Overview
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00049314 ID=TCONS_00049314|Name=TCONS_00049314|organism=Clytia hemisphaerica|type=transcript|length=2354bpRun BLAST on NCBI transcript from alignment at scaffold_154:827514..830026- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below.>TCONS_00049314 ID=TCONS_00049314|Name=TCONS_00049314|organism=Clytia hemisphaerica|type=transcript|length=2513bp|location=Sequence derived from alignment at scaffold_154:827514..830026- (Clytia hemisphaerica) Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Position
The following features are aligned
Expression
Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Values :
GrOo_1 GrOo_2 FGOo_1 FGOo_2 EG_1 EG_2 P1_1 P1_2 P2_1 P2_2 P3_1 P3_2 PoPr_1 PoPr_2 St_1 St_2 GO_1 GO_2 PH_1 PH_2 BMF_1 BMF_2 MMF_1 MMF_2 M_1 M_2 GEC_1 GEC_2 GEN_1 GEN_2 Blast
BLAST of TCONS_00049314 vs. Swiss-Prot (Human)
Match: ZN814 (Putative uncharacterized zinc finger protein 814 OS=Homo sapiens GN=ZNF814 PE=1 SV=2) HSP 1 Score: 225.713 bits (574), Expect = 3.096e-62 Identity = 146/356 (41.01%), Postives = 197/356 (55.34%), Query Frame = 1 Query: 535 KCKECGALFTTQNALDIHQNNGIK---YQCGTCRKMFSCKITVQEKLQTSPQKKVKPLKISR-NRAKLKVAS---TQRLPELNAENQCKDCGKSFSSESTLKRHLKAHS--KIMICDRCGKGFSTEDFLVHNKSSRCSKKETVFKCKECKKIFSQKGTLNMHMNTHT--KPFSCNECGKAFSLKRSLEQHQSSRKCA--LECIECQRSFSNKDDLKKHIRSHNS---FECKECGKSFTTKTLLWKHEQIHIEIKAYHCDTCGKSFSTPGYLRSHQKVH--EHPMFNCEECGKSFPFKRSLERHLNTHKGIKPFKCNVCGKCFSQKNNLVTHMKCHAEERPFQCQKCGKGFKMKHNL 1548 +C ECG F+ + HQ + Y+CG C K FS ++ + K+ P + ++ K AS QR+ +C +CGKSFS +S+L +H + H+ K C+ CGK FS+E L R E FKC EC K FS K +L H H+ +P+ C ECGK+FS K +L HQ A EC EC +SFS+K L+ H + H +EC ECGKSF+ K L H+++H ++Y C CGKSFS+ G+LRSHQ+VH E P + C ECGKSF KRSL H H G +P+KC CGK F++K +L H + H ERPF+C +CGK F K NL Sbjct: 325 ECGECGKSFSKYASFSNHQRVHTEKKHYECGECGKSFSKYVSFSNHQRVHTGKR--PYECGECGKSFSKYASFSNHQRVHTDKKHYECGECGKSFSQKSSLIQHQRFHTGEKPYGCEECGKSFSSEGHL--RSHQRVHAGERPFKCGECVKSFSHKRSLVHHQRVHSGERPYQCGECGKSFSQKGNLVLHQRVHTGARPYECGECGKSFSSKGHLRNHQQIHTGDRLYECGECGKSFSHKGTLILHQRVHPRERSYGCGECGKSFSSIGHLRSHQRVHTGERP-YECGECGKSFSHKRSLVHHQRMHTGERPYKCGDCGKSFNEKGHLRNHQRVHTTERPFKCGECGKCFSHKGNL 675 HSP 2 Score: 204.912 bits (520), Expect = 2.406e-55 Identity = 131/335 (39.10%), Postives = 180/335 (53.73%), Query Frame = 1 Query: 589 QNNGIKYQCGTCRKMFSCK--ITVQEKLQTSPQKKVKPLKISRNRAKLKVASTQRLPELNAENQCKDCGKSFSSESTLKRHLKAHS-KIMICDRCGKGFSTEDFLVHNKSSRCSKKETVFKCKECKKIFSQKGTLNMHMNTHT--KPFSCNECGKAFSLKRSLEQHQS--SRKCALECIECQRSFSNKDDLKKHIRSHNS---FECKECGKSFTTKTLLWKHEQIHIEIKAYHCDTCGKSFSTPGYLRSHQKVH--EHPMFNCEECGKSFPFKRSLERHLNTHKGIKPFKCNVCGKCFSQKNNLVTHMKCHAEERPFQCQKCGKGFKMKHNLKEH 1557 Q G Y CG K FS K ++ ++L T + V + ++ +K S + +++C +CGKSFS + H + H+ K C CGK FS ++ + R + ++C EC K FS+ + + H HT K + C ECGK+FS S HQ + K EC EC +SFS H R H +EC ECGKSF+ K+ L +H++ H K Y C+ CGKSFS+ G+LRSHQ+VH E P F C EC KSF KRSL H H G +P++C CGK FSQK NLV H + H RP++C +CGK F K +L+ H Sbjct: 208 QCGGAHYSCGESMKHFSTKHILSQHQRLLTREECYV-CCECGKSFSKYASLSNHQRVHTEKKHECGECGKSFSKYVSFSNHQRVHTEKKHECGECGKSFS--KYVSFSNHQRVHTGKRPYECGECGKSFSKYASFSNHQRVHTEKKHYECGECGKSFSKYVSFSNHQRVHTGKRPYECGECGKSFSKYASFSNHQRVHTDKKHYECGECGKSFSQKSSLIQHQRFHTGEKPYGCEECGKSFSSEGHLRSHQRVHAGERP-FKCGECVKSFSHKRSLVHHQRVHSGERPYQCGECGKSFSQKGNLVLHQRVHTGARPYECGECGKSFSSKGHLRNH 538 HSP 3 Score: 193.741 bits (491), Expect = 1.294e-51 Identity = 133/397 (33.50%), Postives = 200/397 (50.38%), Query Frame = 1 Query: 484 ICGQYLNLLSKNPEQLCKCKECGALFTTQNALDIHQ--NNGIKYQCGTCRKMFSCKITVQEKLQTSPQKKVKPLKISRNRAK-LKVASTQRLPELNAENQCKDCGKSFSSESTLKRHLKAHS--KIMICDRCGKGFST--------------------------EDFLVHNKSSRCSKKETVFKCKECKKIFSQKGTLNMHMNTHT--KPFSCNECGKAFSLKRSLEQHQS--SRKCALECIECQRSFSNKDDLKKHIRSHNS---FECKECGKSFTTKTLLWKHEQIHIEIKAYHCDTCGKSFSTPGYLRSHQKVHEHP-MFNCEECGKSFPFKRSLERHLNTHKGIKPFKCNVCGKCFSQKNNLVTHMKCHAEERPFQCQKCGKGFKMKHNLKEH 1557 I Q+ LL++ E+ C ECG F+ +L HQ + K++CG C K FS ++ + +KK + + ++ +K + ++ QR+ +C +CGKSFS ++ H + H+ K C CGK FS + + R + ++C EC K FSQK +L H HT KP+ C ECGK+FS + L HQ + + +C EC +SFS+K L H R H+ ++C ECGKSF+ K L H+++H + Y C CGKSFS+ G+LR+HQ++H ++ C ECGKSF K +L H H + + C CGK FS +L +H + H ERP++C +CGK F K +L H Sbjct: 228 ILSQHQRLLTR--EECYVCCECGKSFSKYASLSNHQRVHTEKKHECGECGKSFSKYVSFSNHQRVHTEKKHECGECGKSFSKYVSFSNHQRVHTGKRPYECGECGKSFSKYASFSNHQRVHTEKKHYECGECGKSFSKYVSFSNHQRVHTGKRPYECGECGKSFSKYASFSNHQRVHTDKKHYECGECGKSFSQKSSLIQHQRFHTGEKPYGCEECGKSFSSEGHLRSHQRVHAGERPFKCGECVKSFSHKRSLVHHQRVHSGERPYQCGECGKSFSQKGNLVLHQRVHTGARPYECGECGKSFSSKGHLRNHQQIHTGDRLYECGECGKSFSHKGTLILHQRVHPRERSYGCGECGKSFSSIGHLRSHQRVHTGERPYECGECGKSFSHKRSLVHH 622 HSP 4 Score: 189.504 bits (480), Expect = 3.091e-50 Identity = 130/366 (35.52%), Postives = 190/366 (51.91%), Query Frame = 1 Query: 523 EQLCKCKECGALFTTQNALDIHQ--NNGIK-YQCGTCRKMFSCKITVQEKLQTSPQKKVKPL----KISRNRAKLKVASTQRLPELNAENQCKDCGKSFSSESTLKRHLKAHS--KIMICDRCGKGFSTEDFLVHNKSSRCSKKETVFKCKECKKIFSQKGTLNMHMNTHT--KPFSCNECGKAFSLKRSL--EQHQSSRKCALECIECQRSFSNKDDLKKHIRSHNS---FECKECGKSFTTKTLLWKHEQIHIEIKAYHCDTCGKSFSTPGYLRSHQKVH--EHPMFNCEECGKSFPFKRSLERHLNTHKGIKPFKCNVCGKCFSQKNNLVTHMKCHAEERPFQCQKCGKGFKMKHNLKEHNDN 1566 E+ +C ECG F+ + L +HQ + G + Y+CG C K FS K ++ Q ++ K ++ L + QR+ C +CGKSFSS L+ H + H+ + C CGK FS + LVH++ R E +KC +C K F++KG L H HT +PF C ECGK FS K +L QH + + C EC + F K L H R HN + C+ C K F K L H+++H + Y C+ CGKSF+ H+++H E P + C ECGKSF S +H H G KP++C+ CGK F++ ++L H + H E+P++C+KCGK F K +L H + Sbjct: 489 ERPYQCGECGKSFSQKGNLVLHQRVHTGARPYECGECGKSFSSKGHLRNHQQIHTGDRLYECGECGKSFSHKGTLILH--QRVHPRERSYGCGECGKSFSSIGHLRSHQRVHTGERPYECGECGKSFSHKRSLVHHQ--RMHTGERPYKCGDCGKSFNEKGHLRNHQRVHTTERPFKCGECGKCFSHKGNLILHQHGHTGERPYVCRECGKLFKKKSHLLVHQRIHNGEKPYACEACQKFFRNKYQLIAHQRVHTGERPYECNDCGKSFTHSSTFCVHKRIHTGEKP-YECSECGKSFAESSSFTKHKRVHTGEKPYECSECGKSFAESSSLTKHKRVHTGEKPYKCEKCGKLFNKKSHLLVHQSS 849 HSP 5 Score: 176.407 bits (446), Expect = 8.137e-46 Identity = 123/333 (36.94%), Postives = 177/333 (53.15%), Query Frame = 1 Query: 535 KCKECGALFTTQNALDIHQ--NNGIK-YQCGTCRKMFSCKITVQEKLQTSPQKKVKPL-KISRNRAKLK-VASTQRLPELNAENQCKDCGKSFSSESTLKRHLKAHS--KIMICDRCGKGFSTEDFLVHNKSSRCSKKETVFKCKECKKIFSQKGTLNMHMNTHT--KPFSCNECGKAFSLKRSLEQHQS--SRKCALECIECQRSFSNKDDLKKHIRSHNS---FECKECGKSFTTKTLLWKHEQIHIEIKAYHCDTCGKSFSTPGYLRSHQKVH--EHPMFNCEECGKSFPFKRSLERHLNTHKGIKPFKCNVCGKCFSQKNNLVTHMKCH 1485 +C ECG F+++ L HQ + G + Y+CG C K FS K T+ + P+++ + ++ + + + S QR+ +C +CGKSFS + +L H + H+ + C CGK F+ + L +++ R E FKC EC K FS KG L +H + HT +P+ C ECGK F K L HQ + + C CQ+ F NK L H R H +EC +CGKSFT + H++IH K Y C CGKSF+ H++VH E P + C ECGKSF SL +H H G KP+KC CGK F++K++L+ H H Sbjct: 521 ECGECGKSFSSKGHLRNHQQIHTGDRLYECGECGKSFSHKGTLILHQRVHPRERSYGCGECGKSFSSIGHLRSHQRVHTGERPYECGECGKSFSHKRSLVHHQRMHTGERPYKCGDCGKSFNEKGHLRNHQ--RVHTTERPFKCGECGKCFSHKGNLILHQHGHTGERPYVCRECGKLFKKKSHLLVHQRIHNGEKPYACEACQKFFRNKYQLIAHQRVHTGERPYECNDCGKSFTHSSTFCVHKRIHTGEKPYECSECGKSFAESSSFTKHKRVHTGEKP-YECSECGKSFAESSSLTKHKRVHTGEKPYKCEKCGKLFNKKSHLLVHQSSH 850 HSP 6 Score: 98.5969 bits (244), Expect = 5.276e-21 Identity = 88/282 (31.21%), Postives = 125/282 (44.33%), Query Frame = 1 Query: 775 CKDCGKSFSSESTLKRHLKAH--SKIMICDRCG-KGFSTEDFLVHN------KSSRCSKKETVFKCKECKKIFSQKGTLNMHMNTHTKPFSCNECGKAFSLKRSLEQHQSSR---------------KCA---LECIECQRSFSNKDDLKKHIRSHNSFECK---ECGKSFTTKTLLWKHEQIHIEIKAYHCDTCGKSFSTPGYLRSHQKVHEHPMFNCEECGKSFPFKRSLERHLNTHKGIKPFKCNVCGKCFSQKNNLVTHMKCHAEERPFQCQKCGKGF 1530 C+ CG + H H K+ C+ G K + + +F H K R S +E +F K CK +H++ + FS E GK F + L Q ++S +C C E + FS K L +H R EC ECGKSF+ L H+++H E K + C CGKSFS +HQ+VH C ECGKSF S H H G +P++C CGK FS+ + H + H E++ ++C +CGK F Sbjct: 94 CEMCGPILGDILHVADHQGTHHKQKLHRCEAWGNKLYDSGNFHQHQNEHIGEKPYRGSVEEALFA-KRCK----------LHVSGESSVFS--ESGKDFLPRSGLLQQEASHTGEKSNSKTECVSPIQCGGAHYSCGESMKHFSTKHILSQHQRLLTREECYVCCECGKSFSKYASLSNHQRVHTE-KKHECGECGKSFSKYVSFSNHQRVHTEKKHECGECGKSFSKYVSFSNHQRVHTGKRPYECGECGKSFSKYASFSNHQRVHTEKKHYECGECGKSF 361 The following BLAST results are available for this feature:
BLAST of TCONS_00049314 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens)) Total hits: 1
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