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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00048704 ID=TCONS_00048704|Name=TCONS_00048704|organism=Clytia hemisphaerica|type=transcript|length=883bp
tgtttatagattttctttctcacaaaatgaatttcgaatgcaattaaaat
gttcgatgaaaaaaaaatgtaagaaaaaacattaaaatcaattttgtaag
cAATAGCGCCGCATCGAGAGTGTGATTAatgattaattgctctctacagg
atgcaattaacgattaattgctcttcgaaggcgcgccaaataagaaaaaa
taactcatcgtgcgattataaGTATTATTAACACTTGCTATTTATTTGCA
TACTGCTTCAGATATGGGATTGCTTGTTTTTGATTGTAAATAGGTACTTC
CTGTGGATAGTCCAGTGAATCAAgcattttttttaatgagaGTCTTTTGA
TAACTTTCACGACCAGTCGTCCGGTTATTCTGTAAGCAGACNGAGTCTTT
TGATAACTTTCACGACCAGTCGTCCGATTATTCTGTAAGCAGACGATATC
tacggaaatttcaaaattcattgtcgtAGAGTGTAATACGCTTCGTTATA
CTCGAGATACGCTCTGGTACAAATTGGTCGCCAGACCTATGTATAAAATT
AAACTAAACTGAGTGGATATCTAACCATGCCTTAGTTTTAGAAAATTATT
GTTCATTGACAAGCTATATTGCAACATTCCGCCCCAGTCATGATTCCTTA
CTAGGGAACTCTTAGGCTGCTGACACCCACTAACTGATTCGTGCCCGCTA
TACAACATGCGGTTTTAAAGAGATCTGCAATTCAGACTAGGGAGCTCCTA
GTAATGAGTGAGGATTACAGAACTCTACACTTTTTTAGCATaatattttc
tatatttttttgtatatagCTTATTTTCTATCGTCATAACACCGAATTCC
ATACTTGAAATATAAGAAAATCTCTAAAATATG Run BLAST on NCBI transcript from alignment at scaffold_145:112457..113339 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00048704 ID=TCONS_00048704|Name=TCONS_00048704|organism=Clytia hemisphaerica|type=transcript|length=883bp|location=Sequence derived from alignment at scaffold_145:112457..113339 (Clytia hemisphaerica)
CATATTTTAGAGATTTTCTTATATTTCAAGTATGGAATTCGGTGTTATGA
CGATAGAAAATAAGctatatacaaaaaaatatagaaaatattATGCTAAA
AAAGTGTAGAGTTCTGTAATCCTCACTCATTACTAGGAGCTCCCTAGTCT
GAATTGCAGATCTCTTTAAAACCGCATGTTGTATAGCGGGCACGAATCAG
TTAGTGGGTGTCAGCAGCCTAAGAGTTCCCTAGTAAGGAATCATGACTGG
GGCGGAATGTTGCAATATAGCTTGTCAATGAACAATAATTTTCTAAAACT
AAGGCATGGTTAGATATCCACTCAGTTTAGTTTAATTTTATACATAGGTC
TGGCGACCAATTTGTACCAGAGCGTATCTCGAGTATAACGAAGCGTATTA
CACTCTacgacaatgaattttgaaatttccgtaGATATCGTCTGCTTACA
GAATAATCGGACGACTGGTCGTGAAAGTTATCAAAAGACTCNGTCTGCTT
ACAGAATAACCGGACGACTGGTCGTGAAAGTTATCAAAAGACtctcatta
aaaaaaatgcTTGATTCACTGGACTATCCACAGGAAGTACCTATTTACAA
TCAAAAACAAGCAATCCCATATCTGAAGCAGTATGCAAATAAATAGCAAG
TGTTAATAATACttataatcgcacgatgagttattttttcttatttggcg
cgccttcgaagagcaattaatcgttaattgcatcctgtagagagcaatta
atcatTAATCACACTCTCGATGCGGCGCTATTgcttacaaaattgatttt
aatgttttttcttacatttttttttcatcgaacattttaattgcattcga
aattcattttgtgagaaagaaaatctataaaca
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00048704-exon-scaffold_145-1491911889:112457..113339 | TCONS_00048704-exon-scaffold_145-1491911889:112457..113339 | Clytia hemisphaerica | exon |
| TCONS_00048704-exon-scaffold_145-1510915933:112457..113339 | TCONS_00048704-exon-scaffold_145-1510915933:112457..113339 | Clytia hemisphaerica | exon |
| TCONS_00048704-exon-scaffold_145-1575043694:112457..113339 | TCONS_00048704-exon-scaffold_145-1575043694:112457..113339 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_145 | supercontig | scaffold_145:112457..113339 . |
Blast
The following BLAST results are available for this feature:
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