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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00048543 ID=TCONS_00048543|Name=TCONS_00048543|organism=Clytia hemisphaerica|type=transcript|length=940bp
TTACGTACAATTTtgttaaacaaaaatatttctacatTTGTAAATTTTCG
GTTACTAATCGTACATTCACGTTTGTTCGAACCACTTCTTCACAGATTTC
GTTGTCTTTGTTTCTTATCGAACGGGCTGTAGAAATTTGATCGTCTCGGT
TTACacatataagaaaaaattaggaaagaaGAGTTGAAAAGGTTAACTTA
ACTAATCTCAGTTAGCGCTCTTCTGCAAATGCGAGGATTATCAGAATCGA
AAGGTAccattttaaatatattttcaacgcATGCGCNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGAGAAACACG
CTTCTCCACTATTTCTCGTCTTAGCTTGGAGTGGTAAAGATATAAAGAAC
AAATCTTAATTTAATTTTGGAATCATATTGCATTGAACACGAGGAGAAAA
AAGACAAGAAACGCAAATGTTGTAACTACGTAACGTTAAGTGCCAAGGTT
ACTACATACTAGGAAATTGGAATCTTTTAGCATGACGAATAAGAATAAGA
TCTGAGGTTAAAGGTTCCTTGCTGTTCTTCTTTGAATTTAAGTTTCTGCT
AGCATTGACATGTCTATCACCTTCAAGCGCAAGCTTCACTAGAGGGTTGT
CTGTAGGAGAATAAAAACCTGAGGAATGATGGCCCCAACGAATGCAACGG
TCAAGGCTCCTTCTGCAGCACCAGAACAAGTAAGGTCATAAGGTCAACAA
TATAGAAAAAATGTAAATGTAACTTTCATACCTTGTAAGGTGGTATGTGC
AACGAGGCATTGATACCACGATCAACAACAAGTGATATATGCAACGACGG
CAGGGATATCTTTCAAAATAATAGGCGCAACGAGGCAACCATATCTCTAA
ATAGATGTGTGCAACGAGGCATTGACATCTCCAAGTTGAT Run BLAST on NCBI transcript from alignment at scaffold_143:185242..186181- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00048543 ID=TCONS_00048543|Name=TCONS_00048543|organism=Clytia hemisphaerica|type=transcript|length=940bp|location=Sequence derived from alignment at scaffold_143:185242..186181- (Clytia hemisphaerica)
TTACGTACAATTTTGTTAAACAAAAATATTTCTACATTTGTAAATTTTCG
GTTACTAATCGTACATTCACGTTTGTTCGAACCACTTCTTCACAGATTTC
GTTGTCTTTGTTTCTTATCGAACGGGCTGTAGAAATTTGATCGTCTCGGT
TTACACATATAAGAAAAAATTAGGAAAGAAGAGTTGAAAAGGTTAACTTA
ACTAATCTCAGTTAGCGCTCTTCTGCAAATGCGAGGATTATCAGAATCGA
AAGGTACCATTTTAAATATATTTTCAACGCATGCGCNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGAGAAACACG
CTTCTCCACTATTTCTCGTCTTAGCTTGGAGTGGTAAAGATATAAAGAAC
AAATCTTAATTTAATTTTGGAATCATATTGCATTGAACACGAGGAGAAAA
AAGACAAGAAACGCAAATGTTGTAACTACGTAACGTTAAGTGCCAAGGTT
ACTACATACTAGGAAATTGGAATCTTTTAGCATGACGAATAAGAATAAGA
TCTGAGGTTAAAGGTTCCTTGCTGTTCTTCTTTGAATTTAAGTTTCTGCT
AGCATTGACATGTCTATCACCTTCAAGCGCAAGCTTCACTAGAGGGTTGT
CTGTAGGAGAATAAAAACCTGAGGAATGATGGCCCCAACGAATGCAACGG
TCAAGGCTCCTTCTGCAGCACCAGAACAAGTAAGGTCATAAGGTCAACAA
TATAGAAAAAATGTAAATGTAACTTTCATACCTTGTAAGGTGGTATGTGC
AACGAGGCATTGATACCACGATCAACAACAAGTGATATATGCAACGACGG
CAGGGATATCTTTCAAAATAATAGGCGCAACGAGGCAACCATATCTCTAA
ATAGATGTGTGCAACGAGGCATTGACATCTCCAAGTTGAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00048543-exon-scaffold_143-1575043694:185242..186181 | TCONS_00048543-exon-scaffold_143-1575043694:185242..186181 | Clytia hemisphaerica | exon |
| TCONS_00048543-exon-scaffold_143-1510915933:185242..186181 | TCONS_00048543-exon-scaffold_143-1510915933:185242..186181 | Clytia hemisphaerica | exon |
| TCONS_00048543-exon-scaffold_143-1491911889:185242..186181 | TCONS_00048543-exon-scaffold_143-1491911889:185242..186181 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_143 | supercontig | scaffold_143:185242..186181 - |
Blast
The following BLAST results are available for this feature:
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