TCONS_00048763 (transcript) - C. hemisphaerica

Overview
NameTCONS_00048763
Unique NameTCONS_00048763
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3803

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00048763 ID=TCONS_00048763|Name=TCONS_00048763|organism=Clytia hemisphaerica|type=transcript|length=3803bp
gttagaaaaaaagtttcaaaagtttcaagaaGGTGTTTTTTGAACCGCTG
AGAGATTGAAATGTGAAATGTAATCCGTTTTATTTGTATTTCATTTGGTG
GTgccttttttcttcaaatctccCTGCTAACGGTTCTtttgctaattcga
actcaaacaggaaatttcatttgttcgaattacacagaaattcgaatcat
agaaagtattttaagagggtttctccttgactggggactggaaacaagtt
cgaataaCAGAAAGATTTGAAGGAGTTGGAATGAGCGAGAGTACTTGAAT
TGAAAAAGCCTAATGATGAGATCGTTCTTCCGACGTGGTTCGTTTAGCGT
GGTTCAAGCGAGAAGAAAAGATAGTAAACAAAGGCGACACACTCTGCCAG
ATACTCTGGAACGTTACGCACACAGGACGTCCCTACGGCGTGAAAGCGAC
GACGAGTCACGACTCTCAATGGAAAAGAATCTGCGCCAGTTAGAAACCAT
GACGTTAGATCGTAAAGAGAAGAAAACCTCGAAAATCAAGAAATTCTTCA
AGAAGCTATCCAATAAAAAGGACGCTGCCAAATACGATCAAGAATTCTCA
TCTCGCAACGATCGCTTACCTTCAACAGACAGTGAACACAGCACTCAACA
TATTTCGAACTCTACCGGATACGATTTAAAATCTCGGCGCCGTAGCGATG
GTACGATATCTTTGTATAGTGTCAGCGAAACGAACTATTTAACTCAAGCC
ACGCCCTTGACAAAACGTCGCTTGTTTGCCATCAATCTGTCATTCATGAA
GAAGGGGCGACGGCGTAACAATAACAGTATAACGACACATAACGATTCTA
CGTCTTCGCAACCTTCGGAGACGGTACGGGCGTTATGTAGCCCTTACGCT
AATCGACGGAACCGACTTACGCCCATGACGCCCATCTCAGCAAACGGACG
ACGGGCGTCAGAATCGACTGTTTACAAAATACAACACAATAATGACTTAA
ATACGAACTTATTACTACAACGACATAACACTGCTACTGGTTTAACATCA
ACGCCCTTAAGACATTCAGGCAAAAAGTACAGAGCGCCCCAACCACCCTC
TCATATTTCTTCCACCCAAACGACACCCCTTGATGCGGCTTTTAGAACAA
AGACTATAATAAGCCCGTGTGCGTTTCCGCCGATGAGTTCGCGCGGTGAT
TCATCGCGGAGTAGCACTTCTTCAGGTGATGAGGAGGCGGACTATATCAA
TTACCCTTTTTCCAAATCGAACGTAAAAGCTCCACAAAAACCGAACAGAA
CTGCTAGCAAAGGTAGTTGTCCGGATGGATATGGAAACCGTTCCAACTCA
TTGAGCAGCAGCAGCAAAGCATCCAATGAGGATTACCCTCCATCAACGAA
ACATCACGatttggttttcaaaaataaacgaCATTCTCTCACTTCAGATG
ATTCGATGATCATGTCCTCTGAAAGCTTGTCCTCGTCACAAGGGCACGGA
AACAACGAAGTATTCGACCGCCAACATTCCGCGCGGAAATCGAATACGCG
TGCTGATAGTTCGTTACGCAAAACACCCTTACGTAATTCAATCGATAGTT
ACAATCGATTGCTGGAAGTTCATCGACACACAATCGATAAAATCGCCTTC
GAAGTTTCGAGACTTGTGTGCACTTGCCAACAACTACAAACGACGGATTG
GAATAATTATGAACgcagtgatgacgtcattcagcTCGGTGTTCCGGGTT
ATATGGTGGTTCCGGTGACTTGTGCGAAATCGGAACAAAAGAATTATACC
GCTTGGTTACGCATCAATGAAGGTAACGAAATCCAATCGGCAAGCTCATC
CAACCTCACAACAACCACGCTCCACAGAAACTGTTTACACATTTGTCACG
TGATCGAACCAACCTCGCCTACCCCAACAAACGAACAGCCATCAAAATCA
ATCGAGTCAAACCGCGCTTTCATTTCGACTCAGTTACCCAAAATGCCGTT
ATCTAAATACGTTTCGTCGACCATCGAAAAACACACCAGGTATCCGGAAA
TTTACGAGCGAGAAACGGCACTCATTTTGTTACAAGTCGTTAAAGGGGTT
TTACACCTCGTTCGAAAAAGAGCTCCAATCAAAACAGTCAATGCTGAAAA
CATCTTCATCTTAAATACAGGTGGCTCTGACCCTACTGCTGTCATTTCGC
CCACTCAACAATCACCGAAATGTCCGTCGGTAGTTGTCGGTTGTTTACCG
GGAATCGGTGATCAGTCGGTATCAACGAGTTCTACCGACGTTATTACGAA
TTTATGTCACCAGATGGCGTTTTTACTTTACGAACTTTTGCACTCTTCAT
TCGAAGAAGAGCTCAAGTTAATTGTTAATTCTCCGATGTTGTTTACGACT
TTACCCGATTTAACGATCAAATCGATTTACAGTCGATATTTACAATCGAT
CATCGATAAACTTTTAGGCACACCACAACACACTATAAATTCGTTAGATG
AGTTAAGATTAACCTTGGAAGTGATTTTATTCGGACCGACCGATATATGT
GATCACGAGGAAAAGGAAGCTCTGGATCTGATCAAGAAATGGCATAATCG
TCGTTGCGTTGATATGGTTACCTACATTCTGAAGGAAGCTCCTCTTATTA
TGTTGTGCGCTTCGGAGCATCACGGACAAGAAGTTGAGAAAATTAAGAGA
GTTGATCAAGAGATTTTATTGGAGTGTGAGTTCCTGTCTAGTATTATGCC
GGTAGATATTTACCGAGTTTCAAAAGAGCTGAGACGATAATTTGTGATCC
AGAATtggactttcgatttcaagtattttgttaatatgGGGTAGAATGCA
TGCAACTGATCAATCTTGATATTCCAAAAGACTTTTTTGGTGTCTTATGA
TTTAAAATTGTTAGCATTTAGTTTTAACATCTTTTGATTCTATCGTAGGT
GTACATTTAATGGTGTcgaatcttaaaattttgggaTACGAGTACTGGAC
TATTAGAGAACCAGAATTTCTTTAGAAAGTTCCAACAGGTCAGAAATTTC
TTTGTCCTGTGGGAATTTTAACATGCATTGAAGTTAAATAGGGCGCTGTA
TTTTTTAAAATCTATAATCAGGCGACACAAAACAAATACTAAAGGCTTGA
GATGAattggagtttttataagatactttaatgaTTGAAGTAATGAAAAT
AACGTGtccattagaaaaatataacaaaattgttttgttactggttaacg
accaaccaaatcaaataagagcttgtaaaaacttcatctcGTCCCAAAGG
CTTCTACCCTCCTGCAAAAGACCACTGGACCAcaccgccaggaggaagga
aaGGCTCTTTATATCGTAACAAACAATACCGACTTATCAACATTCAGAAT
TAAAGTGAGTCGACTGCAATCAaagtagatttatttttgttaaataaGTA
AGCGCTCTAAACAATTTCTTATggtttttattcaatctttacgTTTTAGT
TAAAGTGTAAATAATTTTAATCTTTTGAACATTTAACGAAAGACTTTATA
AATTAGGGGTTTATCCTTAGAGGATGTGGGCACATCGTTAATACCACAAG
GAATATGGTGCTTGGTTATATGGCTTATTACATTTAGCTTTGAGATATAA
GGGGAGGCTGGGTGATTAATCCGTGACCGCCCTGTATTTTTATGATCGCC
TCAGCTTAACAGTTTTTTTAACGTTAGATTTTTAGAACAATCGAATTTAT
TATACACGCCTGTGCTCACATCCTTTAAAGATAGCCCTGATATTATATAG
AGA
Run BLAST on NCBI

transcript from alignment at scaffold_146:390534..402679-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00048763 ID=TCONS_00048763|Name=TCONS_00048763|organism=Clytia hemisphaerica|type=transcript|length=12146bp|location=Sequence derived from alignment at scaffold_146:390534..402679- (Clytia hemisphaerica)
GTTAGAAAAAAAGTTTCAAAAGTTTCAAGAAGGTGTTTTTTGAACCGCTG AGAGATTGAAATGTGAAATGTAATCCGTTTTATTTGTATTTCATTTGGTG GTGCCTTTTTTCTTCAAATCTCCCTGCTAACGGTTCTTTTGCTAATTCGA ACTCAAACAGGAAATTTCATTTGTTCGAATTACACAGAAATTCGAATCAT AGAAAGTATTTTAAGAGGGTTTCTCCTTGACTGGGGACTGGAAACAAGTT CGAATAACAGAAAGATTTGAAGGAGTTGGAATGAGCGAGAGTACTTGAAT TGAAAAAGCCTAATGATGAGATCGTTCTTCCGACGTGGTTCGTTTAGCGT GGTTCAAGCGAGAAGAAAAGATAGTAAACAAAGGCGACACACTCTGCCAG GTAAAGTAATAGCCATCGTAGCTTTAAGCAAGAAAACTTTAATAAAACTT ACTTACTCTTTTGTTTGAGTTTCTTTGTTTGAGGTTGAGTAATCAGCTTC GGTGAGCGAGGAAAACCTTTTAGCCAGCTAGATCTTTCCGAACCAAAGAC TTGAAAATAATTATTTGATGCCACCTCCATCAAATGGAAGAAAGCTATCA AGGATGAGGGAGAAAACGAAGGAAAATGGGAGTCTACCGGCCCTAGACAT TAACGAGTTTAATTCTTTTGAGAACGGATGAATGACTGAAACGATTTGGA ATATCCCGCATTTTTGACCTGCAAATCGAGGACTCTAGTCGAGAAAGGAG CCTTAGGATCGTCCTCGACTAAGGTCGGAAAGTTATGTATTACCCATGTA TATATACACCTTTTCGACCGTAGTCGTGCGGTCAGGCGCGTGCCACTTAG CTATTTAATTATCCCTAAACTTGATCCAATCCTTTTTTGACACAATAATA GGTGTCTATATTGGGACGGTTTTAGTGGGATAAAGCGGACAAAAAAATGC CCGCGCGGCAATTGGCGGCTACGGTCGAAAAGGTGTATTGAAATGAAGCT CCTGGGTTTAATACGAAAGGACTGGGACGAGCGATATTCGTGAGATGTAA CAGAAGACTTTGAGGACTCTTCACGCTTTGTTTATATAACTGATCCATCA GTAATTCTGTCTTCTCGTCACTTCACTTTGGATTCTCTCGTGTAACAAAT TGCGTTTTGTTTACATTGTAGTCGCGTGTATAAGCACCATATTGTTTTAC AATCACCTTCTGACGTCAGCAAAATTAAAAACCGCGAGTGTCGATTTTCC CTCATGCTCCTGTCTCCAATTTTCACTTTCAAGGAAAGTAAAAATATTAA AAGATATCTTTCATCACAACAGAAAGTAAAAAGTACACTACTCAGAGTTT TGTACTACTGCAGGTTTATTGAATGATTGATGTAATTATATCCTGTATTC TGTTGTGATGCAAGATAGCTTTTAATATTATACTTGGCTCAGGCTTCATT GAGCACTCTGCGACATCGATCACGAACAAAACTTTCAAGGGAAGAACAAA GATCTCCTTTGACCGTAAAAATATGAAAACCATATACATGTATCTAAGGA AGACTTCTTTGGCTTGGCCTCCCGAGGAGAGGGGTACTTAGGCAAAATGG GTGCCGGGTATGTGTGCGCCATAAGGGCCCCTTTTTCACGCCCTCAAAGA TTGAGTCTCTGTAAGTATTCCAAAATTAGGAAAATCAGAAATCAGCTCCC TGAAAGGGTCATAAATTTATGAAATTAGTACCTAGTACCCCCCCCCCCCN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNCCCCCCCCCCCCCCGGTAACATTCTTCGTCT GTAGATATTCTATTTCTACTATCAAATCAATTATAACCTCCATTGACTCA TTTTGTGTCCCTTTTCTTAAAGACGGTAAGGTTAGTCTCCTACAACTTGA ATGTCAAGCGCCTCGAAAATTGTTTGAGTTATTTATGGAGAGATTTGAGT TAAAAAGAGATTCTACAGTATTTTGTACGACCATTATTGTACACCTCCAA CTCCCCTCTCACCAAGGTAGAAATACACTCAACCTCTTTAAATGAGACAA AGGTCCTCGAAAAAGTCCTACAACAGGAATCTCCGTAATTCGAAATTATT GATCGAATTAGAGAATGAATCAACTGCACTCATGACATGTGCTTGGAGTA GTGTGTACCGTACCTTCCAACTTATTCGATCTACGCCTGACCTTTCGGCT CTGTTTACATTGTAAGGGATTTCCTCTTTGTTTGAAAGCAAAGTGAATAT TTACTTATCATACAAACGTCAATCTCATTATAAGCCTGTTACAGGAAATC TAAGAATTTTCGTTCTGGCTTTAAGCTCCATATATCATGCAACGTACTGG CTTAATACAAGCATGCTTTGTTGTTAAAAATTATATGTTTTTTGTAAGAA ATTCTTTCGCTTGCTGCTTTGAAAAGCCCTTCGTATACCCTTGTATTCAA TGTTGAGTTATCTCGAATTGACCCTGGGAAAACAGTTTTTTTCTTTCTGA TGACCCTGGAAATAAGCCAGATAGTTAAAAGGAAGTAGAAATGGTAACTA TCTTATCGTGCAATGGTTTAATATCCGATGTTAGCCTTCTTTTCTTTCTA AAACAAAATTTTCTAATATCAAATCAACATGGAGGCAACATGCAGCTTTT CCCGTTCATTATAGCATTTTCTCATACGTATTCAAGTGAGGAAAAACCGT CAGAAAAATATTTAATCCTCAACTTGTCAGCATGACTATCGGGAAGCTCG TTGTGGTAGGTTCTGAGGATACAAAAGTGTAGTACGACTTGATATTTTAG TGGTGAGGTTTTCTTTGGTTATAAACTCTCTTGTTTTCCTATAGGAGTCT TTTGTTTCGAAAATTGTCTGTCTAAGAATGACTTTTTCGCAAAAAGAATT TCTCCAAGGGTCCGTATTCTGAGTTCCAGCCCGCATATACCTGATATTTT CTAGCCCAATATAGATGTACATTTTAGAAATACTGTTCAACCCTTGTATT GTATTCAATCTACCCGAATCTACTGCTTAATCTAATCTGTAATCCTTATA GAGACTTGGGAAGGTTAAAAAACATAACATAACAAGCACCTTTTTTTTTA CCTAAATACTGTCTGTTTTTAATTTGAAATCAAGTTCACTTTCCTTAAAG CTGTCTTTGTATCGTTTTCTTTCTCTCTGAGTCAATTCTGTGGGTTGCAA AATTATCCCGTCCCTCAGATTAAAGGTTTCTATGAAAGCCAAATACGAAA ATTTGCAACGGGAAGTCAGAAAATTAATCAAAGATTATAGACATAGCGTA GAAATTTAAGCTAGTTTGATTCAGTCACTAGAAAAAATCTGATGGTTAGT AACTGAATAACAGTATTCCAAGCGCAGAAAAAGCTATTTGGCTGTGTGAA TACGGGCTTAGTTACATAGGCTAGATAATGCAAGCCTAACTTCAGTTTAC TGGAAAATTTTCAGGAAGCCCTGTTGTCGTTGCAATAGGAGCTGAAAGAG TCATTCTATTTTCCTCTAATTTTAATTTTCGACCTAATAGTATTTGTTTG TCTTGTTTATTGACTTATAAAGATTTATTGAATTTCCATATGTTTGTGAT TTGTTTTGTTTTGAACACTTTTCGAATGTATGTGGTAATCTCTTCATGCT ATTGGTCGTCATGTTTGTTGATTAGCCAATCAGTGATAATCTTGTAAAAT TGAGCTATTTAATTGACCAATCAGAATTGATCTCATGAAATTGAGCCTGT CTATGGGTCTCTATTGCACTTTCAATAATTTGCTGGTGTATAAGACGTTT TTTTACAAGAACAATCTATAAGAGAAGAAGGCTTCCATGGCCAGAATGTT AAGAGCATTTTTAAGACTTTGTGGACTCTAAAACACCCAATTTCTTAAGA AATTGCCGCAAAATACTCATAAAGCGGTGAAAATAAACACACCAAGAATA GTTCAAAACTTTTGGATGTTCTTATAAACACTTGTAATGCACAGATTTAT GCTTTGCATGTCTTCAAAACAACAAGATGCTTGATTGATAAAGTTTGAAT TGCAGAACCTCTACATCCGTTCATAGGACAATACTCCACCATTGAAAGAA AGCCTGTTACATCAATTTACTTGTATCCGTCAAAAAGATAAAGATCATTT GAATTATTACGCGGTGTTTTTGTCAATTTGATATCATTATGATCTCGTTG GAGATTTTATCTTGTGAAACAATTTCCTAACCTATACTGAGGTTTTTTAA AAGAGCTTCTCTGATTGGCTGATATGGTATCTCACTACAAACAACTTTGA AGAGAGAGAGAGCAAATACGTAAAGCTGTTGCAAAGAAATCCCCTTTGAA AGAGTGTAAATCCTTTTGTATTGGATTAAATCTTAAAGATTAGAAGCTCT CAGAGAGAATCTCGCTTTGAAGAAATTCATTTTGCGGTAGCAAGTCATAG TGAAACAACCGGGTTGGCTTTTGTTCGCACTGTTTCGTGAGAAACTTTGG TATTTCGTCACATGCTTAAATTGCTAAGTGATTCGCTTTTATTTTTCAAA ATCTTCTTTTGATGGTTATAAGGCTTTATCATCACTCATTCACACACATT CAAAAAAGTTACATCAAGTTTTATCGTATGGTAACATTATTTATTTCAAA GTTTCATGACGCGATTGGTCGGTCGATCTGAGTCAAGTTCGACTTTCATT AACAGAGGAATTTTTGGAGATTCGTTTTCGTATTGTTTTACATGATTGTA TTTATTTGTTGACATCAAATTTTGTGATGGAAGAGATCACTAGTTTCTGT TGCTGAATTTGAGTTTATAAATCTCCCCTGAAATTACACTCGTGGAGCTC AAACCAAAACGTTGTTTGTTTGTTTGTTTGTTTGTTTTTGAGAGATGAGA CATTGGCATTATGTTTATGTTATTAACCAAACTACCAGTAAGAACTCCTT ACTACAAAATATCCTGTAATATAATTGCTATAGTTGACGCTCTCTAAAGA CCATGTTCAGACGTTACGGTTCCGTATCGTTCCGAGAAACGAAACGGTTC CGAAACAAGTGTGAACATCAAAATTCGAAACGTCAAAAAAGAAGACGTTA CAAGTTAAAACAGATCTAAACGGTTTCGTTCCACTTTTTTCATCGGAACG GAACTCTTCCGTTTTCTTGCTCCGAAACGTTCCGAAACCAATATGAACAC ACTCGATCTGTAACGTAAACCATACCAAGGAAACCATACCGGAACAATAC AAAACCGTAACGTCTGAACATGATCTAATTCGACGTTTCTAATATTCGAT AAGCTCTCTTGTTTGATGAGAATCCAATCCCCCTTGCTTGAAAATCGAGT TAGTAGTAGCATAAAAGGTTGTAAATTCCGTCGTTAAATCATTAAAGAAT GTATATAGCTTTCAGCGAAAGGATATTTTTTTCTAGTTTGAATGGGGTTG TATTGTTTGTAAACTTGAAACGGGATAATCCATGACACAACGATATATTC ATGGCCCGGGGGGGGGGGACTTACGCAAAAATGGATGATGGGTATGTGNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCAACCA GCCATTAAATACGCTGGAAAAGCATGGTGACATCGAGTCTCGGCGGATCC AATAATTGTAGTGGTTGTTTGGAAAGAGAACTATAGAGCAACTTCATTCA ATATTCAAATATACAAATGGCACAACTTTAACGAATATATTTCTCTTTTT CAGATACTCTGGAACGTTACGCACACAGGACGTCCCTACGGCGTGAAAGC GACGACGAGTCACGACTCTCAATGGAAAAGAATCTGCGCCAGTTAGAAAC CATGACGTTAGATCGTAAAGAGAAGAAAACCTCGAAAATCAAGAAATTCT TCAAGAAGCTATCCAATAAAAAGGACGCTGCCAAATACGATCAAGAATTC TCATCTCGCAACGATCGCTTACCTTCAACAGACAGTGAACACAGCACTCA ACATATTTCGAACTCTACCGGATACGATTTAAAATCTCGGCGCCGTAGCG ATGGTACGATATCTTTGTATAGTGTCAGCGAAACGAACTATTTAACTCAA GCCACGCCCTTGACAAAACGTCGCTTGTTTGCCATCAATCTGTCATTCAT GAAGAAGGGGCGACGGCGTAACAATAACAGTATAACGACACATAACGATT CTACGTCTTCGCAACCTTCGGAGACGGTACGGGCGTTATGTAGCCCTTAC GCTAATCGACGGAACCGACTTACGCCCATGACGCCCATCTCAGCAAACGG ACGACGGGCGTCAGAATCGACTGTTTACAAAATACAACACAATAATGACT TAAATACGAACTTATTACTACAACGACATAACACTGCTACTGGTTTAACA TCAACGCCCTTAAGACATTCAGGCAAAAAGTACAGAGCGCCCCAACCACC CTCTCATATTTCTTCCACCCAAACGACACCCCTTGATGCGGCTTTTAGAA CAAAGACTATAATAAGCCCGTGTGCGTTTCCGCCGATGAGTTCGCGCGGT GATTCATCGCGGAGTAGCACTTCTTCAGGTGATGAGGAGGCGGACTATAT CAATTACCCTTTTTCCAAATCGAACGTAAAAGCTCCACAAAAACCGAACA GAACTGCTAGCAAAGGTAAAGCCGACAATTAAATGTTTATACCACTGATA TAAACCCTTGAGTCAGTCCCTTAATCCCAACCAACTATGATCTTTATTGG GAATTTAATAGATATCTACGTTGAGTGGGCTTACCATTTGGGTACCAGAT TATTAAAGACCAGCGATTAAATAGGTTGGATACTGTTTTTTTTTATATTA CTCCGACCTTACTGATTGACTATACTTGACTTACACTAACACTATAAATG ACTGATTTGATTTTTATAAAGGACAACTTCCTCGAAGCAATTTCGCTACG TTGTGTTCTATGACGTCACCTTAGGTTCCTTAAAGAAAGAAATTTTGGAA TGAATTTGATTTGGCGGATTAATTTAGTGCTATTTGATATGAAAGAACCT GTTTTAAATCTGAGATAGCATATATTTTGGGAATGAATACAATACCGAGT TTATGTATTTGCACATTTGAGGACGGTAAAGTGACTGAAGCGATTTGGAA AAACCGCAATTCCGCCCCGCAAAATCGAGGACGGTAAAAGTGCTGATTTA CCGTCGTCCTCAGCTGGTCAGGATCTATTCAAATTAGAACCTTACCGTCT CCGTCGCTGAAAAACACAAGTACATAAACTCGCTAATAATCTTAATTTGG CGGGAACTAAATTTCCCGCCAAACTGTCTTTCCTTATGGTAGTCACTTTA CAGGAAAAAAAGAATTCATTTTAAGAAAATGGGGCTAAGCAATAAAACGA AAAAAACTTTATCGTGAGGCCATCGACAGAGTCAATTTAAAGCAATTAAT TTTTCATTAAACTTGTCGCTTAAGTTTGCTCTTTTCAAATCGCCGACTTA TAAAAGAAGCCAAAATTTATTGCAAATTACCTTTTTATTAACTTGATTGC TTTTGTAGTAAATGTATTTTTTTGCGACGTGTAAACCAACCCTTTTCATT TTCCTTTCCAAACACGTGTCTAGCATGCTAAACAACTAATTCAGACTTTG TAAAAAAAAAAAGCAAGCAAGTAAGTTAGGAAAAACTGATATTATACGAT TATACCGCAAGAATTATCTCATCATATAACAACCATATTACTGTATGACA TACCTTTAGGAAAGAAAATTTGGCGGATTTGGCGGATTCAACCTAAATCC GCCAAATTAAGTTCCTGCCAAATTTAATTTTTCCCATCATCCTCCAAATT TAAATTGCTGTTTTCATCGCCTCAAATGTGGGCTATTTCAGGCATTAAAA TATCTTTTTTCTTATTTAATAGAAATTCATAATATTTTAATCGTTTAATT TTTTTGCCCAAAAATTTCCTTCATTTAAATTCCCGCCATAATTTCTTCCC TTAAGGTAGATTATAAACGACTATTCAAACACCCGGTTTCTCTCTTAACC TTATATCACCTTCCTCCACGTAGGTAGTTGTCCGGATGGATATGGAAACC GTTCCAACTCATTGAGCAGCAGCAGCAAAGCATCCAATGAGGATTACCCT CCATCAACGAAACATCACGATTTGGTTTTCAAAAATAAACGACATTCTCT CACTTCAGATGATTCGATGATCATGTCCTCTGAAAGCTTGTCCTCGTCAC AAGGTATGACGTCATTCTAACAACGTACAACTGACATTCATAGCGTCCAT AAAATGCTTCACAGACACACGCTTTTTCACAGTCTGTGCTTTGAGTTTAA GCCTGAAAATACTCTTAAAATGCACTCTTTTTGAACACTGCACACAACAT ATTTATTTTCACCGTGATTCTTGAACAAAGCTTTAATTTTGACGGCCCAG TTTTCGCCCTGCCTATTCTGATAGTGATTTAAAGTGGGCAGAAAATGGGC TGTCTAAAGTCAATGCATTGCCCTCGTCATCAAATGGTATGAGCTAAGCT CGATAGACCTTTACATAAATTACATCACGAACAACACTTACCTCAATTTT AAAATATTGACTCACAGAAAAGTTTATAAGAAGTTTACTCTGTATTGAAA TTAACACTTGAACACTCAAGGGATTTGATCACCTTGGTAATAGTTTCAAA ACGAAACAGTCGCCAAATAATTTATGAAAAGGTCTATTACCCTTAATTCA TTTCAACCAAATAAGGTGTACCTCATTCCAAATCATCTCTTCAATGTCAC AGGGCACGGAAACAACGAAGTATTCGACCGCCAACATTCCGCGCGGAAAT CGAATACGCGTGCTGATAGTTCGTTACGCAAAACACCCTTACGTAATTCA ATCGATAGTTACAATCGATTGCTGGAAGTTCATCGACACACAATCGATAA AATCGCCTTCGAAGTTTCGAGACTTGTGTGCACTTGCCAACAACTACAAA CGACGGATTGGAATAATTATGAACGCAGTGATGACGTCATTCAGCTCGGT GTTCCGGGTTATATGGTGGTTCCGGTGACTTGTGCGAAATCGGAACAAAA GAATTATACCGCTTGGGTAAGGATTAGATCTTTCCAGTCGCAATGTATTG TTTTAGCTTTTTTGTCAAATTTTCCTTTGTTATAGATAAAAGGCAAGTTG CATACTTTTTGATCACGTTACCAAATTCTCCCCTAGGGATTGGTCTAATT TCTAATCAGATGATCAAAAAGTATGCAAAACAAGTCGATTTGCGAACGCA AGCTCTAACTGTTAACAAAAGAAAGAAACAAAAGCCTTCCAGACCGGGGT TTTTTATAATGACTATGGTATCATCATCGTTTACACCTCCTCTTTTCCCT TCATAGCGACTTTTTGTAGATCGTCTACTCATCATAAGACTCCAATTTGA AACTACATTATGTTAAAAAGAGTTGCAAACACTTTGACCTTTCTAAACAG TTTTACAGTTTGTCGTTGAGAATCGAAAGCGTTGTAATGACAAGGGTTTT TATTTCTTTTGCAGATGCTTTTGTTATACTGAGAAACTTTCTTGGCAAAT TTAATACTGGAACTTCCTCCTCGATTTCCGTTTTTACATCATATCTTGAC ATTCCCAATAATTTATTGATTTGAAACCTCTATTATAAGATTTAAATCAT CTTATTTAAAACGCTGTACGGTGGAGATTTTTTAACTGGAAACTCCATAA CTTTAATGTTTTTTTGTGTTTCCAAAACGTGTTTGATGACTCCGCTGTAA AATATTTAAATTATCTCATTCATGTATTTCTTTCTCCAATCCACAGTTAC GCATCAATGAAGGTAACGAAATCCAATCGGCAAGCTCATCCAACCTCACA ACAACCACGCTCCACAGAAACTGTTTACACATTTGTCACGTGATCGAACC AACCTCGCCTACCCCAACAAACGAACAGCCATCAAAATCAATCGAGTCAA ACCGCGCTTTCATTTCGACTCAGTTACCCAAAATGCCGTTATCTAAATAC GTTTCGTCGACCATCGAAAAACACACCAGGTATCCGGAAATATACGAGCG AGAAACGGCACTCATTTTGTTANGCATACCAGGTATCCGGAAATTTACGA GCGAGAAACGGCACTCATTTTGTTACAAGTCGTTAAAGGGGTTTTACACC TCGTTCGAAAAAGAGCTCCAATCAAAACAGTCAATGCTGAAAACATCTTC ATCTTAAATACAGGTGGCTCTGACCCTACTGCTGTCATTTCGCCCACTCA ACAATCACCGAAATGTCCGTCGGTAGTTGTCGGTTGTTTACCGGGAATCG GTGATCAGTCGGTATCAACGAGTTCTACCGACGTTATTACGAATTTATGT CACCAGATGGCGTTTTTACTTTACGAACTTTTGCACTCTTCATTCGAAGA AGAGCTCAAGTTAATTGTTAATTCTCCGATGTTGTTTACGACTTTACCCG ATTTAACGATCAAATCGATTTACAGTCGATATTTACAATCGATCATCGAT AAACTTTTAGGCACACCACAACACACTATAAATTCGTTAGATGAGTTAAG ATTAACCTTGGAAGTGATTTTATTCGGACCGACCGATATATGTGATCACG AGGAAAAGGAAGCTCTGGATCTGATCAAGAAATGGCATAATCGTCGTTGC GTTGATATGGTTACCTACATTCTGAAGGAAGCTCCTCTTATTATGTTGTG CGCTTCGGAGCATCACGGACAAGAAGTTGAGAAAATTAAGAGAGTTGATC AAGAGATTTTATTGGAGTGTGAGTTCCTGTCTAGTATTATGCCGGTAGAT ATTTACCGAGTTTCAAAAGAGCTGAGACGATAATTTGTGATCCAGAATTG GACTTTCGATTTCAAGTATTTTGTTAATATGGGGTAGAATGCATGCAACT GATCAATCTTGATATTCCAAAAGACTTTTTTGGTGTCTTATGATTTAAAA TTGTTAGCATTTAGTTTTAACATCTTTTGATTCTATCGTAGGTGTACATT TAATGGTGTCGAATCTTAAAATTTTGGGATACGAGTACTGGACTATTAGA GAACCAGAATTTCTTTAGAAAGTTCCAACAGGTCAGAAATTTCTTTGTCC TGTGGGAATTTTAACATGCATTGAAGTTAAATAGGGCGCTGTATTTTTTA AAATCTATAATCAGGCGACACAAAACAAATACTAAAGGCTTGAGATGAAT TGGAGTTTTTATAAGATACTTTAATGATTGAAGTAATGAAAATAACGTGT CCATTAGAAAAATATAACAAAATTGTTTTGTTACTGGTTAACGACCAACC AAATCAAATAAGAGCTTGTAAAAACTTCATCTCGTCCCAAAGGCTTCTAC CCTCCTGCAAAAGACCACTGGACCACACCGCCAGGAGGAAGGAAAGGCTC TTTATATCGTAACAAACAATACCGACTTATCAACATTCAGAATTAAAGTG AGTCGACTGCAATCAAAGTAGATTTATTTTTGTTAAATAAGTAAGCGCTC TAAACAATTTCTTATGGTTTTTATTCAATCTTTACGTTTTAGTTAAAGTG TAAATAATTTTAATCTTTTGAACATTTAACGAAAGACTTTATAAATTAGG GGTTTATCCTTAGAGGATGTGGGCACATCGTTAATACCACAAGGAATATG GTGCTTGGTTATATGGCTTATTACATTTAGCTTTGAGATATAAGGGGAGG CTGGGTGATTAATCCGTGACCGCCCTGTATTTTTATGATCGCCTCAGCTT AACAGTTTTTTTAACGTTAGATTTTTAGAACAATCGAATTTATTATACAC GCCTGTGCTCACATCCTTTAAAGATAGCCCTGATATTATATAGAGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_030992XLOC_030992Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00048763-exon-scaffold_146-1575043694:402280..402679TCONS_00048763-exon-scaffold_146-1575043694:402280..402679Clytia hemisphaericaexon
TCONS_00048763-exon-scaffold_146-1575043694:395765..396676TCONS_00048763-exon-scaffold_146-1575043694:395765..396676Clytia hemisphaericaexon
TCONS_00048763-exon-scaffold_146-1575043694:394177..394356TCONS_00048763-exon-scaffold_146-1575043694:394177..394356Clytia hemisphaericaexon
TCONS_00048763-exon-scaffold_146-1575043694:393314..393627TCONS_00048763-exon-scaffold_146-1575043694:393314..393627Clytia hemisphaericaexon
TCONS_00048763-exon-scaffold_146-1575043694:392351..392583TCONS_00048763-exon-scaffold_146-1575043694:392351..392583Clytia hemisphaericaexon
TCONS_00048763-exon-scaffold_146-1575043694:390534..392297TCONS_00048763-exon-scaffold_146-1575043694:390534..392297Clytia hemisphaericaexon
TCONS_00048763-exon-scaffold_146-1510915933:402280..402679TCONS_00048763-exon-scaffold_146-1510915933:402280..402679Clytia hemisphaericaexon
TCONS_00048763-exon-scaffold_146-1510915933:395765..396676TCONS_00048763-exon-scaffold_146-1510915933:395765..396676Clytia hemisphaericaexon
TCONS_00048763-exon-scaffold_146-1510915933:394177..394356TCONS_00048763-exon-scaffold_146-1510915933:394177..394356Clytia hemisphaericaexon
TCONS_00048763-exon-scaffold_146-1510915933:393314..393627TCONS_00048763-exon-scaffold_146-1510915933:393314..393627Clytia hemisphaericaexon
TCONS_00048763-exon-scaffold_146-1510915933:392351..392583TCONS_00048763-exon-scaffold_146-1510915933:392351..392583Clytia hemisphaericaexon
TCONS_00048763-exon-scaffold_146-1510915933:390534..392297TCONS_00048763-exon-scaffold_146-1510915933:390534..392297Clytia hemisphaericaexon
TCONS_00048763-exon-scaffold_146-1491911889:402280..402679TCONS_00048763-exon-scaffold_146-1491911889:402280..402679Clytia hemisphaericaexon
TCONS_00048763-exon-scaffold_146-1491911889:395765..396676TCONS_00048763-exon-scaffold_146-1491911889:395765..396676Clytia hemisphaericaexon
TCONS_00048763-exon-scaffold_146-1491911889:394177..394356TCONS_00048763-exon-scaffold_146-1491911889:394177..394356Clytia hemisphaericaexon
TCONS_00048763-exon-scaffold_146-1491911889:393314..393627TCONS_00048763-exon-scaffold_146-1491911889:393314..393627Clytia hemisphaericaexon
TCONS_00048763-exon-scaffold_146-1491911889:392351..392583TCONS_00048763-exon-scaffold_146-1491911889:392351..392583Clytia hemisphaericaexon
TCONS_00048763-exon-scaffold_146-1491911889:390534..392297TCONS_00048763-exon-scaffold_146-1491911889:390534..392297Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_146supercontigscaffold_146:390534..402679 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.101491 0.0380454 0.198989 0.0860338 0.825106 0.72229 0.00383062 0.288288 2.62049e-07 0.876026 0.00199418 0.0235629 0.878835 1.21408 0.20032 0.367215 0.908792 1.21683 0.782782 0.20672 2.16823 1.64481 0.900184 0.309384 0.493588 0.757717 3.51313e-09 0.000957664 1.19906 0.637756
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00048763 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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