TCONS_00049301 (transcript) - C. hemisphaerica

Overview
NameTCONS_00049301
Unique NameTCONS_00049301
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2427

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00049301 ID=TCONS_00049301|Name=TCONS_00049301|organism=Clytia hemisphaerica|type=transcript|length=2427bp
gttgaaattttcaagaaaaataatttggctgttttttttgacaatttatt
ttttctttttaaagtaaGCATATGAAGTAAGAGAAATAAGGTGATAGCAA
AGCATATTTGGCCGACGAAAATGGTTATGGTTTACATGTAATTTTTCGat
agaaagttttaaaatacagcattttcaaatttgcggtagaaatttttttg
acacattttttggAGGATTTTATTGTCATTCGAGAAAAAAGGAATCATAC
AAAAATTTCTAGAAATTTCTTGGACTTTGAGAAGATTTATCACAAGTATT
TCTTAAAAGAATGATTAACAGAAATGGACATCTCTTGTCAATATCAGAGA
ACAATGATCACAGGATGGGTTTACGTATGCAACTGACCGCCTTCTTAAAC
GCCACTCTCGGTATAATACTACTCATCATCGCCCTGTGTACAGATCATTG
GTGTGGGCGGGAATCTGATATGTTGACCATTTATGAAGGACTGTGGACAA
AATGTACTGACCACCATCACGAGGGCGGCCGCCCGAAATTTTGTACCAAA
TTGGAAGGGACTTTCGGACACGATCAATataaCTATTATCCAGTtcttgt
gtttttatttttggcatGCTTCGTACATCTTATTTCATTCGTAATGTCCA
TCGTACTACTATGTCAACGACAAAACATGAAGTTAGAGAAAGCTCTTGCT
ATCGTACAGTTTATCGTTCTACTTTTGACGGTTGTTGGACTCGTATTTTA
CGTCATAACTTATGATGACAATTATTACGGCCTGAAGTGGAGTTGCGCCC
TAGGGTGGGGATCAACTCTGTGTTTCTTGGCCGCCCTTGTATTTTTACTG
ATTGATATCGACCGACAGAACAAGACAGCGGATAACAACTAGCAGaacaa
taaattttcaatgGGTTATTGGAGAGGCTCTAAATGAATAATGGTCAAAG
AGTAAACTCTAAAAACACAGACAGAATtatgaaaattatctgaaagCAAT
ACAACTGCGGTCCGGTTGTTATGAGTGTTACCTCGGAGGAATTTCTTTTG
AAGAGTATTGACCTAAGAATGCCGTCATTTATACATGTGATTATTGCGTC
TATCATGACACTtaaagtaccttatcggccaaaactaagtctaaattttg
acttgttgactaaaattagggccgactaaaatttgggctgactaaaattt
gggccgactaaaaattttggccaaattaaaagtttataattaagctttcc
ttaaccAACTTTTTTGAATACCATATCATTTTACGTCCACTACAATTCAA
TATTTCGTCCGCTATTATTCATTAtatattagtcggcccttagtgactaa
attttgacgaggtgactaaaattagggccgactaataattaaggctggtt
aagttttggccgataacgTAATACATTTAGGacattgatttttgaaatat
aggTTATTTCGTGAATCATAGCCTCTAGAAGATATTGAACGATGTTAAAC
CTACATTTTTGTGACCTATTTATTGACGgcttcttaagggctctgaccat
agtgaatttttcataatcNttaagggattcgattaaaaagcaatttataa
aggcaattctttgttaaaagtgttaaggaacctgaaatacaacttttttg
ttaaaataccACAATTTtcggactatggtcagagcccttaagaactATAA
AATTTGTTGATCAAAaactaaaatcgaaatatgaaaagtgactacacaat
atattgacgaacaatatttgacaatatcgttttcggaccgtaatgtacga
agtaaatagCAGGTActttattataaaaagaaaatttctttctgtaaaca
attcccctatattgttggaatattgcaaatggagctgacaatatattgcg
gacaacttttcaatatattgtctgacaatatattgtgtagtgtatgtagc
tcTTAACTTCCAGGTGTTCTTGAAACTTTGACGGTCAGTTNatttgatga
agaagaaaaggaagacttttgcgaggaagagtatttcaactttgaagagc
ttagtttcggcgaagaaaaaacattttgaaaaatttttcacagtagatgg
tgtatcttttaccgaacaataaaaatttttgcggaaaatttttgcNAggt
gtaaacaatccccctatattgcctggcaatatattgtgtagtgtatgtag
tccTTAAGGTCCAGGTGTTCtaatgaaatcaaaatattttgcagttttta
atgaaatcaaaatatcCTTTTATTACCTCTATTTGCTTGTTAAATATTTa
atacattttatttttctttcaaatttgtgcattttcatcttatttttttt
tccgaattattttgtacaaaagtagaaaataaatcaatttaTACATGAAA
ATTATACATAAAAAATCTATAACTGAA
Run BLAST on NCBI

transcript from alignment at scaffold_154:641485..654116-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00049301 ID=TCONS_00049301|Name=TCONS_00049301|organism=Clytia hemisphaerica|type=transcript|length=12632bp|location=Sequence derived from alignment at scaffold_154:641485..654116- (Clytia hemisphaerica)
GTTGAAATTTTCAAGAAAAATAATTTGGCTGTTTTTTTTGACAATTTATT
TTTTCTTTTTAAAGTAAGCATATGAAGTAAGAGAAATAAGGTGATAGCAA
AGCATATTTGGCCGACGAAAATGGTTATGGTTTACATGTAATTTTTCGAT
AGAAAGTTTTAAAATACAGCATTTTCAAATTTGCGGTAGAAATTTTTTTG
ACACATTTTTTGGAGGATTTTATTGTCATTCGAGAAAAAAGGAATCATAC
AAAAATTTCTAGAAATTTCTTGGACTTTGAGAAGATTTATCACAAGTATT
TCTTAAAAGAATGATTAACAGAAATGGACATCTCTTGTCAATATCAGAGA
ACAATGGTAAGCCCTTTTTGACAGACCCTGGTACAGCCTGGTGTAGCATT
GTGTTTAAAGACGAAGGCTAGAGAGGAATTTTCAACATTTCTTAAGCAAG
AACAAGCGAACAAGCCTTATAATTTGCACCAATCCTGGAATAACGGATTG
AACCTAGCACTTGCTTTGTTTCACACGGTACATTTTAGTTTCGATCCGGC
GTTTGTGAAAACCACGTAGGTCACACGTTTTGATAGGAAATAAGTGGCTT
GTTCCCACACCCCTGTGTCACGGACCCGGTGGGACCCCTACCCAATGGAA
AATTTGGCTAAAATTTCGTCCCCGGCGAGAAAAATACCCTACAATTTCAG
CTCCTGACTTTGTTTTTATTCCTATTTGGAATTCTATGGAAAAAAATGCA
CTCCAAAACCATCCCCACTGGATTTTTTGAGCCAGGAAAAATAGAACTTC
TAGTCGCAATAAAGATTAGCATAGAAGTTTCCATCAACACGAAGAAGTTC
CACCTGGGCTGTTAGACAGGCGTGTATTCTCAAGATTACGGAAACACCCA
AAAACACCGTTTCTTGCGTTTATTGAGGGAAAACAAAGCCAATAAAGACC
AATAAGTTGCCGAAGGACTTTTTAGATTTTGATATAAGAGTATGAGGAGA
TATGCAAGACATTGTATCTGCGGTAGTAAGGTTGCTCACATAAATAGAAA
AACGCAAGAGCAATCGCTATCCCAAGCTTATGCCACCGATCCACGCTTTT
TCGAGTAATGTTACCGTTCCGACAAGGCTCTCTTGTGTCGCGAGCACAGG
GTCAACGTTTTCTGGTAGGCGCTATGATTTCCTTTTCCTAGAAAAAGTAA
CTATCCAAGGATAAGGGCCATGTCTTCCTCATCGATGGGATCATACTTCT
ATTAATAGAGAAAACAATTGGTCTATAGGCTGTAAGGAGAAATTGCTGAC
ACTCCCTTAGAATAAATCACAAAAATTATTTTAAATGTTAAACAGACTTT
TGAAAGAAGCGAGTAAAAAGTAGAAGATCAAATAAAAGGAAAACCCTATC
AAGCAGTGCGTTAAAATAAAGCATTCCTTTAGTCTCACTGGGACTTTAAA
TTGGCGCGAGTCTATTCATGGGAAAACGAGTTAAAACTGTTACAACTCGA
TAAAAACCTGCTGAGTTTAAGATCTTTAAAAGTCTTTTATATTTACAAAT
TGTTAAGGATGCAAAATGTTTGACAGGCATTAAGAATTCAATCTATTTTT
ATGATTTCCTTTAGTTTTAAATTCGTTTATGGTCGTTATAAAAAGATTCA
TAAAATGTTTCGGAGTCCACTTAAGGCTTTAATTTTGAGCTTTGTAAGAC
AAACTCAGAATCAGCGCCATCAAAAATTATCAAGTAAAGTAAAGTTCAGT
CAGAAGTCTTCTGAAGTACAGCATATGCCATTTTGTATTTTTAAATTATT
AAAGCTCGATGAGAAATGTAACTGAAATACCTCAAATTTGGTACATAATC
ATCACGCACGCAAAGAGATTTTGAGGTCACGCGCTCAGGACCGAGAAATT
TACAGGACTTCTACGGGCCAAGAATCTATAACGATTTTATTATGACTTTA
AGCTCGGAGATGAGACTCGTCTTTAACCTTATTAAGATCCTTAGTGAAGT
TCTACCCTGCTTTTAAAACATTTAAAAATCAAATAGCACTGACTAGTATC
AAAATGGAAATCGTAAATGGTTCTTAAATAAATTGTACTTGTGTAGACTA
GATTAATTAAGTGTGCTTGTTTTAGTAGGCTTCTGCTCATATCCTATGAC
GAGAACGTTTCTTATAGGAAGTTTTTCTAAAGAGGTCTTCGATACAGACT
CGTAGACTAGTCAATAGTCTAATTTACAGAAGTTTTACGGAATAGTGGAC
ACAAGGGTTAATCCTATTACTGACTTTGGTAGGACGTTAAGAAAGAAAAA
AGTTGACAAACTAACCAGTCGATACAGACATCCTATCAAAATGTTCATTT
TAACCAGTAAAAAAAACGTGAGAAGGAGTGTTTTTATATGGGAAGATAAA
CAAATAAGGGTGGTTAAGTCAGTGTTTTTTACACTTTTGGCAAAAACGTG
AAAATTTGGGCACTTTTTTAAAACCAAATTTTAGAGAGCAAGTTTTCGTT
CATTATCAAATTTAGTGGTTCTATTGGAGAGAGAAAAGATGAAAGATTCC
ATTCCTTTTTAAAAGAACTATATAGCGTTANNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAACCCCTTATCATG
GTACTCTTTTTTTATTAGTTTGGTAGAAAAGGTCTCATTTCAGAAGTATC
TTTTTGTAAAGAATAATTTTACACCACCTGATAGTAAAAGGCCTGCTTTA
TCCGTAGGGTAAGATATAAATTCATTTGGAGCTCTCTAGAATGACATATT
CCAAATTTACCAAAAATCATGCATGTCACGGATGGAATGATTCATCCTAA
ATGACTTGCTACATTCGAATGTTTTCATCAAATCCTTTCGAAGAGAAGTT
TAGATAATCACTTGATAAAGCGTTACTTGTGATAGAGAGCCTTCTAAGAT
TGATATATTCCTAACTAGTTCTTGTGTTAAAAAAATACGAAATAAATTAA
GANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAAATAAA
TTACCCAGAAGCATCTTTACGTTCATGTCAAGTTATAATCCATAATCTGA
GCTTCTCGTTCAAAAGTGCTCCTTTTTACAGACTTGTTTCATATTATGCC
CATATTATGACAAAGAAACTTTTCATCGAAAGTATTGTAGTTTAGAGCGT
GCAAAGTTTATTTATTCCACGAAACTTTTGAAAAATGCCAGAAAATATAT
ATATTTTTGTTGGAATTCGAAATTGCTTGGGTGACTGGTAGACTTCGACT
TCTTTGCATTATTAGAACTAGGTAACCCTTTAAAAACGGAATATTTCATC
CTTCTGAACTCTAGAAATATCTTACTTCTACAATTAATCGAATTCTTGAT
ACTTATTATGTTTCTAAGCTTTTCAAACNAGATTCTTAAAATGATTTGGA
CTAGTCTTTGTTCCCTAAAGTTCAATCTCGGGGTCCATTTAAGGCTCCAA
TTCTGAGCGTTGTAAGACAAACTCAGAATCAGCGTCATCAAAAATCATTA
AACGTAAAGTTCAGTCAGCAGTCTCTTAAAGTGCAACATAGACATTTTGA
TATCTCTAAATTATTAAAACTCGATGAGAAATTTAACTGAAATACCTAAA
ATTTTGTATATAATCATCACGCAAAGAGATTTTGAGGTCACGCGCTCAGG
GCCGAGAAATTTACAGGACTTCTACGGGCCAAGAATCTATAACGATTTTA
TTATGACTTTAAGCTCGGAGATGAGACTCGTCTTTAACCTTAACCTTAAC
TTTAACCTAGTATCAAAATGGAAATCGTAAATGGTTCTTAAATAAATTGT
ACTTGTGTAGACTAGATTAATTAAGTGTGCTAGTTTTAATAAGCTTCTGC
TCATATCCTATGACGAGAACGTTTCTTATAGGAAGTTTTTCTAAAGAGGT
CTTCGACACAGACTCGTAGACTAGTCACTAGTCTAATTTACAGAAGTTTT
ACGGAATAGTGGACACAAGGGTTAATCCTATTACTGACTTTGGTAGGACG
CTAAGAAAGAAAAAAGTTGACAAACTAACCAGTCGATACAGACATCCTCT
CAAAATGTTCATTTTAACCAGAAAAAAACGTGAGAAGGAGTGTTTTTATA
TGGGAAGATAAACAAATAAGGGTGGTTAAAGCACTCCGTCACAGTGCAAA
TGTCACTGTTTAATTATGACGTAATTCACGCCGAGAGGAATATCAAGCTA
ATATATATAGTGATGGGTATAATTTAAAAAAGAAAATAGTTCGCATAATA
ACGTTAAAATTTCTGAAATTACTTTCCTCTCAGTTAGCTCTACGATTATG
TTGAATGGAATAAAAATCTATTTTATAATTGGGAGTTCAACATTGAGGCA
AGTGCATGGTAGTTTCGTTGCATTTAGTGGATTAATTGAATTAGAATAAT
TTGTTGATGGGAATCTCAATGTGGAATTTAAGTTATATGGAAAATTGGTT
TATAACAATATCGAAATACGGTTTCTCGAGAAAGTATAAAATTTTCTTGG
TAAATTTGACGGTGGAATTTCCCGGGCGATTTCACATCAAAATTAAATTA
CATTTGCTTTAAAATCTAAGACTTGAGGTTTTAGTATTTTCTAATCATTA
CGGGCAAATTACATTGCTTAAAAATAAGTTTTTAGTTTGGCCCTGAGGAT
AGCGAATTGTGCGGAATCAAGACAAATTACATCATAATTCCGCTTTCTAA
TTATTCTATTCGCCGGTGCAGGTACAGAGTCATTGTGATCGATACATTTT
GAAATTGCCTTAAAACAATTCGCCTGAGTTGATTTTGTCATTGGCGTCGT
AGCGTAAAGACAATGTAAAGCCCTTGTAATGCTCAAACCGACTTAGTCTA
TGTGCCCTGGCATCCCTGGTGAGCTCCAAATCATGTTAAAAAAATAATTC
GAAAAAACCAAGGAATCTATCAATAGAGGAGTATTTTAAAAATAATATTG
TTGGATGGCCAATAACTAAGGAATTTCTTTTCAAAGGAAAATCTTTTTCG
GGAAGGAAATCGTATCCGTCAAATTTATCAAAAATGGTTTAAAAAGTACT
CTATTTAATAAACAGTGACAAGATTTATTTGAAAATATACACCGGAAGAA
TATGTTTTAAATGAAATATTTTGGAAATAATTTTGCTGGGAAATTTAAAC
GAATCACTCTTCGAAGAAGAAAAAAAAGCCTCAAAAAAAGACGTCGAGGA
TGAACATTTTTGCGCTTTTCTGAAAGAAAATTTATTTGATGATGGTAAAA
AGTATCGGCAAGAGAAAAATGGTGTAGAAATTGTGATTGTCTTTGAGTAT
CGATAAAGCGTTTTTGGGAAATTTATTTTGACTAGACATCAGCAGAGTAG
AAATCTGAGGCTCTATTGCAATCATGATGTATAATCTGTATAATTTAAAT
GAAGATGACACTTTCAATAACAACTTGAACGAAATGTATGTCACCTCCTT
AAAACGTACAAAACTGGAGCGAAAATCTTCAGTAGTAGGTAAGCCAATCA
TGAGCCACGATTTAGCAACCAAGGTAACACCCCTGTCTCACAGTCCTGAG
TGGGGATAAAAATTCCTATTCAAATCCCAATGGGGATAGAAATTCTATAG
TTTCAAGGTTTTGGCGCACAATTTTTAAACATTGAATTTCAAATGGGGTG
CCAGTGTGTGTCCGTGACACAGGGGTGTAAGGTAGTTAGACGAAATTGGT
CAGAATCCGCATTTTTCTCTGGACTTCTGAAATGTTACTTGAAATGTTAC
TTTTGAATAACTTCGTAACCCAGCTGGCACACAACGTTGTTTCAACGTTC
ATTTAACGTTATATGGACGTTGTGAACGTTATTATTAACGTTGAAACAAC
GTTGTGTGCTAGCTGGGAAGTTAAAAAGAGCATTTGAGTTCAGTAAAAAG
ATTTAACAAGTAGGGTCTTGTATATTTTATCAAAATCTAACCAACTATTT
TTAACACAATAGACAGTAGGAGACAATAGGAGACAGGGTTAAACGTTGAA
GAGACGAATCTCAGACCACTTTGGAATTCTAAAATATACATTCATCTCAA
TTGATTTATTATAGGGGTTGGTCCTTGGGTTATAGAGCTGTCTACTTAAG
GTCTAAGACCCCTATTGTTCCTTTTAAAAAACAAGTTTGAAAAAGACTCC
TTATTTAATTTATTTATAAGAACAGTTTTGTCAAATCAAAAATTTCTTAT
TATTTTTAAAAACTCGTATCAAAGTGATCTAGCTTAACAACCAGTTTCTA
TTGGTTACTATGGTCAATCCTTACCTGGCAATTGTTAAAAAATCTTCCTA
TCATCACCACACACCCCTGTCTCACAACCCGGTGAGAATTTTTCCCACAT
TCATTGCAGGGTGAAAATTTCTATCGAAATCTCGACGAGAACAGGAATTA
TATTGTTCTTAAGTGGAAAAATATCCCAAGTCGAGAAATACCCAGTGGGA
TGGTTTTGGAGTGCAATTTTTTCCCATAAATTTTGAATGGGGACTAACGA
TCAAACTCGATTTTCCAGCTGGGCTGAAATTGTAGGGTAACTTTTTCCCA
CCAGGATGAAATTTTGGACAAATAAAGATTTTGTAAGTTAAGAATATTCT
TATAAAGTTTTTCTTTTATTTTTGTATTCAAAATTTTTGAGGTTTTGTAT
TCAAATATCCTATAAAAAGTCATCTTTGTTTGAAGAAGGATTTTAAGACC
GGATTAACTCTAAAAAAAATCCATCTATTTTATAATATTTTCCCAAAACT
TTTCTTCAATTAAAATAAATTCGACTCAAAGGGGAGAGATTCAGAGTGCT
AAACTCAATCATGGTTAGCGCGACTTTTGATAAATTATCTCTTCTCTTTT
TCACTTTAAATTTTTTCATCGCTTTTTAAAAAAAGGTGACGAGTGACTAA
TCTTATTTATAAGAAATTATTGAAGACCTTGAAAACCTTTTCTATAATAA
TAATTATATTGACTAACAATATTTGACAATATAGTTTTCAGACCGTAACA
TACGGAATAAACAACAGGTACTCTATTATAAAAATTTTACTTTCTGAGAA
TCATGTGATACAGTACTTGTTTTAAAAAAATCTATTAAACATCGCATACC
AATCTTTACAGAATTATATCAAGATCTCAAAAAATACAATTAAAGCAAGA
TACAGTATGACTTCGAATAAACGCCCCCTCAAATATAAACGTCCTTTCTA
AAATGCCCCCCAAAAACGCCCGGGCGTTTATTAGAAGTAATACGGTGACC
CCTACTAGAAATGTGTTGAGCTAAAATTGACCAGAAGTNAATACGGTAAA
TGTATGTTGACTCCTTACTAGAAATGTGTTGAGCTAAAATTGATTAGAAA
GCTGCTTATAAAAAAGATCATATTTTCAGAACTGAAGCTGACTAGTCACA
CAATTAAAGGATAGAAGGGAAAAACTCTTCTCTTGAACAACAAAATAAAT
AAAAAAACACAAAAAGGATTACAGAAGATTCGAAAACTCATTGCATTATT
TATCATGCTTTAAATGATAATCTTTTAGTACCTGACCACACAATAAAAAG
TTCCTTCTAAAAAAATAAAGGTGCGACGAAAAGCAAAAAAGGGAAAAATG
GATGGAAAACTTTTTCCATTTTCAGTTTTTTTTAATACTGTATATATAAA
CATTGGGACAGACGCACTACTGCTGCGCCAGACAAAAACTTTAAGACTGT
TTCCTTATTTTTCGATGGAATACTTTTTGTTACATTTCTAGAAAGGAGCC
ATAGAGTGAAATCAAGATTTTCTTCCTGTACAAGTATCACTTGGTCGCGT
CGCAAACTATTACGTTTTGTTTGTTTTGTGATACCATTTCATTACACAGT
AAATTGTAAACACACTAAATGAAAGAGTTGTGCTGATTAACATTTTGTAT
TTAAAAAGAAGAACGATTTATATCTTGTAATTATCAATTCATTGAAATTC
TACAAAACGAAAAAAAAGAGTAATAAAGAATAATTAAGGCGTCGGCAAAA
TCATTTTGGGTTTTCGAAGAATATTATAACAAAAAAGGAAAGAGATTTTT
CACTTTTTCGGGGAAGCAAGTGAGCCATGGTGTTAGTCAAAGAAATTGTC
AAAATTATAAAGAAAAGTAAACCGTCACTTTTGAACGAAGAAGGAGAATC
GAGATCGGGTAAGTTAGTATAATATAGAATAAGTCCGGTATACACACAAA
ATATCTTATATAAATAAAACACTAGAGAGAGCTCAGTCACTGGCTGAGGC
AAAACAACGCGCTGTCTTTGCTAAGTAGATCTCAACTACCGTGGTTCTAT
CTAGTATTTCTAGATGTCTGTGGATACACATAGCGATATTCGTACGTTTA
TATGACGCTATATGGATGTATGGACCTTAGATGGATGTTCTTTGATATTT
TGTGTAGAACCAGTCCAAGTATCTGGTATTACGATTGCAGATTGGAGGCC
ACCCACACTTAAGCTCTAATGGAAAGAGTCAATTTCCCAAGCGGAGAGGA
CTTATATGTCGCATTTGGATTCCGGTTCGAGTTTCCTTATGCGTACCTCC
CCTATGTTAAAAACTTTTCCGACCTTTAGTACCGCTTAACAAAGACTCAA
TAATATCAAATCTGTTAACTTGTTAAAGATTAAAGCTTCAATTCTACTTA
CTTTACTCAATCTACTTGGAATTCTAGCAAAAATAACACAGACTTGAAAA
ATCATCAAAATTTTACTTTTACTTAAGCCAAATGCTATTATTAAGAGGTG
TTTGTGATTAAAATGGCTGAAGAAATATGAATGAGCGTCATGGTACTATG
TGTCCTTCAGAAATAATGAAAAATAACACTAGAACCTTTTTTTTCTTCAT
AATTTTAGAAATAAAAAAAGGATGAAAAAGTTCTATCTGCTAATTAAATA
CTTCATAAAATCATATTAGATCAATGTAAAAGAATTTAAGTTGATGTTTT
CGTAGTTTTTGGATTCAATCTTTTGACTTTTATCTTTTCAGTCATTTTTT
CTCAAATTGAAATTAATAAAATCAAAGAAAATGTTAAAGGGTTGAACAGG
AGAACCCGTCCTCCCTCTAAGAAATGCAGACTCAGATTTACGTAGCATCG
TTACCATTTTGGTATCTAATCATCTATTTTTTCAAATTCATACTTCTAGA
TCACAGGATGGGTTTACGTATGCAACTGACCGCCTTCTTAAACGCCACTC
TCGGTATAATACTACTCATCATCGCCCTGTGTACAGATCATTGGTGTGGG
CGGGAATCTGATATGTTGACCATTTATGAAGGACTGTGGACAAAATGTAC
TGACCACCATCACGAGGGCGGCCGCCCGAAATTTTGTACCAAATTGGAAG
GGACTTTCGGACACGATCAATGTAAGTTCTATTGAAAACTTTTAGTTATT
TCTACACCACAACAACATGCTTTTTTTATAAGAATCTACTCTATAAGAAT
GATCACGATGAAATCGGCCAAAAATTTAGGTATAAGCTAAGAATACCAAC
ATCATGGAATTTGGAAAATGAACCTAAGAATGCCACTCTTAAAACTTCCA
TATGAATTGCCAATTTTCTCCAGCAATGCAAAAAGCTTTCACAAAAATGC
CTTTTAATATTTAGCTTGAGATGTGTATATTGCATGCTAAATTTAGACTG
AGTTTGGGTCCTAGCCTAAGAATACGTCATAAGAATATTTTAGGATGTTT
TTCAAAAAGCTAAGAATATCCATGATGAAATGGAAAAACCATTCTTGTGA
AAAAAAGCGTGTAATTAAAAAAGTTGCACAAAAATGACCACTGAAAAACA
ATATTTTGAGCCTCATTTCCATCCAAACTTAGGACATAAGAACAAATTAA
GAACAATCTGAGGCACAACATTGACAAAATGTCACTTTAAATTCAAAAAA
TCCTAAATCTGCTATTTAAAAAACAATGACTTCCTTGATATTGGATAGGC
TAGGGAGTAATATTTTTCGGATGAACTCCAGTTGTAATTTTTGTGTATTC
TTTTCTATTTTTAGATAACTATTATCCAGTTCTTGTGTTTTTATTTTTGG
CATGCTTCGTACATCTTATTTCATTCGTAATGTCCATCGTACTACTATGT
CAACGACAAAACATGAAGTTAGAGAAAGCTCTTGCTATCGTACAGTTTAT
CGTTCGTAAGTAACTTTATTCAACCCATATAACCTGGGTTTTTTGAGGAA
TAATAATCGGGGGAGGCCCTGAAAAGTCCTGAAATTTTGTATGGAATGCA
TTCTTAAAGCTCTTGATAAAAATGATTTGAACTTTGAAGCTGACGTCTTT
CAAATTTTTAAATTTCTATTTCAGTACTTTTGACGGTTGTTGGACTCGTA
TTTTACGTCATAACTTATGATGACAATTATTACGGCCTGAAGTGGAGTTG
CGCCCTAGGGTGGGGATCAACTCTGTGTTTCTTGGCCGCCCTTGTATTTT
TACTGATTGATATCGACCGACAGAACAAGACAGCGGATAACAACTAGCAG
AACAATAAATTTTCAATGGGTTATTGGAGAGGCTCTAAATGAATAATGGT
CAAAGAGTAAACTCTAAAAACACAGACAGAATTATGAAAATTATCTGAAA
GCAATACAACTGCGGTCCGGTTGTTATGAGTGTTACCTCGGAGGAATTTC
TTTTGAAGAGTATTGACCTAAGAATGCCGTCATTTATACATGTGATTATT
GCGTCTATCATGACACTTAAAGTACCTTATCGGCCAAAACTAAGTCTAAA
TTTTGACTTGTTGACTAAAATTAGGGCCGACTAAAATTTGGGCTGACTAA
AATTTGGGCCGACTAAAAATTTTGGCCAAATTAAAAGTTTATAATTAAGC
TTTCCTTAACCAACTTTTTTGAATACCATATCATTTTACGTCCACTACAA
TTCAATATTTCGTCCGCTATTATTCATTATATATTAGTCGGCCCTTAGTG
ACTAAATTTTGACGAGGTGACTAAAATTAGGGCCGACTAATAATTAAGGC
TGGTTAAGTTTTGGCCGATAACGTAATACATTTAGGACATTGATTTTTGA
AATATAGGTTATTTCGTGAATCATAGCCTCTAGAAGATATTGAACGATGT
TAAACCTACATTTTTGTGACCTATTTATTGACGGCTTCTTAAGGGCTCTG
ACCATAGTGAATTTTTCATAATCNTTAAGGGATTCGATTAAAAAGCAATT
TATAAAGGCAATTCTTTGTTAAAAGTGTTAAGGAACCTGAAATACAACTT
TTTTGTTAAAATACCACAATTTTCGGACTATGGTCAGAGCCCTTAAGAAC
TATAAAATTTGTTGATCAAAAACTAAAATCGAAATATGAAAAGTGACTAC
ACAATATATTGACGAACAATATTTGACAATATCGTTTTCGGACCGTAATG
TACGAAGTAAATAGCAGGTACTTTATTATAAAAAGAAAATTTCTTTCTGT
AAACAATTCCCCTATATTGTTGGAATATTGCAAATGGAGCTGACAATATA
TTGCGGACAACTTTTCAATATATTGTCTGACAATATATTGTGTAGTGTAT
GTAGCTCTTAACTTCCAGGTGTTCTTGAAACTTTGACGGTCAGTTNATTT
GATGAAGAAGAAAAGGAAGACTTTTGCGAGGAAGAGTATTTCAACTTTGA
AGAGCTTAGTTTCGGCGAAGAAAAAACATTTTGAAAAATTTTTCACAGTA
GATGGTGTATCTTTTACCGAACAATAAAAATTTTTGCGGAAAATTTTTGC
NAGGTGTAAACAATCCCCCTATATTGCCTGGCAATATATTGTGTAGTGTA
TGTAGTCCTTAAGGTCCAGGTGTTCTAATGAAATCAAAATATTTTGCAGT
TTTTAATGAAATCAAAATATCCTTTTATTACCTCTATTTGCTTGTTAAAT
ATTTAATACATTTTATTTTTCTTTCAAATTTGTGCATTTTCATCTTATTT
TTTTTTCCGAATTATTTTGTACAAAAGTAGAAAATAAATCAATTTATACA
TGAAAATTATACATAAAAAATCTATAACTGAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_031281XLOC_031281Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00049301-exon-scaffold_154-1575043694:653761..654116TCONS_00049301-exon-scaffold_154-1575043694:653761..654116Clytia hemisphaericaexon
TCONS_00049301-exon-scaffold_154-1575043694:644146..644367TCONS_00049301-exon-scaffold_154-1575043694:644146..644367Clytia hemisphaericaexon
TCONS_00049301-exon-scaffold_154-1575043694:643362..643502TCONS_00049301-exon-scaffold_154-1575043694:643362..643502Clytia hemisphaericaexon
TCONS_00049301-exon-scaffold_154-1575043694:641485..643192TCONS_00049301-exon-scaffold_154-1575043694:641485..643192Clytia hemisphaericaexon
TCONS_00049301-exon-scaffold_154-1510915933:653761..654116TCONS_00049301-exon-scaffold_154-1510915933:653761..654116Clytia hemisphaericaexon
TCONS_00049301-exon-scaffold_154-1510915933:644146..644367TCONS_00049301-exon-scaffold_154-1510915933:644146..644367Clytia hemisphaericaexon
TCONS_00049301-exon-scaffold_154-1510915933:643362..643502TCONS_00049301-exon-scaffold_154-1510915933:643362..643502Clytia hemisphaericaexon
TCONS_00049301-exon-scaffold_154-1510915933:641485..643192TCONS_00049301-exon-scaffold_154-1510915933:641485..643192Clytia hemisphaericaexon
TCONS_00049301-exon-scaffold_154-1491911889:653761..654116TCONS_00049301-exon-scaffold_154-1491911889:653761..654116Clytia hemisphaericaexon
TCONS_00049301-exon-scaffold_154-1491911889:644146..644367TCONS_00049301-exon-scaffold_154-1491911889:644146..644367Clytia hemisphaericaexon
TCONS_00049301-exon-scaffold_154-1491911889:643362..643502TCONS_00049301-exon-scaffold_154-1491911889:643362..643502Clytia hemisphaericaexon
TCONS_00049301-exon-scaffold_154-1491911889:641485..643192TCONS_00049301-exon-scaffold_154-1491911889:641485..643192Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_154supercontigscaffold_154:641485..654116 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0.160606	0	0	0	0	0	0	0	0	0	0	0	0	4.90291	3.20945	0	0	11.6501	12.0522	3.11831	2.57432	1.57004	3.68625	0	0	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00049301 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top