TCONS_00048845 (transcript) - C. hemisphaerica

Overview
NameTCONS_00048845
Unique NameTCONS_00048845
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length830

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00048845 ID=TCONS_00048845|Name=TCONS_00048845|organism=Clytia hemisphaerica|type=transcript|length=830bp
CGTTGCTTGAACAAGAATTGTTATTATTACTCATGGTCAAGTTGGTCAGC
TACTTGTGGAAACGGTGTCAAAAGAACAAGACAACTTCGAAAAACCAGCA
ACAGTTATTACACCGTCAAAGCTGTCAGTGAATGCTCAAAGTACAAAACT
ACTTGTGATAATAATCTAATTGAAACCAAGAATTTGGCTAAATGTCCAGT
CCCATGCAAACACAAGAGCTGTTCGTATTACGGTTGGTCCTCGTGGTCGG
CAACTTGCGGATCAGTCGAAAGATCTCGAAAACGTTATTCTTTAAAAGAT
GTCACAACTTATGTCAAAGAAAGCAAAGATTGTGACAAATATCCAAAATC
ATGTGAATTAtacgacaaacaaacaaagactCTCGCTAAATGCCcaaTCC
GCTGCTTGAACAAGAAGTGTTACTATCACTCATGGTCAAGTTGGTCAGCT
ACTTGTGGAAACGGTGTCAAAAGAACAAGACGTTTCAGATATTCAAGCAA
TTCTTATTACAAGGTCAAAGCTGTCAGTGAATGTGCTCAATACACAACTG
CTTGTGATAGTACACTTATCGAAACTAAAAATCTAGCTAAATGCCCTGTG
CCATGCAAACACAAGAGTTGCTTTTATTACCGCTGGTCCTCGTGGTCCGC
AACTTGTGGATTAGTCGAAAGATCTCGAAAACGTTATTATTCTGGAGATG
TCACAACTTATGTCAAAGAAAGCAAAGATTGTGACAATTATCCAAAATCA
TGTGAATTGTAcgacaagcaaacaaagactcTCGCTAAATGCCCAATACg
gtgtttaaagaaaaattgttatTATCACTC
Run BLAST on NCBI

transcript from alignment at scaffold_147:139386..151777-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00048845 ID=TCONS_00048845|Name=TCONS_00048845|organism=Clytia hemisphaerica|type=transcript|length=12392bp|location=Sequence derived from alignment at scaffold_147:139386..151777- (Clytia hemisphaerica)
CGTTGCTTGAACAAGAATTGTTATTATTACTCATGGTCAAGTTGGTCAGC
TACTTGTGGAAACGGTGTCAAAAGAACAAGACAACTTCGAAAAACCAGCA
ACAGTTATTACACCGTCAAAGCTGTCAGTGAATGCTCAAAGTACAAAACT
ACTTGTGATAATAATCTAATTGAAACCAAGAATTTGGCTAAATGTCCAGG
TAAGAGAAAATTTCAAAGTTCTGATGTTCTTTTGATCCCGGAGGGGGGAG
TGGGTATACGAACCAACGGTATATGCGGCGAAAAAATTGGGATTGGCTTT
TAGAATCGCACCCTTAGAGTTCAGCAAAAGATAGATAGATAGATATGCCC
TCTGATGCATCGGAATGGGTCCTATCCACGATGGAGTAGGAATCACAGCG
CAAGCAGACATTGCAACCCTGCAGATGCGAGCTGTCGAGCCATTGTGTAT
ATCACGACACTCGAACTACACAGGAGAACGGATGTCCTCGCAGGTGTAGA
ACCTCCCAAGTGTCACCAAGTACACAACAATGTCTGGAATATCTACCCAT
ACTCTTGTATCAGAGTTATGGCACCCGATTCCCCTCACATGGCACGCTTT
GATCCGGGTGAAGGAGCATTCACTTGCCAAGTGCTATGGTTCAGCAAAAA
ATCGGTGAAATTCATACCTTTTACAGTCCATCTTCTTTTAGATAAAAAAA
TCAGGATTTCGGGCTAAAAATTAACAATTTTTCCTGTACTTGCTGAATTT
CCACTCTTACAGTGCATTTCTGCTATTTTGAAAAATAAACCTTTAACCGC
CGCACATACTATCCCGGGTCCTGATCTCTGTTTTGCCGAGGCACAAACGA
CCTAGGTCCTGGAGAATGNCGTCGGTCAATTTCCCTGACTGCCAATGCAT
CCCGGGTCCTGATCTCTGTTTTGCCGAGGCACAAACGACCTAGGTCCTGG
AGAATGCAAGAAGGTTTTGAGATAATGAAGGTTTTTCTTTACAGTCCCAT
GCAAACACAAGAGCTGTTCGTATTACGGTTGGTCCTCGTGGTCGGCAACT
TGCGGATCAGTCGAAAGATCTCGAAAACGTTATTCTTTAAAAGATGTCAC
AACTTATGTCAAAGAAAGCAAAGATTGTGACAAATATCCAAAATCATGTG
AATTATACGACAAACAAACAAAGACTCTCGCTAAATGCCCAAGTAAGATT
TTTTTTTAATGTGAAGTTTCTTTGAACTCTTTCGTTGGTCAACGCCAACC
TAAATGACAATGTATTGATAGGATTTAACCTTTCCTTCTTANGCAAAGAC
TCTCGCTAAATGCCCAAGTAAGATTTTTTTTAATGTGAAGTTTCTTTGAA
CTCTTTCGTTGGTCAACGCCAACCTAAATGACAATGTATTGATAGGATTT
AACCTTTCCTTCTTATATAAAGAACAATGAATGAAAAACTCGGGAAAAAA
ATTCATCTTAAAAATATTTTTAGGCTCAAAACCGAAAAAGCTAAGAACAT
CCAAGGCTTTTTTGACGTTCTTAGTAAAGACGTTGGAGCATGCACAGCTA
AAATCAAAGTTAAAGCTAAAGTTAAATTACTTCTACTAAACATTTCTACT
ATCCTTTAGTCCGCTGCTTGAACAAGAAGTGTTACTATTACTCATGGTCA
AGTTGGTCAGCTACTTGTGGAAACGGTGTCAAAAGAACAAGACGTTTCAG
ATATTCAAGCAATTCTTATTACAAGGTCAAAGCTGTCAGTGAATGTGTTA
AATACACAACTGCTTGTGATANNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNAAAATTTCAGCCAAATCGGACCATT
TTTGAAGTCTCCAGTCTGCCCCCAAAGTTTTAGCCTCGTTTTGGCGAAAA
CTCGTCCCCAGGCCCCAAAAATTAAAATTTTGAAAAAATGAAAGAGCACC
CCCAGGGATTTGCCCAGGGATTAAGTGTGCAAAATTTCAGCCCAATCGGA
CCCTTTTTGAAGTCTCCAGCCTGCCCCAAAGTTTTTGTGACAGACACACA
GACAGACACACAGACAGACATTCTCAGATTCTAGCTCAACTGAAGTTGAG
AAAAATGAATACCAGCATGAAGTTTGGTAATTATTTCTCCACTACCTTTT
TTTTCAGTTTTCCATTTAAGTTAAAGTTAAAAAAATCTTTCCTTTTCTTT
TGGAATTTAAAAATATTTCAAGAACCAAAATTGCAAATTTTCAAGAATTA
AGATCGATCAATTGTAAAAGGGGTTACGCACGAAACGAGACTCGTGTTCG
CAAGCGAAAGGTTTTCTCAAAAGGACGTAAAAGTACTGACTAAATTTGTA
AACAAACCGTATGCAGCGGGATACAAAATCAAAAAACAAATGTCACATGT
AAAAATAAAAAGTCAAAACAAAAAAGGCTGATTTTGATTGTTTCAATTGT
TATACATGTTTATTTTGGATTTTAGTTGTTCTTTTTAATGACACGTGGAA
TGTTTACATTTTACTATTTTTATGTCCCTTTAAACGTCCTAAATTTTAAG
CCGCGAAATAAATCTTTGCGGAGATTCAATGGCACGAAAAAAACCTAGTT
AATAACACTAAATAACTCGAAAAGTTAAAAGCTCAAGGAAAATCGAGTTA
CCGTTTTTTAATGATTAATTATGACTAATGACGTCACAAAACTGAAATTT
TGACTTCATATGCAAAATAACTCGTCATTGTTTTTCTAAAACTGGAATAC
TTTTAGGGTAGATAAGGGAATTTCCGATCGAGGCGGATATATCAGGACAG
AATATCACGTGACCTAAGACGTAGCCTGGGTATCCAGACTCAAAATTTTA
GAAAAAAACTCTTACCTCATGACATACAAAGTTTCTAAAATTTTAGAGTC
TGGTGCAACTAAAAAAGTCTGATACAGTTTGTTTGATACTGTATGTGAGT
GAACCCTTGTTGACAGACTATCNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNGAAAAACTCGATAACCCAAATTTATCTGGTCGC
CGGTCGTGGTCGCTGGTCGTGGTCGCCATTTCTGGTCGATGTTTAGAAAC
TCCCTTCAAAACTACTTTAAACTACATCAAAACATCAGCCACATTTATAA
AGGCTCCTTTCCAGCGGCCATTTTGTTTAGAAATGAAGCTGTGTTTACAT
TTTCATTTGTTTATATTATTTTGCAATGTCAGCTTTTTTCCATAAATTAT
GCGCGCGCATAGAAAAATATCGAAAAGCCCGCGAAAATTCTGCTCAATGA
CTCGAAGCGAATCGACCAATCAGATACACTCGCATATGCAGCGACAACTA
TCCCTGCAGACGAGTTAGTTGGACCAGACCGTAAACCAGAGACAAAATAT
AAAAAAACTAAACGGTGAAATAGTTTACGGTCTGGATATCCAGGCTACCT
AAGACGGGAAAAATCAGACTTATTAATAGAACTAATGAGAAGGCACAAAA
TGATAGAAAATAGTGCATATTATATCATTATTATTTTTAGTGCTGTTTGC
CAAAATTATTCAGCCAAAAAGGGCAATTATCTGAAATGAAAGAATGACAA
AATTGAGAATGTTTTAGGGAGCGGTCATTAAGTATAACATATACCGGGGC
GGAAGGGATTTGGGTAGGGCATGAAACTTTTTCCCTCATTTTAGGTAGGC
TATGAAAATCTTTTCCCTCATTTTAGGTAGGGTATGAAAATCTTTTGAGC
TGTGCTTTATTTTTGCAAAAACTTTGATTTTATCAGCCTTAAAGCACCAA
TATTCTTGTAAACCACAAAATTTCAAAAACTTCAAAGTTTCATAAAATAG
GCACCAGGGGACCTTTCAGTCTAAAATTTTACAGAATGACTAACTTTTAT
GCATAGATCAATACTACATAAAAAGATTTCTGAAAATCACCTTCCTTTTA
GAAGTCAATTTTTGAGGTGGGGCCGATAAACCAAATTTTTGTGTTTTAAC
ATTTTACATATTGGCTCCTCAAAACCATAAATTCTATGACTAGGCTCTGC
AAAACCATCAATTTTACATGCAGGATTTTCAAGAACATCAATTTTACTAG
TAAAGTAGCCTCAAAACCATCAACTTCTCAAGTAGAATCTTACATGCAAT
CAATTTCTCTATAGTTGGTATGAATTAGTATTTAATTATTACTATACCTA
CTATGTACAACGTTAAATAAATTGGTAAATAATAAAAAAATAAGTGAAAT
AAAAACCATCAATTTTGCAAGTAGGATCTTCAAAACCATCAATTTTACAA
GCAGGATCTTCAAAACAATTAATTCTACAAGTGAGATCTTCAAAACCTTC
AATTTACAAGTAGGATCTTCAAAACCATCAATTTTACAAGCAGGATCTTC
AAAACAATTAATTCTACAAGTGAGATCTTCAAAACCTTCAATTTACAAGT
AGGATCTTCAAAACCATCAAATTTACAAATAGGATCTTTGAAACCATCAA
TTCTACAAGTAGGATCTTCAAGACAATCACTTCTTCAACTTAGGATCTTC
AAAACCATCAATTTTACAAATAGGATCTTCAAACCCATCTATTTTAAAGT
AGGATCTTCAAAGCCATCAATTCTGCAAGTAGGATCTTCAAAAACATTAA
TTTTACAAATAGGATCACCAAAACTATCTATTTTACAANATAGGATCTTC
AAACCCATCTATTTTAAAGTAGGATCTTCAAAACCTTCAATTTTACAATA
TAGGATTTTCAAATCCATCAATGGGCTTTTCCAGAAAAAAATCGTGCACC
CCCTGTTGAGGAGGTCCATTTCCGTTCCAAGGGGGTAAGGTTTGAAATGC
AGTGGAATTCCATAAGGGTAGACGAAAATCCGTCAAAAATAAGCGGAATT
CCGAAGGGGTAATGATTGAAAATTTGTAAAAATTCGGAATTCCAGAGGGG
TATGATCCTGAAATTGCCTGGAATTCCAAGGGTGTAGGTCACAAAAGGTT
TGACCTCCTCAACAGGGGGTGCACGGTTTTTTTCTGGAAAAGCCCAATTG
TACAAGTAGGATCTTCAAAGCCATCAATTCTGCAAGTAGGATCTTCAAAA
ACATTAATTTTACAAATAGGATCACCAAAACTATCTATTTTACAAACAGA
TTTTTCAAGACCATCAACTTCCCAAGTAGAATCCTAAAAACCATTATTCC
AAGTAGGATCTGCAAAACCATCAACCTTACAAATAGGATCTTTAAAACTA
TCAATCATACAACAGAACAACGGCAGCAAGAATCTTCAAGACCATAAATT
CTACAACAAGAATCTTCAAGACCATCACTTCTACAACAAGAATTTTCAAG
ACCATCACTTCTACAACAAGAATTTTTAAGACCATCACTTCTACAACAAG
AATTTTCAAGACCATCACTTCTACAACAAGAATTTTCAAGACCATCACTT
CTACAACAAGAATTTTCAAGACCATCACTTCTACAACTAGGATCTTCAAA
ACCGTTAATTTTAAAAATAGAATCTTCAAAAGCATCGTGTTTAATTAAAA
GCACGATCTTTAAATCATCAATTCTAGAAGTAGGATCTTCCAAACCATCA
ATTAAACGTAAAATCCTCAAAACCATCTAGTTTACAAGTAGTTACTTGAT
TCTATAATTAGTTTCTTCAAAACCATCAATTCTACTTGTAGCATAAGTTA
TCAGGTATTTAAAGAACAGCTCTCTTGCAAAAATGATCCTTTAAGGTGTG
CGTATAGTTTCTGTCGGGGTGTGAAATATACATTGCCCCCACATTGCCTT
TTTACGCTAGCTTTGTTGAAGCCCAAACAGGGCATTTAGATGAAAGTGTT
GTTTCATGTCTATGCGGCTGGTAGGNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAGCCGTTACTAGCAACCC
TGCCCTAAGCAATTCCAAACAACAAAACCAAACAACAAAACCAAACAACA
AAGATGAGATACTCCCGTCCATGTACGGAAAGAAAATTTGCTGCTGAGCC
TGAAAAACTACTCAATTTCAAGCAATTTAGGGGTCAAAGTAATAAAAATT
GAGTATAATGCCTAAAATACCTCACTTACATCCTATTAATAAGAACATGA
TAAGGCTCAAAATGCAAAAAAAAGAAAAAAGAACCGTTGAGGCTCAGAAA
AATTTAATACTGGTTCTTAAATAAAAAAAAAGTGTGCTAAAGAAGAAAAA
AAAATCTCATATATACTGGGAAACATTTTCATAATCTGTAAGAACGTCAA
AAGGAAAAAAATTCCCCTAGCAGAAGCTATTTTATAATTTTCAAAAGCAT
GTTGCAGAAGCAAAAAATGTCACATAGTAATTGGCAATCATAATTTCCAA
AAATATCAACAAAAAAAAAGTCGTCATGCCAGGAGATTGCTTGGGCAAAA
ATAAAAAAATGTAGTGTTTCCGGAAACCGGTCGGGTGATAATAACAATTT
TCTGACCTGGCCGCAGACTATGGGTTCATCTATCATCATAAAAAAATCAA
GTTGGAGCGTTCAAGCTATCAAAATAGTTTGGTTAGATATTCCCACTTGT
AAATCAAGATTTGTTTGTTAGTAGTNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCGGGCGACGTTTC
CCGATTGGGAAGGAGGATAGAGCGCCGTACCCTTATTTTCCCCCGACGTT
TCTCGAAGAAATGACGTCGCCTCGTATGAAAAACACCTTACTGTTTTTCA
CGCCGGAGCTCGATTTAAAAAGAGATTTGGAAAAAATCCATTACGTAATG
CTTCCAACAGACAGTCGGGTGCAGGCGACAATTCTCCATATTGGGACTTA
AGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTGGGACTTAAGACAG
TTGCACACGACGACGAAAGTCTGAATGGAAACGAGGCTGAAAAAGGGTAA
AAATTGATTTTATCACCCCGCATATCAGCTTTTTTTCCTACGCTTTTGCC
TAAAGAATCGCACTCGCTCGCTGCGCTCGCTCGTGCGTAATTAATGTAAT
TCTTGTAATTTACTGATGATTTTTAATTTTCATAGAAAAATTTTTCTTCG
AACTTTTCTTTCAGTCCCATGCAAACACAAGAGCTGTTCGTATTACGGTT
GGTCCTCGTGGTCGGCAACTTGCGGATCAGTCGAAAGATCTCGAAAACGT
TATTATTCGAAAGATGTCACAACTTATGTCAAAGAAAGCAAAGATTGTGA
CAATTATCCAAAATCATGTGAATTGTACGACAAGCAAACGAAGACTCTCG
CTAAATGCCCAAGTAAGATCACTACCCTCTAACTTTGTCAATGTTATAGA
TGAATGATAGAGTGGATAGGTTTTTGGACAGCAGAATTATAATTGGCTTT
TTTTTTAAATCACGCTATTAGAATTGTTTTCATTTAACATGCACAAACCT
GACAGGCAAATCTGTTTCGTTATTTAAATATCTTTTTCAACTTTATATTT
TAAAATTTTCTACTATCCTTTAGTCCGCTGCTTGAACAAGAAGTGTTACT
ATCACTCATGGTCAAGTTGGTCAGCTACTTGTGGAAACGGTGTCAAAAGA
ACAAGACGTTTCAGATATTCAAGCAATTCTTATTACAAGGTCAAAGCTGT
CAGTGAATGTGCTCAATACACAACTGCTTGTGATAGTACACTTATCGAAA
CTAAAAATCTAGCTAAATGCCCTGGTGAGTGAAATCTTTTTCTTTATGAA
GAGCCTAAAGATAGTGGTCAAATTTCGATTCATTAGCTTCACGTGTCAAC
TGTGTCACAGCGTACTTTTTTAAGTAAACAATCTTCGATCAAAGGGTCTG
ATATAACTCTATGATTCCTATAATACCTATTTATACCTAATTATGACTAG
AGAGAGAGTATCGAATGCAAGTTTTTATACATGAATATATTTTGCTTTTC
TACTTTTTTTTCAGTGCCATGCAAACACAAGAGTTGCTTTTATTACCGCT
GGTCCTCGTGGTCCGCAACTTGTGGATTAGTCGAAAGATCTCGAAAACGT
TATTATTCTGGAGATGTCACAACTTATGTCAAAGAAAGCAAAGATTGTGA
CAATTATCCAAAATCATGTGAATTGTACGACAAGCAAACAAAGACTCTCG
CTAAATGCCCAAGTAATAAGATAGTTATTTGTTACTTTTCAAATAATCAG
CATTTTAATTCTATGAATTATTTCCTACTTTTCGCTTATTACAAGTTAAT
GGGGTAATCAAATGGTTTGATATTTTTGCCCATAGAGAAATCCTAAGTGA
ATGAGCTCCAAATAATTTGGCCTAGCTATTTTCCAAAGTCGAGATACAGT
ACCGCAATTTAAAAAAGAAAACTTAAAATTGGTTCTTACACGGCTCTCAC
GCCCGGGGGGGGGGCAGTCAGGCAAATTGACCGACGGGTATGTGCGGTGG
TTAAGGGCATGTTTTTCAAAATATCAGAAATGCACTGTAAGGGTGGACTT
TTTTGATAAATGCACTGTATGGGTGGAAATTTCAGCAAATCTAGGAAAAA
TTGCAAATTTTGGCTCGAAAATCTTGATTTATTTTGCTCTAAAAGAGTTT
AAAATTTGAAAAAATGCACTGTAAGGGTATGAATTTTACCTATTTTTTCT
GCACTGTAAGGGTGCAATTCTAAAAGATTTTTTTTGCCGCACAGACCGTC
AGTTGGTAAACCTACTACCCCCCTCCCCCGGGCTCTCACGTTAAAGTTCT
ATCGTTTTCTTGTTAAAAAAAGTCAAAAACTTGTAGATTAAATATCTCGA
CTATGGGAAAATAGCTAGACAAAATGAATCAGAGGTTTTGCTCAGGGCCA
TGAAAGACCTCACCAAGCAGAAAATCTCAAACAATCTGATTATCCCTTCA
ATTCCTTTTTATTATTAAATCAATGAAAAAGCTATCTGATATATTTCCTC
TTTTTTAGTACGGTGTTTAAAGAAAAATTGTTATTATCACTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_031043XLOC_031043Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00048845-exon-scaffold_147-1575043694:151579..151777TCONS_00048845-exon-scaffold_147-1575043694:151579..151777Clytia hemisphaericaexon
TCONS_00048845-exon-scaffold_147-1575043694:150586..150783TCONS_00048845-exon-scaffold_147-1575043694:150586..150783Clytia hemisphaericaexon
TCONS_00048845-exon-scaffold_147-1575043694:140654..140854TCONS_00048845-exon-scaffold_147-1575043694:140654..140854Clytia hemisphaericaexon
TCONS_00048845-exon-scaffold_147-1575043694:140216..140413TCONS_00048845-exon-scaffold_147-1575043694:140216..140413Clytia hemisphaericaexon
TCONS_00048845-exon-scaffold_147-1575043694:139386..139419TCONS_00048845-exon-scaffold_147-1575043694:139386..139419Clytia hemisphaericaexon
TCONS_00048845-exon-scaffold_147-1510915933:151579..151777TCONS_00048845-exon-scaffold_147-1510915933:151579..151777Clytia hemisphaericaexon
TCONS_00048845-exon-scaffold_147-1510915933:150586..150783TCONS_00048845-exon-scaffold_147-1510915933:150586..150783Clytia hemisphaericaexon
TCONS_00048845-exon-scaffold_147-1510915933:140654..140854TCONS_00048845-exon-scaffold_147-1510915933:140654..140854Clytia hemisphaericaexon
TCONS_00048845-exon-scaffold_147-1510915933:140216..140413TCONS_00048845-exon-scaffold_147-1510915933:140216..140413Clytia hemisphaericaexon
TCONS_00048845-exon-scaffold_147-1510915933:139386..139419TCONS_00048845-exon-scaffold_147-1510915933:139386..139419Clytia hemisphaericaexon
TCONS_00048845-exon-scaffold_147-1491911889:151579..151777TCONS_00048845-exon-scaffold_147-1491911889:151579..151777Clytia hemisphaericaexon
TCONS_00048845-exon-scaffold_147-1491911889:150586..150783TCONS_00048845-exon-scaffold_147-1491911889:150586..150783Clytia hemisphaericaexon
TCONS_00048845-exon-scaffold_147-1491911889:140654..140854TCONS_00048845-exon-scaffold_147-1491911889:140654..140854Clytia hemisphaericaexon
TCONS_00048845-exon-scaffold_147-1491911889:140216..140413TCONS_00048845-exon-scaffold_147-1491911889:140216..140413Clytia hemisphaericaexon
TCONS_00048845-exon-scaffold_147-1491911889:139386..139419TCONS_00048845-exon-scaffold_147-1491911889:139386..139419Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_147supercontigscaffold_147:139386..151777 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.938187	0.331638	0.475483	0.0984957	0	0	0.227052	0.0245446	0.20597	0.137277	0.304284	0.360284	3.46998	5.0993	0.354006	1.06962	2.40961	2.36199	16.3865	13.9	6.32501	8.55418	2.45886	2.90777	3.55845	4.60291	0.499996	0	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00048845 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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