TCONS_00048673 (transcript) - C. hemisphaerica

Overview
NameTCONS_00048673
Unique NameTCONS_00048673
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2358

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00048673 ID=TCONS_00048673|Name=TCONS_00048673|organism=Clytia hemisphaerica|type=transcript|length=2358bp
AAGTTCCATCCAATAAGAGAGAACTGTAAATATTGTaaTGGATGCAGAGG
ATGGACCAAGCGAAGGAAAGTTTGTGGTCAAATATGTAGAACcatatgat
gacgtcatctattTTGTTAAAACTGTCACCGTCAAAGAGATGAGTGGGCC
TGAAGACGGATTTCCTTATAACTCCATAATCCGCGAGACCGATTTGAGAG
AGCTCAAAGAGACTGACCTACTAGACTACGAAGACGATTTCCAAGAAGCG
AATTTGACTTTATATGATTTCATCGAcgaagaaagtatgaatcaattaaa
taaaaacaaagatatgCCCTATCTACCGAGGGAGAAAGAAGCGAAGGCAG
ACAAGCTATCAGACAATCGTAACATGGAAAGCTCTACACTGGATATCAAA
GAGTTAAGGTCAACCGATATTTCGAAAATTGCAGCGATAAAGGAAACGGA
TTTATGTAGTAATGATGATGATTCGAGTACAGACGTCGAGCAACGTTCCC
AAGAGGAAAGCGTGTCTCTGTCCTCAGGTGATACCCTTGGACATAATGAT
GAGGATTCAGAGCTATGGAATTTAGACAATGCAGAAAGTGTCAGCTTAAG
CACTGACAGTGGTATTATAAATGAAGATTGCTCTAAATTGCATTTAGATC
TTGATTACAATCACTTCAATTCTGCAGCCATAAAATTCCAAGATTTAGAA
AGTGATTTTTTTGATACCGACTGTGAGGCCATGGATAAATCACCAACCGA
TGATTGTTTTGAAACAAATCGTGGTGAGACCAAGGATATTGTTCGTTTTC
AAGATATAGagagtgatttttttgaaacagaTTGTGAGGGGGTGGACACC
AACACAAATGATAATACGGTGAAATTTCAAGATATCGAGAGCGACTTCTT
CGATGAAGACGATGAGATCTCACCTTCTAGTCTAGctctgaaaaacaaaa
caaaaacaactgtGGCCGGGTCATCTAAAAAAGAACCATGCGAAATtgat
caacaaaaacaaattctgACTCGATTAACCAGTGCTAAGGATAAGCGAGC
AACGATGACGAATAGTTTGTTACGTACCACGATTGAAGAACTGGAACGTG
CGTTGAGTAATAGTAATACTTTGTTGATTAAGCGAGACAAAAAGATTCAA
GACCTAAGGAAACATAACAATGAGTTGAAGAAAAGTTTGTCAGAGGAGCT
TGAAAACAGCGCACAATTAAAACTACTACTTCTTGAAAAAGAGGCTGTGG
TAAGTGAAAAAGAGGCTAAAATTGCGTCATATCAAACTGAATGTGAACGT
TTGAATCAAGAAATTACAGACTTGAGGCTATATCAATTGAACAATATGGA
AGACTTTTCGATAAGTTGCGATCCTTCTAATCTCGATAATTCAGTCGAAA
CTGACTTATTGGGTGATCAAGACATTACGTCATCACcaaatgtaaagaaa
aaatCGTTGAATAGAAACCAGTCTTCTTGTTCACGACAAGAGACGCCGAT
TTGTAAAAGTAAGCGAATGAGTAGCCCGGACACTACTTCACAACAAAAGA
CTAGCCCGTTTACAACCTCGACGACACCGAAAAGTACCATAGCTTCTAAT
ATAAAAACACGACCGGGAGCTTTATCAAAATCAAGCCCAGCAAGCCCTAT
GTCCCCACAGGGTGGGAAAGTTGGGAATAACCCAGACAACGTGAGTAGTA
CGGAACTTCACGCACGCCTACAAATGAAATTCATGAGGGATGCTTTCTTT
TATTACATGATTGGTTTTCATTCAGACGAACAAATAAATGCTATTTTGGC
TATATTAGATTACGGCGATAAAAGACAAGATTTTGTTCTTGAAGCTCACA
AACTGAAAAAGAATGGTAAGAAATTTAATGTGAGTAAAGTTTCGACACGT
GGGTTGACTTTTGTACAAGATATTCAACCTAAATGATAAAAGTACAgtca
aaacaacgttgtatgccaACTCGGGACATTTCTTGCTACTtgaactttta
ttttgttatgtaaaatatttttcttgaattatAATTTATGATAAACTTTC
TTGATgcattttcgaaaaagaaagtTTCTGTAGctcaaaacaccaaaaaa
aattatgtagaCTGCAATCAACCTNGATgcattttcgaaaaacaaagTTT
CTGTAACTCAAAACACCAAAAGAAATTATGTAGACTGCAATCAACCTCGT
TCCCTAcatattatcagctttttgatgtttattgatagcgctagataata
ccccggctagatattctctggcgtccatcagtaacataaataaagcctgg
aatacacggggacgaggttggacTGCAATAATCAGCCAGAATCAATAGCC
TTTCCTCA
Run BLAST on NCBI

transcript from alignment at scaffold_145:189781..199327-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00048673 ID=TCONS_00048673|Name=TCONS_00048673|organism=Clytia hemisphaerica|type=transcript|length=9547bp|location=Sequence derived from alignment at scaffold_145:189781..199327- (Clytia hemisphaerica)
AAGTTCCATCCAATAAGAGAGAACTGTAAATATTGTGTGAGTTCAAGTGA TAAAGTGGGATGTCTTCCCGAAATTAATGAAACTGTTTTTATGATAATCC TCTAATTAAGTGTTGTATATCTCTCCCAATTGTCTCATCTCTGGATTGGT TCAAAGCTATCTGATGTGAAGATCTGGTTTCTGTTAATTCGTTTTGTAGC TATCATTGTGAGTTTTAGAAAACCAAGATCTTCATTATTCGAACTTGCAG GACTGGTATTGGGAGACTGTGTATTTTTTTACCATGAGGTAAGTTGCAAC CTGCTCATCAAAACATCAAAACAATGGCCATCTAAAGTCCATGATATTTA TTACATGAATGATGAAACAACGTTGTAGGCCAGCTGGGAAGTTCTTTTTA TACTATAGGGTTTTTAGATATGGTAACTGCAATCACCGAATACCTCCACT GTCTCATTGTCGCGTTTGATTCATTATTCGCAATAAGGAGTAAAATGAAA GACTATTAAATCAATGTTAATGGAAAATCTTTTGCCCATGTTCAACCTCG TTTACTGCGTATTATCGGCTTTTTGATGCTTACTGATAGCGCTACATATT CTCTGGCGTCGATCCGTAACGTAAATAAAGCCTGGGGTACACGGGGACGA GGTTGGCTCATGTTATGATGAATTGACTGCATCGTTCCCGGAGATAATTA CCTCGTACCACTTGGCCCTTTAAAGGATAATTTCGAATTAAGTTAAGTTA CTTAAAAGATTTCAAAAGTGAAAACCCCATTTACACTCACCATAACCGTT TAGAATCNAAATTTAGTTAATTACTTAAAAGATTTCAAAAGTGAAAACCC ATTTACACCACACTCACCATAACAGTTTAGAATCATTACCATCTACAAAA CAAGATTGCATGACTTCTTTCTTATAATAATCTACGTTTGATTGTTTGCT GATAGAGATTTATGTCAACAGTGTTTGAAGACCTATTTAGAAACTTCTGG GTCCACATAAATAAACAAGCTCTTTCCATATATACATTCTGGTCAGAACT ATGAAAAGGGAAGTACTCCTGTTGGGCTAAACTGGGTTCAACGCTGAATT TATTTTAAACGGATTTCTTTTTCTAAATATGATACGATTGTAATTCATCA CAGTTTAGTATCGTTCTGTAAAGCTAAAAGCAGGCTCCCAGTTTTGATTT AGATCTCAATTACCAAAGTCAATCTTTATGATACAGCATTTGGTAAATTA GATTCATTAACTGGGAGATTTTTTATGTTTTGACGATTAGGAAACTATGA CATTTTACAATACGTAAGCGATACGGCCAGAAGTATTTGTTGGGCTCAGT TGGACAGGGTTCTTGTTTTATGAAAATCTGTATAAACTGTTTAAGCGTGT TTAATAATTGGGTGAAGCTGGTTGCTTGACTATGCACAACGGAAATTAGA AATTTTTATCCGTGGACGAATTTCTCTTCAAGTTTGCAGAAATGTTTGAT CGTTTGAAACGAGGTTTTACAAAATTCAAAGGGTATATGTTTTTCGAATA CTTTTATGTGTTAATTGCTTTTTTGGAAACATAATTGCTCAAATTTTAAC GGATTTATGTTTTTTTATGCATTTTTGCGGCTAAACAGCTAAACAAGGTT CAAACTATAACGCAGAAGCTTGGGTAGCTAGTTTCAGCTTCATAATGATG ATTTATTCGAGATCTCTCATTTAACACGGTCATAAAACTTAAAAAAGGAG TTGAAGTGTCGATCTTTTACCTGAATTTGATCAAATTTGGCTACATTTTC TTTTTAGTGTAAGGTCCAATTTTTAGACCCAGCTTTTTGCGAGCGCATGC GCTAGTTTTCTAAATCGTGATACATAAATGTTAAGGTAGAGGGTGTCTTT AGCTTGGCACATATTTTGTTGGTTTGAAATATCAGTCCTTTCAAACTTCA ACTTTTTCCGATTTTTTTTCTTAGAATGGATGCAGAGGATGGACCAAGCG AAGGAAAGTTTGTGGTCAAATATGTAGAACCATATGATGACGTCATCTAT TTTGTTAAAACTGTCACCGTCAAAGAGGTGAGGAATTTATTTTGCTAAAT CAAGTTTTATAACCCCCCTCTCTAAAAATCAAAGCTAACACGGTGTCTAC CTAAAAAAGCTAGGGAAATCTACACAGCTGTGTCGCGATTCAAAGTTCAG TACAGGAATTTTTATTTCGACGTGATCGATATGAGTGTAACTTTTTGTAT CAATGCTGTACTACACGTTTTTCATAAAGATATTAAAGTTTAATGGAGCA ATTTGTGTTTTGAGTCTAAGAATGTTCTTAAAGTGTTCTTAGCTTCAGCA TTTTGGGCTATTTTCCTAAAGAATGCATGTTTAAAAATGTTACTAATTAC AAATGCTCCCGGGGGGGGGGGGTACTAGGGTTGGCGAATGAGGGGTATAT GCGGACGGGACCTCCGAAAACCGACCCTTAGAGAGACTGATTTTTGCTGA AAAGGTGACCCTTAGGGAAACTTTTTGAATTTTTTTTTTAGATTTCTGAA AAAGTCATACCCTTAGAGAGACTTTATTACAATTTTTTCTCTGGAAATCA AAAAATTTCCTAAAAATCTTGAATTTTCCGACCCTTAGAGAGACTAATTT AAAACTTTCTGATTTTTCCGACCCTTAGAGAGACTTTGAAAGGTGAAAAA AGCGACCCTTACCGTCCGCACATACCATACCCATCATCCATTTTTGCCTA AGTCCCCCCCCCCCGGGCAAATGCTAGAATTCTCTTTTAAATTTTCGACT TAGAAGTCACGTGTTTTTATCAACTTCGTTCCCATGTAAAAACATGTTTT AAATCACTCTGCTTTCAATCGGGTTTCAATCTCTTTGGCACCATTTTGAT AAGCTGCCAGCAGTACCTAGAAATGCTTTCCTAAAACTTGACATCCTAAA ATGTTTAACCTAAAACGTTTTTTCTAGCTCTGCTAAGACTTTAAATCAAT ATCTTTTGGTAGAATGAAATCCTAAAATTCGGATATCAACCTTCAACGCC AATCTCTAACCATCAACCACCCTCACGCAAAAATACGCCCACTTGGCGGT AATTTGTAAACAAGCAAACAATCGAGCAAGCTTTATTTACAACATTACGT CACTAATTTCTCCTACAGAATGTAGACAAAAGTAAATGAGATTTGAAAAT GACATGCCAACATTTTACCATAGCAACAACTTGAGAGATAGGATAATGAG TTTTTTTTCAATCTCTGCTTAGATTAGAGAACTCAGTGAAAAAAAAAACG TAATTAACAAAAAATGTAACAACGTTTAATTCTCTGTGTNACTCAGTGAA AAAAACGTAATTAACAAAAAATGTAACAACGTTTAATTCTCTGTGTGATT TAGATAAGAAATGTTTTGAAAAAATTTTCTGACTGTCTGTAATAAAACGT GAGTGGGAAGTTTTGGAGTTTCGGATCGAATTACAGTAAAAAGGCTACTT AACAACTTGGTGTTGTTCTGTTGTATATTTTGTGTTTTTATTTGAAAAGA GAAATTGCATGTATTTTTGTTGACGTTTTGACGCGTCAGAAAAATCACAC ATAGGACGAAAAAAGTTTTGGCAATATTATATCGATTCGTATGTCAAATT ATAATTTCATTGAAAATCTTTTGGCATTTATTTTCATAATAGTACAAGAA TGAAATAGTAAAATACGTAAATTGAATTAATGGAGTTTTGATTTTGGAAA GAAAAATATATTATTGGATTGTTGTAAGTTGTACGTACTGGAAATTATAT CATGAAATTATTTGGGGTCTGGTGACGAGAAGAAAACTGGGAAAGATGAT CAAGTTTGCTATAATGTGTACGTAAATTTCGTATTACTTCCACGACCTTG CTATATTCACGATGACTTATATAAATTTCGACTATTTTAGACAACCTCCC TATCATGATATACAGATCAGATATTGACATGTTTTAATGACAATCATATC TAAATCAATCATAACATCACAGAACCTCAAGCGTTTAAGGTCAGATGAGG ACCAAGAGAGTTTACTGATTATACACCCCTGTATCATGAAAAACAAAAAA GGAAAGAAATTTACCGTACATCGTTCCTTCATTTGAACACCCCTGTGCTG AGACCCCAGCCCCACTGGAAAATCTAGCAAAAATTTCGTCTCCGGTGGGA AAATACCCTGAAATTTCAGCCCCACTGGGAAATTGACTTTGATTTCATCC CCATTTGAAATTCAATGTTTAAAAATTCCTCTCAAAACCCATCCCACTGG ATTTTTTAACCTTGGAACAATAGAGTTTCTATATTCCGACTGGGATTTCA ATAGGAGTTTTTATCCCCACTGAAAAAAGAAGTTCCACCGGGGCTGTTGG TGTAGTTGAAATGACCGAGATTGAAACAGGGATGTATGCATAACTTATTT ATGTTGTCACCATCATCAGTAAAATAAAATCACAAAAGCCTTTTTTTATC GATTTGACTTGCTACATGATCAGCAGGTAGCCCACGTAGTTTTGTAAAAT TAGTTTAAATATTTTGTCGAAAGCATTTGATCACTATGGTCATAAAATCA ATTACTTTGATAAATAGTCTTTTTTATTCTACTAGTAATTTCCTTTGGTT TTATGCTTGAACTTCCTTATATAACAGAAACTCTAAATAACAGCTAATAG TACACATTCCGCTCAGTTAAAGGCTAAATACTAAATGTACCACTGTTCTT ATACAAAACCCCCGAAGGTACTAGGTTTGCGAGGTGACGGGTATGTCAGA GCCAAAGTTCGAAAACCGATCCTTTCAGAGACTATTTTTTCCACCCGACA CTCGTTTTGCCCAACTACTTACCCTGGGATAAAAACAATGACTGTATCAA CGAACCATCCTTAATGAATGAGACAGGGGTGTCATAGAAAGGATGACGTT AGATTAACGCTCAAACAACTTGACGTGCCACCTGGATCCGCCTGGAACAA AAGAAACACAGACGAATTCCTGAACAAGAACTTATTGTACACTGTTACAC ATTAGTTAGATTTTCTTTCAACTGAAACTACTGAACTATATCAAAAACAT GATTACGTTCCACGAATTTTCTTCTTCTATGTCAATGATTAAATGCTAAA TACGAGCGCTTAAGCACAAATTGAACATCTCTGTTGAATGAGACAGACAG AATTGAATTAAATTAATCATATCATTAGCAAAGTGAGATTAGCTGAAAGC TCTGAAAACACACCTTTTCTCTCAAAGTCAACTACTTAGATGAGAGTCTC TATTTTAATTATCAAGCAGAGTTCTCGCTGACGAGTAGAGAGTTGGAGGT TATAAGTTTGTTTTGAAGATATAACTTTTTTGTTTTGTATTTAATCAGAA CGAATTATAAAAGCTAGTCATGAAAACAATCTTCGATGGCTCACCTTGGT GACTCTTAGAGAGAGAGAAAATTGTGTAAAAAATGATATGAGGAGAACTA TATATCAGAGTTATGTCCACTATCTCTCTTCTATTTTACATCGCTCTTTT ATAAGCGTCATATTTGATATAAAACATGAAAATATATGATATTAAAAATT AAAGATATGATTTTTTAAAGAAAATAGAAGGAACTTTTTAAAGAAGTGGT GAATAATTCGTTGTGAGGGAGTTGAAATTTGTGAGAGGTGAACATCAAGA AAGGTTGTGATTTTGATGAGGAAATTATAATATTTTGCTTGGCATAAAAC ATACAAGGAATAATTCAATTTTAAGTGGAAAAGGTAGAGTTCTTCAAAAT TATTTGAGTATGAAATATACTTTTCTTGGAACTAGAAAAACCTTTTAAAA ATTGTTTGGGTACTGTTAAAAGTTGTATCTTTATTAGTAAATTGTAGTAT TTGGATAGGTATTCAAGCTTGAAATTAATAACGATCTACTAATGAAGATC AATTCCTTAACTGTAAACAAACATGAACATGAAGGTTTCTTTTTTTTAGA AAGCAGCTTTAATTTGTATTTGTTAGTGTTTGAAACAAACTATGCTCAAA GAATATGTTTGGATGGAAACAGCCATCAGTAGTGATTTATCTTTTAACCT TTGTGTTTTCAATTTCTTTTATTCCAATACAATACTCTTCAGTTCTTGCT AAAACTATAAAAGTGTAAGAGTTGAATATTTTGGCTGAGGGATTAGTGCA ACTCAGTTTTTGGGATTCTGAAATAGAGTATTCGTTTGAGGCTTGTAATT TTTACCGTTTTTGGGCATTCTTGTGATGAAACACTAGTGAAGGTACAACC AAAATTTATGTTTTGTACGAGAATTTTCTTCTTCGATAAAGTCTTGATGA CTCTTTCGAAAATCATCTGCTAAGAGAGGTTTCCCTGTTGTTTCTTTTGG AAAAATTTCTTGAAAATTAAATAACAAAAGAAGTTTTCATAATATTTTTT CCTTTGTGAATTTTTTGAGGATTATAATATTTTCAGGGGAAGAGATTATA ATCTCTAGCGAGTTCGTTTAAAAACGGAAATTTTGAAAAAATTTTTGTGT AAAACTTTTGACTAACATATTTCAGAGTCTTTTAACATCTCCTTCTCACA GACCCGGTAGGATTTTTTCAGCCAGTGGGGATAAAAGTAACGGACTGAAA CTCGATGGGGATTGATATTCGGAAATGACATTCCCATATTTCCCATATTT TCTTATGAATGGGGATTCGAATTCCATTGTTTTCAAGTCAGAAGATTCAG TGGGGATGGAAAAAAGCATCGTATTTTGCAGTGAGGATTGGTTTATTTGG ATATTCTCTGTAGGGACAAAAATTTGAGTATTATTTTCCACTGGGGACGA TAATTTGACCAATTTTTCCAGTGAGAAGGGGTCCCAGTGGGTTTGTGAGA AAGGGGTGTATTTTACAATGATAATCCAAGTGGTGAGGGGGTCCAAATGG CCACTTGATTAAAAAACGACCGTACGTGCAGCCTAAAATTAGGGCTTTGA AATCGAACCCTTAAAAATTAGAGTAAATTTGGGCGAAAAATCGACCCTTA CAGTGCATTTTCTTTATTTTCTTGAAAACTTTTGACCATTTTAAGGCAGA GTATGGTCAGATTCTCTAAATTTTACACCCTTTTACACTTTTTCTCATCT TTTCTCATTTCGACTCTTATAGTTAACTTTGGGCAGTCAAAACATGTGAC TACTCAAAAAAATTTACGTGTTTTTGTTCCCAAGTTTTGCAGATAATGGC GGGAACTGGAATTCTGAATTCTGGGACAAGTCTCGTTAGAACCGTTTCAT AACCATTTTCTTTTCTTTTTTCTCCTAGATGAGTGGGCCTGAAGACGGAT TTCCTTATAACTCCATAATCCGCGAGACCGATTTGAGAGAGCTCAAAGAG ACTGACCTACTAGACTACGAAGACGATTTCCAAGAAGCGAATTTGACTTT ATATGATTTCATCGACGAAGAAAGTATGAATCAATTAAATAAAAACAAAG ATATGCCCTATCTACCGAGGGAGAAAGAAGCGAAGGCAGACAAGCTATCA GACAATCGTAACATGGAAAGCTCTACACTGGATATCAAAGAGTTAAGGTC AACCGATATTTCGAAAATTGCAGCGATAAAGGAAACGGATTTATGTAGTA ATGATGATGATTCGAGTACAGACGTCGAGCAACGTTCCCAAGAGGAAAGC GTGTCTCTGTCCTCAGGTGATACCCTTGGACATAATGATGAGGATTCAGA GCTATGGAATTTAGACAATGCAGAAAGTGTCAGCTTAAGCACTGACAGTG GTATTATAAATGAAGATTGCTCTAAATTGCATTTAGATCTTGATTACAAT CACTTCAATTCTGCAGCCATAAAATTCCAAGATTTAGAAAGTGATTTTTT TGATACCGACTGTGAGGCCATGGATAAATCACCAACCGATGATTGTTTTG AAACAAATCGTGGTGAGACCAAGGATATTGTTCGTTTTCAAGATATAGAG AGTGATTTTTTTGAAACAGATTGTGAGGGGGTGGACACCAACACAAATGA TAATACGGTGAAATTTCAAGATATCGAGAGCGACTTCTTCGATGAAGACG ATGAGATCTCACCTTCTAGTCTAGCTCTGAAAAACAAAACAAAAACAACT GTGGCCGGGTCATCTAAAAAAGAACCATGCGAAATTGATCAACAAAAACA AATTCTGACTCGATTAACCAGTGCTAAGGATAAGCGAGCAACGATGACGA ATAGTTTGTTACGTACCACGATTGAAGAACTGGAACGTGCGTTGAGTAAT AGTAATACTTTGTTGATTAAGCGAGACAAAAAGATTCAAGACCTAAGGAA ACATAACAATGAGTTGAAGAAAAGTTTGTCAGAGGAGCTTGAAAACAGCG CACAATTAAAACTACTACTTCTTGAAAAAGAGGCTGTGGTAAGTGAAAAA GAGGCTAAAATTGCGTCATATCAAACTGAATGTGAACGTTTGAATCAAGA AATTACAGACTTGAGGCTATATCAATTGAACAATATGGAAGACTTTTCGA TAAGTTGCGATCCTTCTAATCTCGATAATTCAGTCGAAACTGACTTATTG GGTGATCAAGACATTACGTCATCACCAAATGTAAAGAAAAAATCGTTGAA TAGAAACCAGTCTTCTTGTTCACGACAAGAGACGCCGATTTGTAAAAGTA AGCGAATGAGTAGCCCGGACACTACTTCACAACAAAAGACTAGCCCGTTT ACAACCTCGACGACACCGAAAAGTACCATAGCTTCTAATATAAAAACACG ACCGGGAGCTTTATCAAAATCAAGCCCAGCAAGCCCTATGTCCCCACAGG GTGGGAAAGTTGGGAATAACCCAGACAACGTGAGTAGTACGGAACTTCAC GCACGCCTACAAATGAAATTCATGAGGGATGCTTTCTTTTATTACATGAT TGGTTTTCATTCAGACGAACAAATAAATGCTATTTTGGCTATATTAGATT ACGGCGATAAAAGACAAGATTTTGTTCTTGAAGCTCACAAACTGAAAAAG AATGGTAAGAAATTTAATGTGAGTAAAGTTTCGACACGTGGGTTGACTTT TGTACAAGATATTCAACCTAAATGATAAAAGTACAGTCAAAACAACGTTG TATGCCAACTCGGGACATTTCTTGCTACTTGAACTTTTATTTTGTTATGT AAAATATTTTTCTTGAATTATAATTTATGATAAACTTTCTTGATGCATTT TCGAAAAAGAAAGTTTCTGTAGCTCAAAACACCAAAAAAAATTATGTAGA CTGCAATCAACCTNGATGCATTTTCGAAAAACAAAGTTTCTGTAACTCAA AACACCAAAAGAAATTATGTAGACTGCAATCAACCTCGTTCCCTACATAT TATCAGCTTTTTGATGTTTATTGATAGCGCTAGATAATACCCCGGCTAGA TATTCTCTGGCGTCCATCAGTAACATAAATAAAGCCTGGAATACACGGGG ACGAGGTTGGACTGCAATAATCAGCCAGAATCAATAGCCTTTCCTCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_030927XLOC_030927Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00048673-exon-scaffold_145-1575043694:199292..199327TCONS_00048673-exon-scaffold_145-1575043694:199292..199327Clytia hemisphaericaexon
TCONS_00048673-exon-scaffold_145-1575043694:197251..197353TCONS_00048673-exon-scaffold_145-1575043694:197251..197353Clytia hemisphaericaexon
TCONS_00048673-exon-scaffold_145-1575043694:189781..191999TCONS_00048673-exon-scaffold_145-1575043694:189781..191999Clytia hemisphaericaexon
TCONS_00048673-exon-scaffold_145-1510915933:199292..199327TCONS_00048673-exon-scaffold_145-1510915933:199292..199327Clytia hemisphaericaexon
TCONS_00048673-exon-scaffold_145-1510915933:197251..197353TCONS_00048673-exon-scaffold_145-1510915933:197251..197353Clytia hemisphaericaexon
TCONS_00048673-exon-scaffold_145-1510915933:189781..191999TCONS_00048673-exon-scaffold_145-1510915933:189781..191999Clytia hemisphaericaexon
TCONS_00048673-exon-scaffold_145-1491911889:199292..199327TCONS_00048673-exon-scaffold_145-1491911889:199292..199327Clytia hemisphaericaexon
TCONS_00048673-exon-scaffold_145-1491911889:197251..197353TCONS_00048673-exon-scaffold_145-1491911889:197251..197353Clytia hemisphaericaexon
TCONS_00048673-exon-scaffold_145-1491911889:189781..191999TCONS_00048673-exon-scaffold_145-1491911889:189781..191999Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_145supercontigscaffold_145:189781..199327 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0 0 0.0891929 3.03284 7.55213 7.01161 1.35384 1.09522 2.04049 1.10187 0 2.7347 1.49262e-08 1.95625 1.85534 0.258181 1.77984 0 3.52664 0.012154 9.37156e-08 0.201557 1.74846 4.53704 3.12272 1.11978e-07 0.00466868 0.404801
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00048673 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top