TCONS_00048371 (transcript) - C. hemisphaerica

Overview
NameTCONS_00048371
Unique NameTCONS_00048371
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2128

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00048371 ID=TCONS_00048371|Name=TCONS_00048371|organism=Clytia hemisphaerica|type=transcript|length=2128bp
AAAAAATCGAATGGCGTTGTTCTAGTTAATGGTAGtttaaaacaaaatgg
cggagaTGTAGTTTTTGAGATGGGAGATATTAAACAAAGCAATGGAAAAC
CTTCTAATGGACATACGAATCAACAGGATGAATTGGAACTTCGAGAAAAA
CAACCGCCAAGTTACCAATCAGTGCAGCGACCCTCATCCCCGGCCGATGA
AGCACGCCGAGTTCTACGGGGTCCTTTGGCCCCAGTTAATAACTTTTTAA
ACATGCTAGAAGACAACACtcgaaattttattcaaaaggaAAGCCAAACG
GTCAAAATTGTAGCGGCTGTTATTTTCTTGATTCTGTATATCATTTACTT
TTGTTTTGCTGTAACGTTGGATGCTGAGAGAGCGAAAGATTTGATTTATG
TCACCGTTTTTGGattcttttgtttgttttattggttgatCAAGAAGTTC
TTTGGTAGAGTCATTTGGAAATCTTGTTTGAAACCTATTGTAGCTTTCTT
TGAAgccaaaagaaagattttcacaTGgaTACTCTCGCTAGCTTTTGTTG
GTTTTTTAATCTTTTGGCTTTGTTGGGATACGAGAAAAGATCCTGGACGA
TTGATTTCATTGGGTGGTTTGTTGGTTTATATCCTCATCGGATTCTTGTT
CTCAAAACAACGTGATCGGATCCGCTGGCGTCCTGTTATATGGGGATTCG
CACTTCAATTCATATTTGGTTTGTTGATCCTAAGAACTGATATTGGTTTG
AATGTATTCAAATGGCTTGGCGATCGTGTCACTATTTTCTTGGGATTCTC
AAAAGCTGGTATTGAATTCTTGTTCAGAGGTCTCGACCAATTTGGGTTAG
CGattttgCCAATCATTGTCTACTTCTCGGCTGTCACTTACGTTTTATAT
TACCTTGGTTGGATGCAAGTTTTCATCAAGAAGGTTGCTTGGATACTTCA
AGTTACCATGGGAACATCACCAGCCGAATCGGTCAACGCAGCTGGAAATA
TTTTCATTGGTCAAACAGAAGCTCCACTATTGATTCGTCCCTTCTTGGAA
GGGATGACTGCATCAGAACTTCACGCTGTTATGACAGGTGGTTTTGCTAC
CATTGCCGGCTCCGTTCTCGCCACCTACATTCTCTTCGGCGTATCAGCGT
CGCATCTGCTTTCCGCTTCAGTGATGAGTGCGCCCGCTGCGCTGGCAATG
TCCAAATTAATGTACCCAGAAACAGAAGAACCTGAGTTTACAGAAGTCGA
TAAAATTGAAATCGATGGAACTGAAGAGACGAACGTGTTTGAAGCACTTG
CAGTAGGTGCTTCCATGTCTATCGGTCTTGTGGCGAACATTGGTGTTATG
ATTATCGCTTTCTTGTCAGTGTTGGCTTTATTTGATGGTCTTCTTGGATG
GTTTGGTGGTATGGTGGGATTACATGAACTCTCTTTTGAGTTCATCTGTT
CATACGTTTTCATGCCATTCGCTTTTATCATGGGTGTGGATTATAAAGAC
TCCTTTGAAGTTGCAAAGATGTTGGGTATCAAGACCTTCCTCAATGAATT
CATCGCCTATGAGAAGCTTGGTGACATTATCAAGAATAGAGTATTGGAAA
GAGGTGGCTTGACCATGTCTATTCGTTCAGAAGTCATTGCGACATATGCA
TTATGTGGATTTGCGAATTTTGGTTCAATGGGTGTACAGATAGGTGGTAT
TTCATCTCTTGCACCGAGCAAACGAACAGTTTTATCGCAAGTCGTTCTTC
GTGCTTTGGTTGCTGGTACTTTGGCTTGTTTCATGACCGCCTGTGTGGCT
GGAATTTTATATGACGAATCAAGATATGATGTGAGCATTAAGATACCGAC
CAATGGAACAAACACTACCTTGTTTTAAAATGGCTGGTTGCGGTAACCAT
GGTTGCAAAGTTTGTAAATACTCCAATAACCAATTAAATGACGAGCTCTA
TGATAATTTTGTATTCACGTAACCGTTTTCCTACGGGGATAAGAACCATT
TTAAAAGGAATATGGAAAACGATTAACAGGTTTACGAAAGAACCACGTAG
ATTTGGGTTTAGAGGTTTTACatttttgttaagttacgtagttaccgcca
ttatggaaacaaacgttcgaatctgtag
Run BLAST on NCBI

transcript from alignment at scaffold_142:455199..466465-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00048371 ID=TCONS_00048371|Name=TCONS_00048371|organism=Clytia hemisphaerica|type=transcript|length=11267bp|location=Sequence derived from alignment at scaffold_142:455199..466465- (Clytia hemisphaerica)
AAAAAATCGAATGGCGTTGTTCTAGTTAATGGTAGTTTAAAACAAAATGG
CGGAGATGTAGTTTTTGAGATGGGAGATATTAAACAAAGCAATGGAAAAC
CTTCTAATGGACATACGAATCAACAGGTATGGAAAAATAATACAGTTTGA
AATCTGCGGGGTACTAGGGTTGGCGGATGAGGGGTATGTGCGGACGGGAC
CTCCGAAAACCGACCCTTACAGAGACTGATTTTTAGTGAAAAGGTGACCC
TTTTTTGTGAGACTTTTTTGAATAAATCTCTTCGATTTTTGATTATTTGA
GTATTTTTACAGTATTTGGCTTTTGTAATTTGACACTCTTATATTTTCTT
GGAATTTGTCACTTTATTCCGTTGAAAGATTCCTCGGCTAATTCCGAAAC
CACGGTTTCAGAGATCATTTCAGCAAATGAATTTTGCCACAAGCATGTTT
TACAAATTTGGGGTACACTACCCTTACATAACTCTCCAAAGATGACCAAA
ATTTGATCAAGTTTGTATCTTGTCATATTTTACTATCAATCTTTATCAAC
ACGATGTAGATTTCACTCGAACGCACGCTGACAGAAAGGTCGATATTTGA
CACGCTGACTGTGCAGGCTAGTGAAATCTACTAGTTTTCGAAATATTAGA
AGCCTCGTTTTACGTGTTGATGCGTGCTGCTGCTATTCTTTATATTCTGT
AATAAGCATGCAGAAATTCTTTGCCCTCTGCTATCTAACAGGGTTGTGTC
GCTGGATGATGTGAAAAATAGGACTTAAAATCTTTTAACAAAAACTTTCG
CAAAAAAAAGAAGAATGAATAAGTCAAACAGCGCTCTTCATTGCCAATTT
AGCTTTTTTCTCTATAACCAATGCCTAAGACCATCAAACGAAACAATCAT
GCTTGCAAAATACTCAACTTAAGTAGACATATAGTTTAACGCTTTGACTC
GTGTGTCACCTAAATGTCTTTGAGGTATTACAATTTTGAATTTTTCCTGA
GTGCCTTATTTGAAAAACAAACAGATTTTTAAGCACGTCCCGTAATAAGA
TATGCCAATATGTTTTGTATTGTGAATTTAAAACGCGCTTTCAAGGTGTT
TTCAATCGTCTAGCCTAAGCGCGGATCGATAGAATGATTTAGACATTATT
CACAGGCTATTTACGCTATAGATTGATACGAATAAAAAAATGTGCAGTTA
TAAAGTTGATAATATTATTGCTCAGTGGGCCTAAAGTCCAATGCTCTCTA
CATAATTGTGCAAAGGGCTGATCTCATCTTCTGCTGATCTAATTTTCCCT
TGAACCCCCGTATCAAATATTTTGTCTAGTCAAAGAAGCTCTTTGTTTTA
GAATATAGTCTATGAGGGTAAAGGTCCAATTTTTTGTTTGTTGTTATAGC
CAGTGTCGAATATGTCAAATCTGTCTTGTTTTTAGGCCTTCCCTATTGAA
GTATCTGTGTCGCACATCTTTTAACATTTGATTGAACTTTGTGTTATATT
TTTATCAGCTCTTTTGATATCCTCTATTTTGTGGCTCAGAACTGCTGGTT
ATTCCAAATCACTTCAGTCCTTGAAAGTGCAAATACATAAACTCGCTCAT
GTCTCATCTTGTGCATTTTTTAAGAATTTCCAATGCCGTATTTGTTTATT
TTAAATCTCTTGCAGTGCATCTGGGAGGAATTCTGGAAAACCTATCATTT
AAGGGCCTGGATATAGTTCACGCACGAGTCTTTTGTTAGGGGGAGGGGTG
GTTGGTGTGCTAAATTTTCCACCGATTTCCTCATTCCGAATAGTTGAATT
TATAATTAGACGTCCAAACAGAAAGACCCCGATTCAGTAGTCAGTTAGGT
TACAAGAAAAACAGGTAGACCTCAGCAACAGGTCTGTGAGAATCATTTCA
GGTTCTGACAAAAGCTGACCCTTCTTAAATTAATTTCCAGGTCTCCGCCC
ACCTTACAAACTTTGTAAGTTCAAAATACAGACCAGATCGGTTTTTAAGT
CATCATCTTCCCTTCCATTAAGAACTGTTTTTTCGAAAGAAACAAAACAT
ACCTTAGTGTTATTTGATATTCCGATGGCGGATTGGCGGCCGCCCACGCT
AAAGCTGTAAAGGAGCGTGCCAATTTCCCATATGAGAGGAATGATAGTCG
GCCTGTGCTCCACCCCCAGTCGGGTTCAACAACCCTTGTGCGTAAACCTA
TAAATATTTTGGTTGGACCTGCCAATCCCCGAAAACGAGGGCTGGGTTAC
CAGACCTCCCGCTGCAAAATTCTTGACGCGGTCTCGCATAATCCCATAAT
GTAAACCTTCCAGATGTTGAAAATTTTCCCGACCTTCAGAGCTTTAGCGT
GTCGGATGAAAATTTCACCATCTGGGTGCCAGATAATAAACCTTAGTGTA
GATTCTGATTTTTAGACGTATGTTACGTAACAGTGCTTGAGTTTAGGGTG
GTAAATTGAATAATAAAGTGGCACGCGGTTGACCGCGCGACTAAGGTCGT
AAAAGGTGTATTGTCAGTCCATGTGAAATAAAAAGCTCGTAAAATGCTTT
CTATAATTCGAACCTTTCTGTAATTCGAACAAATTAGACTTTAATAAACT
AATTAGACCTCCCGCTCGACGTCAAATCGGCGACCATCAACAGTATTGAG
GATGGATATTTAATGAGCTCTTGAGAGCGGTAATTGGCTAAAGCAAAACA
ATCGCACCAAAACAAATGTCAATCAACATTAAAAATAAAACCCAGTCGCT
CTAACTTTCGTTTCCAAGCAAAAAGCAATGTGGTTTTGGCTGAGCAACCA
TTTCAGATTATCACATTCGCCACATTTCTTTCAAAGCAGAGCAACGCATG
CGCAGAATGAATTATCTGTAATAGGATTACCCATGTGACAATCGATATTT
CTGCTTGTCTATTTTATCCTGATTAAAATTACATTTTTGAAAAGGTTTTT
AGGTCTTAAGCGCTTGACATATGTTTTAAACGGCTGTCATATCTTTTATG
ATGTGTTGAACAATATGTAAACAAGTAATGAATTTTGTTTATTTTTGCCC
TTTTTAAGGACGGTTTTTTAAATCGATCTGAAAGCCGTACCAATTGTTCC
ATAATAAAGACTTAATAATAGTAAGAGATTTCGTAAATTCCAATTATATA
GCTGAAGCCGTAAAAAATTAATTAAAAATACCTTACATAAAGTTTTACTA
AAAATTAAATCTATAGTGTGCCATACATAGCCTTTTATCTGCAATTCACA
TCTAAATCGTGATTCTATCATGTTTTAAAATCCAGGGGTCTCCTAAAACC
ATATAAAGATCATTAAAGAAAGAGGAGGGTGTATATTGGGTAGAAAGCTC
AAATACTCCCTCTCATTCAAGTCATATTCGCGTATACTTTTCTCGAGTAA
ACGCGAAAGGAAATTGATGAATTTTATGTTGTTTTGATTAATTTTGTACA
AAGATCTTATTCGCATAGTATACTCTCTTGTCCTACGAAAGGGGACTTTC
TCAATCTTAGAAAAATATTTAAGTGGAACACTTGGAATGTTGTTTTTCTA
CTGCTAATGTGATTAAACTTGATAAGTAATGGATAATGATGGAAAGGCAC
AGGTATGAATAAATATCTCCTTGTTTACCTTTTTGGCCCCTTTGTTTTGT
TAAAGTCGCCCCTTAATCATTGCCCAATTTCGAGCTTACACCAATGAAGA
CCATAAATAACACCAAAATCTTCAACATCTCTAAACAGGCTTTAAAATAC
TGAATATTGGCTTGAATTCTCCTTAAAATGTTAAAACTTTATAAAACTTC
TGTTTGTAAACTTTTGAAAATTGTATTGAGAATTATAATGCTTTGCGAGA
AATTTTGGACGTAAATGCTTAAAAGAATGGAATCTCCTAATAACCACATT
CAACTCTCGTGAAAAGAATAAAAAAAGTCGCCGTTTTTANCCCCCCCCCC
CCGGGGATTTACCCTCAATACACCCTCTCTATGTCTTAAGTTTCCTTCTC
TTGGATTATTTAACTGTTTGTATAACTGCACTTACTACAAGGTCGTGTTA
CAAAGTAACCTTTCATTTGCGTCACTTGTGTGATTTTTCTTTATCGTCAA
GACTGGACAGTCGCTTATAATCCATGTAATAGAGAATACACTTGACTCTA
ATTCGATGTTTAATAAAGGAACTCAACAGATTTCGAATTAAAAGAGATAC
GCTATTCAAGCAATAAGGAACTCAAAATCAATTTAGGTTCCTTACGAAGG
GTAATTTTTTTCAGCTTGGGGGACCTATATTTTAGTTCAAATTGCAGAAC
GATTAGATGTTTTAAAAACCTTCGGATGGATCAACTTATATGAGAATGAT
TCGAATAATAGAGGTTCGAATTAGAGAGAATTGACTGTATAGGGTCTCGT
ATGAAAATAAAATGTGATAAATGTTCCAGAATGATTTCAGTATGACAATT
TGCCGCGTCCATTATTTTTGCTTGTTTTCTATCATGTTTGAAGTGATTAG
TAACAGTACAATCCTGACAAAAGTTGTTTTCCTTAATTCTCACCTTAATT
TTCCATATTTCGATAAATTTTGATTTCTTTTCAGGTAGTATTCCACTCAT
AAGCATTTTTTCAACGAGCAACACATCGCAATATAAATCGAATTTGATCA
AAATTTTCAGCCTTTTATTTTCTACTTTATATTATTTTGATCTGCATGAT
CTCATCAATAGTGGTGTATCTAAGGGGAGGGCTCAAAATTAATGGCGGAG
CCATACTTCTTTAAGGATGAAGGCTCAAATCAATCACTGGGCACTCTGTA
TCAGAGTGTATCTCATGTTTATCGCTTCGTAGTACACTCTGTGCGCTTTT
TATTCCCGTACGGAAACCTCTGCGATGAAGTATTATTTATAAATACCAAA
CACTTCTCTCGTCGTCTCCCCTCTCTCGCCTGCATTCCATCACAGGGGTC
AGTTTGAAAAATCTCAAATCCGAAAAGACAATGACAACAGACCCTCTACG
GCAGTGAATTTTGAAATAAGCCGTAGATACCGGGTCTGTGTACAGACTAG
TCACTATGAGGCAATTCCCAATAACGCAAGCTCTATGATAAACATACTTT
TGTACATATCCATAAAGAAATTTTTCCATCGCAAGGCTCAATTCGTTTAC
ATTTCTTTGTTTCCTTGATTTAATATAACCTAATGAAGATATTAAAGTAA
ACCAACATATTTTACGATCATTTTTCTTTATAATTTAGGATGAATTGGAA
CTTCGAGAAAAACAACCGCCAAGTTACCAATCAGTGCAGCGACCCTCATC
CCCGGCCGATGAAGCACGCCGAGTTCTACGGGGTCCTTTGGCCCCAGTTA
ATAACTTTTTAAACATGCTAGAAGACAACACTCGAAATTTTATTCAAAAG
GAAAGCCAAACGGTCAAAATTGTAGCGGCTGTTATTTTCTTGATTCTGTA
TATCATTTACTTTTGTTTTGCTGTAACGTTGGATGCTGAGAGAGCGAAAG
ATTTGATTTATGTCACCGTTTTTGGATTCTTTTGTTTGTTTTATTGGTTG
ATCAAGAAGTTCTTTGGTAGAGTCATTTGGAAATCTTGTTTGAAACCTAT
TGTAGCTTTCTTTGAAGCCAAAAGAAAGATTTTCACATGGTAAGAACTTT
TACCTTGCGTAAAGAGTAAACAAAGCTGATAAATTGGTAGCGAAAAAGCT
AATATTTAATCCGTCAGCGGTCGAAACCTCCCTTTAGCGGTCGAATCCCA
CCTTTAGCGGTCGAATCCCACCTTTAGCGGTCGAATCCCACCTTTAGCGT
TCGAAGCCCGCCTTTAGCGGTCGAATCCCATCTTTAGCGGTCGAATCCTG
CCTTTAGTGGTCGAATCCCACCTTAAGTGGCCGTGGCCAGCTTTAGCAGC
CGAAACACATCTATGGCGGCAGAAACCTTTATAAAGGGTAGAGTTCAGTG
GAGACGCGGGCAAAAGAGAACAGGACATTTCAGGCCCGGCAAAACAATCA
TAAAGTTGGGGAGGCTGAAAGCTCAAAATGAGATACAATTTGCTAGGAAT
TTGAGAAAAAAATCTCACTTGTCTCCCCGCTTCCATGGGCCTGCATTTTG
GGCCTAAAATTTAGTCTTTGTTTTTCTTTAGGATACTCTCGCTAGCTTTT
GTTGGTTTTTTAATCTTTTGGCTTTGTTGGGATACGAGAAAAGATCCTGG
ACGATTGATTTCATTGGGTGGTTTGTTGGTTTATATCCTCATCGGATTCT
TGTTCTCAAAACAACGTGATCGGGTTAGTAAAGATATCAAATTTCGAACT
TGGGGGTTAACCAGAGTAATAAATATATTCTTAGGTTTATAGTGGAGCCT
CCTTAACTCCAACCTCTACGCAAATTCTTTTGAGATTTAAAATGGTTTGG
CATTTTGAGATAAGAAACCCTCTTTAACCTCAAAAAGAAACTTCAGTGCT
TATTAGAGTTGTAGTATTTATTCTATAATACAGCTGTTACCAAAATAAAA
TCAGGTACAGAAATACGTTTTCGCATCGGTAAGGTCTTCGTGTATATTGT
TTCCGGAGCCAGAAAACAGGGCAGCTTCGTGTTGAAAAAGTGTTTCGGAC
TTTTTTGATTCGAAATGATGTCGAACCGTAATGTCTGAACATGGTCTAAT
ATTTCAAAGATTATCTTCCGTAAACCGTATAATTTAACTGTATTATCATT
TAGATCCGCTGGCGTCCTGTTATATGGGGATTCGCACTTCAATTCATATT
TGGTTTGTTGATCCTAAGAACTGATATTGGTTTGAATGTATTCAAATGGC
TTGGCGATCGTGTCACTATTTTCTTGGGATTCTCAAAAGCTGGTATTGAA
TTCTTGTTCAGAGGTCTCGACCAATTTGGGTTAGCGGTAAGTTAAGTTAA
CTTTAACCCCATTGACTTCCAAGCCCGAAGGACTAGACATGAGTCTCCTG
GATTAGAAATGAAGCCACATATTTCCCCTTCTAAACGCGTGACCCACGTG
TTTTCCACACAAACGCTAGATTGAAAGTAAAATATAACGCCAGATTTCGA
AAAATATGCCGCGTGAAAACAAAGAAAAGGCTAGATTTAATCCGTCATTC
TAATAGCGGCGCAAACCTTAAGGCTTCACTTTTTCTTGCTTGAGAAAGGT
TGAACATTCATCTCTAAAAGCCCCTGGCTTTAAACTCAATATATACACCC
CTGTCTCACAACCCCCGCTTTTCCCATAGTGGAGATGAAGATTCAATTGT
TCCTTTCCATATGAAATTTTTTACTTTATTTAATTTTTGTTTTAGATTTT
GCCAATCATTGTCTACTTCTCGGCTGTCACTTACGTTTTATATTACCTTG
GTTGGATGCAAGTTTTCATCAAGAAGGTTGCTTGGATACTTCAAGTTACC
ATGGGAACATCACCAGCCGAATCGGTCAACGCAGCTGGAAATATTTTCAT
TGGTCAAGTAAGTCACCATGGTGTTCTAGAATTCATGCTATTCATGATGT
AATATTTTCTACGGAAATACCTTGGCTTTTGCCAGTAAAATATCTTATCA
AAATCTTATCTTTCCTATTTCATTTCTAATTTTAAATTGACCACTACTGG
CAAAAAACAGGGGGTTTCCTTAGAAAATACTTTGTTAAACCCCCAGGTTT
TCTTGTTAGGTAACTCTTGATATCATTTTTTCACATGTCAGCCTTTTATT
CTATCCTGGTAGGTAAAAAAATTTGGACTAGGTGTGTCAATTTTATTTTT
AAGTCAATAATACATTGAAAAATTTGAAGTTGTGCAACCGTTATACTTCA
TTTGCGTTCGTTATGATATATTACAAACGAAAACCTTAATTTTTACGTGC
GAACTTCTGTAAGATCATAACATTAAATTCGTTTCGTTCCTTTAGACAGA
AGCTCCACTATTGATTCGTCCCTTCTTGGAAGGGATGACTGCATCAGAAC
TTCACGCTGTTATGACAGGTGGTTTTGCTACCATTGCCGGCTCCGTTCTC
GCCACCTACATTCTCTTCGGCGTATCAGCGTCGCATCTGCTTTCCGCTTC
AGTGATGAGTGCGCCCGCTGCGCTGGCAATGTCCAAATTAATGTACCCAG
AAACAGAAGAACCTGAGTTTACAGAAGTCGATAAAATTGAAATCGATGGA
ACGTAAGCAATATACTAATTGAAACTTGAACGAAAAATCCCATCTTATTT
GAATTACAGTGTAGTCTCTCTAACTCGAACCTCTATAACTCGAATTTAGT
GTTTTATCGTCCCTTCAGTTAACAATACCTTAAAACCTTACTCAATAACT
CTATAACTCTAATAAGAAATTTCCTTTACTCAACAAATTTTTCGTTCCCC
GTCCGAAGTTGTTTTACCTCGGAAAATTTTTTTTGCCAATTATCAAATTG
CATTGACTTTTTTTTTCTACGAAATTTAGTGAAGAGACGAACGTGTTTGA
AGCACTTGCAGTAGGTGCTTCCATGTCTATCGGTCTTGTGGCGAACATTG
GTGTTATGATTATCGCTTTCTTGTCAGTGTTGGCTTTATTTGATGGTCTT
CTTGGATGGTTTGGTGGTATGGTGGGATTACATGAACTCTCTTTTGAGGT
GAGTACAATAAACTACATACACCTTAAAAACGCCACAAAGGGATTGTGTT
CAAAACACAAATTCCCTAGTATAGCAGATTCATGTAAAAAAGTCACGAAA
CGTCGAAACTCTGATTAGCAGAGACATGCAAAGATTACTTATTCATACTC
TGAACATTTTGAAAAACATTTGCTTATGTGAGCAATTTTCAGCCAATCAG
AGCATTAGTCGATGTTTTTTCGCGACTTTTTACATGAATCTTTTAATTGG
AAATTCGTTTATTCACCAGGGAGGATCGACGTCACAGGGTGCCTCTATCT
GAAGAACGTTTGAACTCAATCCTAAATGGTAAACGATAACCCATGCTTTA
AAAGTTGATGGAAGATTTTCATGTTTTGTTAAGTTACGTAAACTCCGCCA
TTATGGGAGCAAACTTTCGATTTGCGTGAGGAATTGCCTCTACATATTCG
AACGTTTGCTTCCATAAGTAATGGCGGATAAATTACGTAATTTTAAAAAA
CATAGAAAACCTCATTAAAGTTGTAATCCGATGAAACTCAAAATACTTTT
TGTTTTCTGTTTCAGTTCATCTGTTCATACGTTTTCATGCCATTCGCTTT
TATCATGGGTGTGGATTATAAAGACTCCTTTGAAGTTGCAAAGATGTTGG
GTATCAAGACCTTCCTCAATGAATTCATCGCCTATGAGAAGCTTGGTGAC
ATTATCAAGAATAGAGTATTGGAAAGAGGTGGCTTGACCATGTCTGTGAG
TATTTATTATTGTGAGTTCTACTCAATTACTTACCTTACCAGGTCGAGCT
TGCTCGGCTTGCGATGACACGTTCTCTTCATACTGTTTCCGATATCTTAC
GACATTTGGAAGGTCTTCCTTTGAGCAGCCTTCATCATCTCTTAGTTGGC
CATTGTATATTTTGTAATCGGTCTGCCTCGTGGTCTTTTCCCATGGAGGG
ACTCCCAAAATATTACCTCCCAAAATATTACCTCCCAGTTAGGCTTTCCA
TACCGTGGCATAAAGTTAGAGCATTCCGCTTCGGTGCGCAAGGTTGTGGG
TTCAGCCTTAGATTTGCTAAAAGTTATGCAAAAACAAAACAAAAAAGTAA
ATTAGACAAACTTTAGTACTTTATAACTTTCTGCCTGATGTAAACAATTA
AATAGAAAGGTCACGAGAGTAAGCGGGGAATTCCAGGGAATGAAGTGGGG
TCCTACCTGCGTAAAGACAGTTTAGAAAAAGGGAGCCTTTACAAAAAAAA
TAATAATTAGGTGTCAGCTCACCTATGCGTGTATATGCGATGCCCATTGA
CAAACACTTTTGCTTTTACATTTTGTAGATTCGTTCAGAAGTCATTGCGA
CATATGCATTATGTGGATTTGCGAATTTTGGTTCAATGGGTGTACAGATA
GGTGGTATTTCATCTCTTGCACCGAGCAAACGAACAGTTTTATCGCAAGT
CGTTCTTCGTGCTTTGGTTGCTGGTACTTTGGCTTGTTTCATGACCGCCT
GTGTGGCTGGTAGGTTTCAGCTGTATTTCTATCATTTTTGAAGTCCTTTT
TTCTAGAGGAACCTTTGGTTTAAATTTTTCTGGGTTCAAATCTCTTGAAA
AAACAGTAAGTGTTTCTCTCTGAAACTTTTCCACCTCAAGTGTTTTCAAA
GCTAAATACTATTAAATTAGATTAGAATCAAGCACCTTTCGGGTAACTAA
CATAGACTAGTAAACTAGTCGGTTATTTATTACTTATAACCTTATAATAA
AACTGTCAATCAAATAATGTAAAAACTAATTAAATATTCAACGCGCGTGA
GAGAAAAGGAAAATAACCGACTAGAAGCTACTTCCAACGCCTTTTTTTCT
TCACCTAAAATCGTAAGGAGAGACATACAGATTTCTGTATGTCTGACCCG
TGCGGGATTGCATTTATTTTTCTTTCTGTTTATTGCGTTTTTAGAAAGGC
TCATTTATTTATATGTTCCCATGTTCAATGTTACTATGAAATATCATTTA
GTCAAAAAAGTTGGATGGATTCTCAAAAAACCTAAAAAAAGTTGTAAAAT
TAAACAACGTTTTTTGAGGGAAGTAGCTTCTAGTCGGTGAAATTCAGAAA
AGAGACGCAACTTCACCCCTTCGATTCTTTTTATTTGCAGCTTGATTTTT
TGTATATGGGTCTGTTTTCAACGACTAGTTTACTAGTCTATAACTAACAT
TGATGTAAGATTCCAATCCTTCTGTAGTTCGAACTTAAACACCCTGTTAT
TCAAATGTTTGTCTAATTTAATTGTTTTATAGTTTCTGTCCCTTTAAAAA
CAGATTAAAGGGAGTCTTCAAATTCCGTTATTAATTTCAGGAATTTTATA
TGACGAATCAAGATATGATGTGAGCATTAAGATACCGACCAATGGAACAA
ACACTACCTTGTTTTAAAATGGCTGGTTGCGGTAACCATGGTTGCAAAGT
TTGTAAATACTCCAATAACCAATTAAATGACGAGCTCTATGATAATTTTG
TATTCACGTAACCGTTTTCCTACGGGGATAAGAACCATTTTAAAAGGAAT
ATGGAAAACGATTAACAGGTTTACGAAAGAACCACGTAGATTTGGGTTTA
GAGGTTTTACATTTTTGTTAAGTTACGTAGTTACCGCCATTATGGAAACA
AACGTTCGAATCTGTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_030775XLOC_030775Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00048371-exon-scaffold_142-1575043694:466340..466465TCONS_00048371-exon-scaffold_142-1575043694:466340..466465Clytia hemisphaericaexon
TCONS_00048371-exon-scaffold_142-1575043694:460827..461227TCONS_00048371-exon-scaffold_142-1575043694:460827..461227Clytia hemisphaericaexon
TCONS_00048371-exon-scaffold_142-1575043694:460193..460334TCONS_00048371-exon-scaffold_142-1575043694:460193..460334Clytia hemisphaericaexon
TCONS_00048371-exon-scaffold_142-1575043694:459580..459762TCONS_00048371-exon-scaffold_142-1575043694:459580..459762Clytia hemisphaericaexon
TCONS_00048371-exon-scaffold_142-1575043694:459009..459170TCONS_00048371-exon-scaffold_142-1575043694:459009..459170Clytia hemisphaericaexon
TCONS_00048371-exon-scaffold_142-1575043694:458314..458570TCONS_00048371-exon-scaffold_142-1575043694:458314..458570Clytia hemisphaericaexon
TCONS_00048371-exon-scaffold_142-1575043694:457868..458036TCONS_00048371-exon-scaffold_142-1575043694:457868..458036Clytia hemisphaericaexon
TCONS_00048371-exon-scaffold_142-1575043694:457121..457300TCONS_00048371-exon-scaffold_142-1575043694:457121..457300Clytia hemisphaericaexon
TCONS_00048371-exon-scaffold_142-1575043694:456357..456537TCONS_00048371-exon-scaffold_142-1575043694:456357..456537Clytia hemisphaericaexon
TCONS_00048371-exon-scaffold_142-1575043694:455199..455525TCONS_00048371-exon-scaffold_142-1575043694:455199..455525Clytia hemisphaericaexon
TCONS_00048371-exon-scaffold_142-1510915933:466340..466465TCONS_00048371-exon-scaffold_142-1510915933:466340..466465Clytia hemisphaericaexon
TCONS_00048371-exon-scaffold_142-1510915933:460827..461227TCONS_00048371-exon-scaffold_142-1510915933:460827..461227Clytia hemisphaericaexon
TCONS_00048371-exon-scaffold_142-1510915933:460193..460334TCONS_00048371-exon-scaffold_142-1510915933:460193..460334Clytia hemisphaericaexon
TCONS_00048371-exon-scaffold_142-1510915933:459580..459762TCONS_00048371-exon-scaffold_142-1510915933:459580..459762Clytia hemisphaericaexon
TCONS_00048371-exon-scaffold_142-1510915933:459009..459170TCONS_00048371-exon-scaffold_142-1510915933:459009..459170Clytia hemisphaericaexon
TCONS_00048371-exon-scaffold_142-1510915933:458314..458570TCONS_00048371-exon-scaffold_142-1510915933:458314..458570Clytia hemisphaericaexon
TCONS_00048371-exon-scaffold_142-1510915933:457868..458036TCONS_00048371-exon-scaffold_142-1510915933:457868..458036Clytia hemisphaericaexon
TCONS_00048371-exon-scaffold_142-1510915933:457121..457300TCONS_00048371-exon-scaffold_142-1510915933:457121..457300Clytia hemisphaericaexon
TCONS_00048371-exon-scaffold_142-1510915933:456357..456537TCONS_00048371-exon-scaffold_142-1510915933:456357..456537Clytia hemisphaericaexon
TCONS_00048371-exon-scaffold_142-1510915933:455199..455525TCONS_00048371-exon-scaffold_142-1510915933:455199..455525Clytia hemisphaericaexon
TCONS_00048371-exon-scaffold_142-1491911889:466340..466465TCONS_00048371-exon-scaffold_142-1491911889:466340..466465Clytia hemisphaericaexon
TCONS_00048371-exon-scaffold_142-1491911889:460827..461227TCONS_00048371-exon-scaffold_142-1491911889:460827..461227Clytia hemisphaericaexon
TCONS_00048371-exon-scaffold_142-1491911889:460193..460334TCONS_00048371-exon-scaffold_142-1491911889:460193..460334Clytia hemisphaericaexon
TCONS_00048371-exon-scaffold_142-1491911889:459580..459762TCONS_00048371-exon-scaffold_142-1491911889:459580..459762Clytia hemisphaericaexon
TCONS_00048371-exon-scaffold_142-1491911889:459009..459170TCONS_00048371-exon-scaffold_142-1491911889:459009..459170Clytia hemisphaericaexon
TCONS_00048371-exon-scaffold_142-1491911889:458314..458570TCONS_00048371-exon-scaffold_142-1491911889:458314..458570Clytia hemisphaericaexon
TCONS_00048371-exon-scaffold_142-1491911889:457868..458036TCONS_00048371-exon-scaffold_142-1491911889:457868..458036Clytia hemisphaericaexon
TCONS_00048371-exon-scaffold_142-1491911889:457121..457300TCONS_00048371-exon-scaffold_142-1491911889:457121..457300Clytia hemisphaericaexon
TCONS_00048371-exon-scaffold_142-1491911889:456357..456537TCONS_00048371-exon-scaffold_142-1491911889:456357..456537Clytia hemisphaericaexon
TCONS_00048371-exon-scaffold_142-1491911889:455199..455525TCONS_00048371-exon-scaffold_142-1491911889:455199..455525Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_142supercontigscaffold_142:455199..466465 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.73843	1.46796e-07	4.40272e-10	7.04335e-05	0.258398	1.07647	0.00455288	0.00244486	0	8.0723e-08	0	4.64711e-07	9.56502	11.4252	8.18843	7.31497	19.868	12.6397	3.43526	2.55837	38.0193	34.4649	2.08277	9.28115	14.7131	12.1414	0.6526	2.5499	10.9736	11.0808
Blast
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BLAST of TCONS_00048371 vs. Swiss-Prot (Human)
Match: S28A3 (Solute carrier family 28 member 3 OS=Homo sapiens GN=SLC28A3 PE=1 SV=1)

HSP 1 Score: 464.922 bits (1195), Expect = 2.933e-153
Identity = 277/590 (46.95%), Postives = 378/590 (64.07%), Query Frame = 1 
Query:   85 QSNGKPSNGHTN-QQDELELR-EKQPPSYQSVQRPSSPADEARRVLRGPLAPVNNFLNMLEDNTRNFIQKESQTVKXXXXXXXXXXXXXXXCFAVTLDAERAKDLIYVTVFG-FFCLFYWLIKKFFGRVIWKSCLKPIVAFFEAKRKIFTWILSLAFVGFLIFWLCWDTRK-DPGRLISLGGLLVYILIGFLFSKQRDRIRWRPVIWGFALQFIFGLLILRTDIGLNVFKWLGDRVTIFLGFSKAGIEFLF--RGLDQF-GLAILPIIVYFSAVTYVLYYLGWMQVFIKKVAWILQVTMGTSPAESVNAAGNIFIGQTEAPLLIRPFLEGMTASELHAVMTGGFATIAGSVLATYILFGVSASHLLSASVMSAPAALAMSKLMYPETEEPEFTEVDKIEIDGTEETNVFEALAVGASMSIGLVANIGVMIIAFLSVLALFDGLLGWFGGMVGLHELSFEFICSYVFMPFAFIMGVDYKDSFEVAKMLGIKTFLNEFIAYEKLGDIIKNRVLERGGLT--------MSIRSEVIATYALCGFANFGSMGVQIGGISSLAPSKRTVLSQVVLRALVAGTLACFMTACVAGIL 1809
            +S    S  HTN +QDE ++  E+  P      R     D+     +G        L    D    F +K   T++ +   I L  Y++    A  L+  RA  L  +TV   FF ++  L+ K+  R+     L P      +      W++  + V  +IFWL +DT K    +L+S GGL++YI++ FLFSK   R+ WRPV+WG  LQF+ GLLILRTD G   F WLG +V  FL ++ AG  F+F  +  D F    +LPI+V+FS V  +LYYLG MQ  I+KV WI+ VT G+SP ESV A+GNIF+GQTE+PLL+RP+L  +T SELHA+MT GF+TIAGSVL  YI FGV +SHLL+ASVMSAPA+LA +KL +PETE+P+ T  + ++++  +  N+ EA   GAS SI LVANI V +IAFL++L+  +  L WFG M    +LSFE ICSY+FMPF+F+MGV+++DSF VA+++G KTF NEF+AYE L   I  R  + GG          +SIRSE+IATYALCGFAN GS+G+ IGG++S+APS++  ++   +RAL+AGT+ACFMTAC+AGIL
Sbjct:   38 RSRAVQSREHTNTKQDEEQVTVEQDSPR----NREHMEDDDEEMQQKG-------CLERRYDTVCGFCRKHKTTLRHIIWGILLAGYLVMVISACVLNFHRALPLFVITVAAIFFVVWDHLMAKYEHRI--DEMLSPGRRLLNSHWFWLKWVIWSSLVLAVIFWLAFDTAKLGQQQLVSFGGLIMYIVLLFLFSKYPTRVYWRPVLWGIGLQFLLGLLILRTDPGFIAFDWLGRQVQTFLEYTDAGASFVFGEKYKDHFFAFKVLPIVVFFSTVMSMLYYLGLMQWIIRKVGWIMLVTTGSSPIESVVASGNIFVGQTESPLLVRPYLPYITKSELHAIMTAGFSTIAGSVLGAYISFGVPSSHLLTASVMSAPASLAAAKLFWPETEKPKITLKNAMKMESGDSGNLLEAATQGASSSISLVANIAVNLIAFLALLSFMNSALSWFGNMFDYPQLSFELICSYIFMPFSFMMGVEWQDSFMVARLIGYKTFFNEFVAYEHLSKWIHLR--KEGGPKFVNGVQQYISIRSEIIATYALCGFANIGSLGIVIGGLTSMAPSRKRDIASGAVRALIAGTVACFMTACIAGIL 612
The following BLAST results are available for this feature:
BLAST of TCONS_00048371 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
S28A32.933e-15346.95Solute carrier family 28 member 3 OS=Homo sapiens ... [more]
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