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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00048712 ID=TCONS_00048712|Name=TCONS_00048712|organism=Clytia hemisphaerica|type=transcript|length=951bp
ggttgATATATGATTTCGGCATGTGCTTTTCACAGTACAAAAGTCTACTG
ACTGCAACCATACAATATGATTCGCAGTTTTCCATCTATCCGTGGGTGCC
TGTAAACATGGTACTAGTACTAGTCTTGTAGAAGANATGATTCGCAGTTT
TCCATCCATCCGTGGGTGCCTGTAAACATGGTACTAGTACTAGTCTTGTA
GAAGATGTTAAAACGAAAGATTTAGATAAGATTTGGGTAAGATCTCAGAG
AAAGCAGACTGCATTTTGCATGCGTTTAGGATTTTGTAACGCAAGTATGA
TCTGTAGTTTTAGTATTATGTTTGTGAatgtaaagaaaaaatgtttaagA
AACATAGAACGTCCTGGGACTTTAGCTTATAGACATAActgttcatacaa
aaattatgggaaacgcatatttgNGCAGCATAGAGACACTGATAAACTAC
TTTAATGTTTATGTGACATAGCCACCACCTAACCAACAACTAAATTTCTT
ATTCGTTTAATGTGTGGAAATAAGGCACAGCGGGTAATTACATTTCAAGC
TTTGGCAACTGGCTGACTATATATGTAAAAATTTATTGCAAGGAGTGtcg
gaaaaaaaaatctctgactttctgaaaatcttgaaattctgaaacttttt
ttttctacaagTGAGTCCTGCAATAAAATAGGCTAATTTGTTTGTGAGTC
CAAAAGCAGACTCGCAGTAGTAGCAAAAAAGATTGagccggggggggggt
caaATGTAGAATAGAATCAAGGATCGAAAGAAAAATAGGATCACGGATCA
AATGAAGagtaggatcaaggatcaaaagaagataaagatcaaggatcaaa
tgaagaataggatcaaggatcaaatgaagaataggatcaaggatcaaaag
aagaaaaggatcaaggatcaaatgaagagtaggatcaaggatcaaaataA
G Run BLAST on NCBI transcript from alignment at scaffold_145:281858..282808 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00048712 ID=TCONS_00048712|Name=TCONS_00048712|organism=Clytia hemisphaerica|type=transcript|length=951bp|location=Sequence derived from alignment at scaffold_145:281858..282808 (Clytia hemisphaerica)
CTtattttgatccttgatcctactcttcatttgatccttgatccttttct
tcttttgatccttgatcctattcttcatttgatccttgatcctattcttc
atttgatccttgatctttatcttcttttgatccttgatcctactCTTCAT
TTGATCCGTGATCCTATTTTTCTTTCGATCCTTGATTCTATTCTACATtt
gaccccccccccggctCAATCTTTTTTGCTACTACTGCGAGTCTGCTTTT
GGACTCACAAACAAATTAGCCTATTTTATTGCAGGACTCActtgtagaaa
aaaaaagtttcagaatttcaagattttcagaaagtcagagattttttttt
ccgaCACTCCTTGCAATAAATTTTTACATATATAGTCAGCCAGTTGCCAA
AGCTTGAAATGTAATTACCCGCTGTGCCTTATTTCCACACATTAAACGAA
TAAGAAATTTAGTTGTTGGTTAGGTGGTGGCTATGTCACATAAACATTAA
AGTAGTTTATCAGTGTCTCTATGCTGCNcaaatatgcgtttcccataatt
tttgtatgaacagTTATGTCTATAAGCTAAAGTCCCAGGACGTTCTATGT
TTcttaaacattttttctttacatTCACAAACATAATACTAAAACTACAG
ATCATACTTGCGTTACAAAATCCTAAACGCATGCAAAATGCAGTCTGCTT
TCTCTGAGATCTTACCCAAATCTTATCTAAATCTTTCGTTTTAACATCTT
CTACAAGACTAGTACTAGTACCATGTTTACAGGCACCCACGGATGGATGG
AAAACTGCGAATCATNTCTTCTACAAGACTAGTACTAGTACCATGTTTAC
AGGCACCCACGGATAGATGGAAAACTGCGAATCATATTGTATGGTTGCAG
TCAGTAGACTTTTGTACTGTGAAAAGCACATGCCGAAATCATATATcaac
c
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00048712-exon-scaffold_145-1491911889:281858..282808 | TCONS_00048712-exon-scaffold_145-1491911889:281858..282808 | Clytia hemisphaerica | exon |
| TCONS_00048712-exon-scaffold_145-1510915933:281858..282808 | TCONS_00048712-exon-scaffold_145-1510915933:281858..282808 | Clytia hemisphaerica | exon |
| TCONS_00048712-exon-scaffold_145-1575043694:281858..282808 | TCONS_00048712-exon-scaffold_145-1575043694:281858..282808 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_145 | supercontig | scaffold_145:281858..282808 . |
Blast
The following BLAST results are available for this feature:
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