1510915933:971161..971448TCONS_00048334-exon-scaffold_142-1510915933:971161..971448Clytia hemisphaericaexon
TCONS_00048334-exon-scaffold_142-1575043694:971161..971448TCONS_00048334-exon-scaffold_142-1575043694:971161..971448Clytia hemisphaericaexon
TCONS_00048334-exon-scaffold_142-1491911889:977523..977557TCONS_00048334-exon-scaffold_142-1491911889:977523..977557Clytia hemisphaericaexon
TCONS_00048334-exon-scaffold_142-1510915933:977523..977557TCONS_00048334-exon-scaffold_142-1510915933:977523..977557Clytia hemisphaericaexon
TCONS_00048334-exon-scaffold_142-1575043694:977523..977557TCONS_00048334-exon-scaffold_142-1575043694:977523..977557Clytia hemisphaericaexon
TCONS_00048334-exon-scaffold_142-1491911889:977888..978014TCONS_00048334-exon-scaffold_142-1491911889:977888..978014Clytia hemisphaericaexon
TCONS_00048334-exon-scaffold_142-1510915933:977888..978014TCONS_00048334-exon-scaffold_142-1510915933:977888..978014Clytia hemisphaericaexon
TCONS_00048334-exon-scaffold_142-1575043694:977888..978014TCONS_00048334-exon-scaffold_142-1575043694:977888..978014Clytia hemisphaericaexon
TCONS_00048334-exon-scaffold_142-1491911889:978227..978367TCONS_00048334-exon-scaffold_142-1491911889:978227..978367Clytia hemisphaericaexon
TCONS_00048334-exon-scaffold_142-1510915933:978227..978367TCONS_00048334-exon-scaffold_142-1510915933:978227..978367Clytia hemisphaericaexon
TCONS_00048334-exon-scaffold_142-1575043694:978227..978367TCONS_00048334-exon-scaffold_142-1575043694:978227..978367Clytia hemisphaericaexon
TCONS_00048334-exon-scaffold_142-1491911889:978493..978568TCONS_00048334-exon-scaffold_142-1491911889:978493..978568Clytia hemisphaericaexon
TCONS_00048334-exon-scaffold_142-1510915933:978493..978568TCONS_00048334-exon-scaffold_142-1510915933:978493..978568Clytia hemisphaericaexon
TCONS_00048334-exon-scaffold_142-1575043694:978493..978568TCONS_00048334-exon-scaffold_142-1575043694:978493..978568Clytia hemisphaericaexon
TCONS_00048334-exon-scaffold_142-1491911889:979962..980019TCONS_00048334-exon-scaffold_142-1491911889:979962..980019Clytia hemisphaericaexon
TCONS_00048334-exon-scaffold_142-1510915933:979962..980019TCONS_00048334-exon-scaffold_142-1510915933:979962..980019Clytia hemisphaericaexon
TCONS_00048334-exon-scaffold_142-1575043694:979962..980019TCONS_00048334-exon-scaffold_142-1575043694:979962..980019Clytia hemisphaericaexon
TCONS_00048334-exon-scaffold_142-1491911889:980255..980317TCONS_00048334-exon-scaffold_142-1491911889:980255..980317Clytia hemisphaericaexon
TCONS_00048334-exon-scaffold_142-1510915933:980255..980317TCONS_00048334-exon-scaffold_142-1510915933:980255..980317Clytia hemisphaericaexon
TCONS_00048334-exon-scaffold_142-1575043694:980255..980317TCONS_00048334-exon-scaffold_142-1575043694:980255..980317Clytia hemisphaericaexon
TCONS_00048334-exon-scaffold_142-1491911889:980431..980559TCONS_00048334-exon-scaffold_142-1491911889:980431..980559Clytia hemisphaericaexon
TCONS_00048334-exon-scaffold_142-1510915933:980431..980559TCONS_00048334-exon-scaffold_142-1510915933:980431..980559Clytia hemisphaericaexon
TCONS_00048334-exon-scaffold_142-1575043694:980431..980559TCONS_00048334-exon-scaffold_142-1575043694:980431..980559Clytia hemisphaericaexon
TCONS_00048334-exon-scaffold_142-1491911889:980901..980991TCONS_00048334-exon-scaffold_142-1491911889:980901..980991Clytia hemisphaericaexon
TCONS_00048334-exon-scaffold_142-1510915933:980901..980991TCONS_00048334-exon-scaffold_142-1510915933:980901..980991Clytia hemisphaericaexon
TCONS_00048334-exon-scaffold_142-1575043694:980901..980991TCONS_00048334-exon-scaffold_142-1575043694:980901..980991Clytia hemisphaericaexon
TCONS_00048334-exon-scaffold_142-1491911889:985036..985080TCONS_00048334-exon-scaffold_142-1491911889:985036..985080Clytia hemisphaericaexon
TCONS_00048334-exon-scaffold_142-1510915933:985036..985080TCONS_00048334-exon-scaffold_142-1510915933:985036..985080Clytia hemisphaericaexon
TCONS_00048334-exon-scaffold_142-1575043694:985036..985080TCONS_00048334-exon-scaffold_142-1575043694:985036..985080Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_142supercontigscaffold_142:971161..985080 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
6.3263	5.98468	4.18831	3.28274	35.9395	28.1759	24.0221	26.5367	16.7902	20.8631	18.4829	11.3801	16.019	13.7906	11.6361	13.7169	22.2468	23.061	12.3776	19.8726	22.6579	24.6509	20.8692	22.4128	26.0859	27.7117	31.2402	24.3594	32.7057	33.8924
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000719Prot_kinase_dom
IPR017441Protein_kinase_ATP_BS
IPR008271Ser/Thr_kinase_AS
IPR011009Kinase-like_dom
Vocabulary: Molecular Function
TermDefinition
GO:0004672protein kinase activity
GO:0005524ATP binding
Vocabulary: Biological Process
TermDefinition
GO:0006468protein phosphorylation
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006468 protein phosphorylation
molecular_function GO:0005524 ATP binding
molecular_function GO:0004672 protein kinase activity
Blast
[Close]
BLAST of TCONS_00048334 vs. Swiss-Prot (Human)
Match: KS6B1 (Ribosomal protein S6 kinase beta-1 OS=Homo sapiens GN=RPS6KB1 PE=1 SV=2)

HSP 1 Score: 328.946 bits (842), Expect = 1.020e-107
Identity = 176/236 (74.58%), Postives = 199/236 (84.32%), Query Frame = 1 
Query:  349 EKVPLCQETVN-PKEKLGPSDFDXXXXXXXXXXXXXXXXRKRTGRDADKIFAMKVLKKATIVRNQKDTAHTKAERNILEAIKFPFIVDLLYAFQTGKKLYLILEYLPGGELFMHLEREGVFLEDTASFYLAEITLALEHLHSEGIIYRDLKPENILLDLKGHIKLTDFGLCKESIFHADRTHTFCGTIEYMAPEVLTRSGHGKAVDWWSLGTLMFDMLTGAPPFCSENRKKTQEKV 1053
            EK  + + +VN   EK+ P  F+LL+VLGKGGYGKVF VRK TG +  KIFAMKVLKKA IVRN KDTAHTKAERNILE +K PFIVDL+YAFQTG KLYLILEYL GGELFM LEREG+F+EDTA FYLAEI++AL HLH +GIIYRDLKPENI+L+ +GH+KLTDFGLCKESI     THTFCGTIEYMAPE+L RSGH +AVDWWSLG LM+DMLTGAPPF  ENRKKT +K+
Sbjct:   70 EKFEISETSVNRGPEKIRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKI 305
The following BLAST results are available for this feature:
BLAST of TCONS_00048334 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
KS6B11.020e-10774.58Ribosomal protein S6 kinase beta-1 OS=Homo sapiens... [more]
back to top