TCONS_00048469 (transcript) - C. hemisphaerica

Overview
NameTCONS_00048469
Unique NameTCONS_00048469
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length92

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00048469 ID=TCONS_00048469|Name=TCONS_00048469|organism=Clytia hemisphaerica|type=transcript|length=92bp
GCAGATTTACAGCTAGGataaaaatcatcattttcaatgCCATTGTTGGT
GAAGAATATCTTATATGCTATGTCTGACGTTTATCAACCAAA
Run BLAST on NCBI

transcript from alignment at scaffold_142:436266..436357

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00048469 ID=TCONS_00048469|Name=TCONS_00048469|organism=Clytia hemisphaerica|type=transcript|length=92bp|location=Sequence derived from alignment at scaffold_142:436266..436357 (Clytia hemisphaerica)
TTTGGTTGATAAACGTCAGACATAGCATATAAGATATTCTTCACCAACAA
TGGcattgaaaatgatgatttttatCCTAGCTGTAAATCTGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_030823XLOC_030823Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00048469-exon-scaffold_142-1491911889:436266..436357TCONS_00048469-exon-scaffold_142-1491911889:436266..436357Clytia hemisphaericaexon
TCONS_00048469-exon-scaffold_142-1510915933:436266..436357TCONS_00048469-exon-scaffold_142-1510915933:436266..436357Clytia hemisphaericaexon
TCONS_00048469-exon-scaffold_142-1575043694:436266..436357TCONS_00048469-exon-scaffold_142-1575043694:436266..436357Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_142supercontigscaffold_142:436266..436357 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00048469 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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