TCONS_00049317 (transcript) - C. hemisphaerica

Overview
NameTCONS_00049317
Unique NameTCONS_00049317
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2079

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00049317 ID=TCONS_00049317|Name=TCONS_00049317|organism=Clytia hemisphaerica|type=transcript|length=2079bp
aagcaacaaaagccccttcGGGGCAACAGAAGAAAAATTTGTGCTTAATT
TGATAGGATAATTTCTAACGTGTTTTAACGAAAGAAAGCTTTTCACGCAT
TTGAACAGAGCCGCATAAATTTTGATCCTATGAACAAAATTAGTACACTG
CCTAGACAGAGAAAGTtgcagaaaacttttgaaacttttcattGGTGACA
AGAATTGTTTTGTTGAGATTTCTCTAAGGCGAATTGGTTTAACAATTAAA
CTGCAACTTgcttatgttttattttgatgaaagtTGTTTCAAGACTTTAA
AGTTTTCTGCAGTAAAAAgcagaaacatcaaaataagaaaataatttaca
tCTTTGATATCCAGACTAAAAAACAGTGTTTATTGAAGGTAAGAGAATGG
AAGAAAGCAAAGCTTATAAAGAATGGATCAAAAGACGCGAACGAACAAAA
TATGTCGGCTATTTCTTAATGCTACTTTATGGTTTGGAATCAAATGCTGT
TTTAGTATCACTTATGTATTACCTTGCTGAATCGTTTGGAATGGATGATC
AAACTGCCCGAACTTATTTCAGTATTTCGGAAATGTTTAATGCAGTCGGA
CAGTTTTTTGGTGGATTACTTCTCGGACGGTATACAGACGTCACAAGAAA
TTTACGATATGCTTTTCTGGTTAATTTGTTTGCAATCTGTGTAGGGAATT
TAATGTACTCTCTTAATTTTAACATATGGTTATTGCTTATTGGTCGATTG
TTATGTGGATTGAATGAAGCATTACAAACATCACTAGGAGGTGAATTCAG
AAGATGCTATAAAGACAAAGAATTGATTGACGTGTTTGGATGGTACGAAA
TTTGGTTTTCAGTTGGCATAAACGTTGGCCCAGGAATGCCGGTATTTTTC
TCATGGGTTAACATCAAACTTGGAAGATGGAAAATTGACAAATATAATGC
ATTAAATGTTGTGTTATCTTTAATtggttttattattttcattttatcgt
ACTTTTTTGTTGCTGATCTATCAAAAGAATTAGATCACTTGAAGAAGGAA
TACGAGAACACAAATGAAATGGAAACACCAGAGAAACAAGAGGATGTCAA
AGAGCTTTCTCCGTCAAAAACCGAAGATGCCGTTGACAGCAAATTCAGCA
TCATGGAATTGGTACAAGTAGATATTGTATCACTTGTTATTACTTATGGC
GTAATCaggtACGCTACAAGTAGCTTACTTTCAATGATTTCTATGTATGC
AATGTCTCTATTCCACTGGGgaattacttttttatcatgGATGCATCTAT
GTTCTGGGTTTGCTGTATATGCTTTTATCATCGTCCTCATTAAATATGAT
ATTTTCCAAGGTGTACAAAGAATGTATTATTTCTATGTATCATCATCCAT
ATTTGCATTAGTGGCTTTTATTGTGTTAATGTTACCGAGGCTATTCAATA
TCACATCGTTTCCAGAACAAATCACTTATCTAGTGATTGGTATGTTAATC
AAATGTTGGATTTACTTTCATGCCCAATCATCAGGAAAAGTTCTCTTGTT
CACAACTGTTACTCCAGACAAATCTTGCACAATAGATGGTGTACGATCCA
CTTTTGGAGCAACCATGAAACTTCTCGCACTTGCCActggatttttattt
tttgaaactcCACAATGGTTTGTTTTACCCATTGGTATTATACAATTTTT
AGCAATATGTATTGTACTTTATAGACATCATATTTATTTTGCTCATAAta
cttttcaataattttagtCAACTCTTgttaattcgaactcaaacTAGTCT
ATACCAgagtatctcacgtttatcgtttcgtagtacactctacggcaatg
aattttgctCATAATACTTttcaataattacagtgtcgtaactACAGGGG
AGGGGGCTAGGGGTAGCTTAGCCccccaaacaattttttttgaaagtttt
ttttttcatgaaatggaatattttacctttaaattttgcctttattcgaa
ttattttagtttagtttagaATTATTTTGACCCTGGCTACCTGCTTAGCA
ATCCCAAAACGTTTACAAAAGCCAAGGTG
Run BLAST on NCBI

protein sequence of TCONS_00049317-protein

>TCONS_00049317-protein ID=TCONS_00049317-protein|Name=TCONS_00049317-protein|organism=Clytia hemisphaerica|type=polypeptide|length=454bp
MEESKAYKEWIKRRERTKYVGYFLMLLYGLESNAVLVSLMYYLAESFGMD
DQTARTYFSISEMFNAVGQFFGGLLLGRYTDVTRNLRYAFLVNLFAICVG
NLMYSLNFNIWLLLIGRLLCGLNEALQTSLGGEFRRCYKDKELIDVFGWY
EIWFSVGINVGPGMPVFFSWVNIKLGRWKIDKYNALNVVLSLIGFIIFIL
SYFFVADLSKELDHLKKEYENTNEMETPEKQEDVKELSPSKTEDAVDSKF
SIMELVQVDIVSLVITYGVIRYATSSLLSMISMYAMSLFHWGITFLSWMH
LCSGFAVYAFIIVLIKYDIFQGVQRMYYFYVSSSIFALVAFIVLMLPRLF
NITSFPEQITYLVIGMLIKCWIYFHAQSSGKVLLFTTVTPDKSCTIDGVR
STFGATMKLLALATGFLFFETPQWFVLPIGIIQFLAICIVLYRHHIYFAH
NTFQ
Run BLAST on NCBI

transcript from alignment at scaffold_154:903143..907107-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00049317 ID=TCONS_00049317|Name=TCONS_00049317|organism=Clytia hemisphaerica|type=transcript|length=3965bp|location=Sequence derived from alignment at scaffold_154:903143..907107- (Clytia hemisphaerica)
AAGCAACAAAAGCCCCTTCGGGGCAACAGAAGAAAAATTTGTGCTTAATT TGATAGGATAATTTCTAACGTGTTTTAACGAAAGAAAGCTTTTCACGCAT TTGAACAGAGCCGCATAAATTTTGATCCTATGAACAAAATTAGTACACTG CCTAGACAGAGAAAGTTGCAGAAAACTTTTGAAACTTTTCATTGGTGACA AGAATTGTTTTGTTGAGATTTCTCTAAGGCGAATTGGTTTAACAATTAAA CTGCAACTTGCTTATGTTTTATTTTGATGAAAGTTGTTTCAAGACTTTAA AGTTTTCTGCAGTAAAAAGCAGAAACATCAAAATAAGAAAATAATTTACA TCTTTGATATCCAGACTAAAAAACAGTGTTTATTGAAGGTAAGAGAATGG AAGAAAGCAAAGCTTATAAAGAATGGATCAAAAGACGCGAACGAACAAAA TATGTCGGCTATTTCTTAATGCTACTTTATGGTTTGGAATCAAATGCTGT TTTAGTATCACTTATGTATTACCTTGCTGAATCGTTTGGAATGGATGATC AAACTGCCCGAACTTATTTCAGTATTTCGGAAATGTTTAATGCAGTCGGA CAGTTTTTTGGTGGATTACTTCTCGGACGGTATACAGACGTCACAAGAAA TTTACGATATGCTTTTCTGGTTAATTTGTTTGCAATCTGTGTAGGGAATT TAATGTACTCTCTTAATTTTAACATATGGTTATTGCTTATTGGTCGATTG TTATGTGGATTGAATGAAGCATTACAAACATCACTAGGAGGTGTGTCATT CACGTATTTCAAACACATTTTTATAAAGTAAGAGGGGAAAATCCTTAGGA CCCGTGACAGCTTTTATGTGACACCTAAACCTGGTCCATTTCAGAGCATT TTTCACGAGGGGGGTTTCTGCTAAGGCCTAGGAAAACTTTTTAGGACCAA AAAAACTGACGTCACAGGCAAAACCCCCCAGCCCTGAAAATTTTGGGAAA TTTCAAAAGTCAATAAAACGCAAAACCAATTTTACTTTTGGAAGATCTCA AAGAACGATATAGAGGACTATTAGTGGGGTTGTCTAGCATAATTTAAGGG AAAAAAATAAGATCCAGCTGAAACTTTCTCCAGACCTTCTCTATAGGATG GTTATGCCTCAGGAAAAAATCCCCTAAAATCCCACTGGTGTAACATCCTT TTTTTGGGACATTTCTTTTTTCCCCAGGCAAAACCCTAGCAAAACCCTAA GGCCAAAATTTCATTACCTAACTCAAGATAATTCACGCAGAAGATGCTAT ATATGGTCAATTTTAGACCAAAATGTGGGGAAAAGTGGAACTTGCGCATG CAATGTCTCGAGTTAGGTAAGGAAATCGGCTATAACCGTTTAAAAGTCTT CTATATAGTTTTTCGAGAGCTTTTGAATGGTATACTTGATAATGTCTGAA AATGAGTTTGAAATTTTCAAAAAATTTCGCCCTTAGGATTTTGCCTGGGG GAAATAGAAATTGCCCAAAAAAGGGATGTTCCACCAGTGCGATTTTAGGG GATTTTTTCCTGAGGTATAAGCATCCTATAGAGAAGGTCTGGAGAAAGTT TCAGCTAGATCTTATTTTTTCCTACAAACAGCCTGTATTTTTGTAACACG ACCACACTATATTAAGTGGATATAGATTTCTCTACCTATCTCGAGAAAAT TACATATAAGAGCATGAAACTTGGCCATAAACCAATTTAAATTAATTTTC GTGTCAGATCTTAAGTATGCACGAAGGTACGTGTATTTATTTAAGAGAAA CAAACGTGTATAAGTATAAGTCTGGAATAGAATTAAATATAGAATGTAAC TCTTTCAAATTGTTCATTTTGTGATGACAGTTTTGTTGATAAAACATAAG AACCCCTTGCAAGAAAATGCACAGAATATCGAATTTGAAATATCCGCTGC TCAAGGAATTTTTGGCAACTTTTATTGGTTTTCACATATTTACTAATGCC AATCTTTCAACTAGATTCTATCAAAATTTTGAGGCAGCTGCTATTTAGAT CTAAAGATATTTATAGCAAAGAAACTTCCACAAACAACAAAGGATTGTTT ACCTCTCGAAAGTTTCCCGATAAAATGAAAATTACTTGAAAATATTAAAT AAATAAATCCTTCCATACATCTTCAGTAAAAGATTAAATAACAGAAGCTG CTATTGGTTCATTTTTGATTTTCTTTTTCATTTACTCGAAAAAAGTTCGC ATTTTACCTAAAAATACGAGGTTCCGTTGGACAAAATAGCTTTACTTTAG TTCTTATAATCTATATCTCGACTGATTTTTGCTATCAATGATTTGTAATC AAAGGAGTCCAATTTGAAAGAAATTTCTAAAGAGTTTTATGACTTCTTTC CATCCAACCTCTATATTTTTATTGACGATTGACTAAGTCAATCAGTGATA TTTTATGACAATAACTATCTTTCTTCTATTTAAAGGTGAATTCAGAAGAT GCTATAAAGACAAAGAATTGATTGACGTGTTTGGATGGTACGAAATTTGG TTTTCAGTTGGCATAAACGTTGGCCCAGGAATGCCGGTATTTTTCTCATG GGTTAACATCAAACTTGGAAGATGGAAAATTGACAAATATAATGCATTAA ATGTTGTGTTATCTTTAATTGGTTTTATTATTTTCATTTTATCGTACTTT TTTGTTGCTGATCTATCAAAAGAATTAGATCACTTGAAGAAGGAATACGA GAACACAAATGAAATGGAAACACCAGAGAAACAAGAGGATGTCAAAGAGC TTTCTCCGTCAAAAACCGAAGATGCCGTTGACAGCAAATTCAGCATCATG GAATTGGTACAAGTAGATATTGTATCACTTGTTATTACTTATGGCGTAAT CAGGTCAGCAAAATTTGAATTTAAAAGTCATTCGCTTTAAAGCTATCACT TTGAAATATCAATCCCCATCAAGTTTCAATTCATTCCCCCCCCCCCTTCC TACTGGCTGAAAAACCTTACTGGGTCCATGAGAAGGGGGTGTAATCATGA ATTGAAGTTCCTAACGTGAACAACTTTTTACTTTTTCTTTTTAGGTACGC TACAAGTAGCTTACTTTCAATGATTTCTATGTATGCAATGTCTCTATTCC ACTGGGGAATTACTTTTTTATCATGGATGCATCTATGTTCTGGGTTTGCT GTATATGCTTTTATCATCGTCCTCATTAAATATGATATTTTCCAAGGTGT ACAAAGAATGTATTATTTCTATGTATCATCATCCATATTTGCATTAGTGG CTTTTATTGTGTTAATGTTACCGAGGCTATTCAATATCACATCGTTTCCA GAACAAATCACTTATCTAGTGATTGGTATGTTAATCAAATGTTGGATTTA CTTTCATGCCCAATCATCAGGAAAAGTTCTCTTGTTCACAACTGTTACTC CAGACAAATCTTGCACAATAGATGGTGTACGATCCACTTTTGGAGCAACC ATGAAACTTCTCGCACTTGCCACTGGATTTTTATTTTTTGAAACTCCACA ATGGTTTGTTTTACCCATTGGTATTATACAATTTTTAGCAATATGTATTG TACTTTATAGACATCATATTTATTTTGCTCATAATACTTTTCAATAATTT TAGTCAACTCTTGTTAATTCGAACTCAAACTAGTCTATACCAGAGTATCT CACGTTTATCGTTTCGTAGTACACTCTACGGCAATGAATTTTGCTCATAA TACTTTTCAATAATTACAGTGTCGTAACTACAGGGGAGGGGGCTAGGGGT AGCTTAGCCCCCCAAACAATTTTTTTTGAAAGTTTTTTTTTTCATGAAAT GGAATATTTTACCTTTAAATTTTGCCTTTATTCGAATTATTTTAGTTTAG TTTAGAATTATTTTGACCCTGGCTACCTGCTTAGCAATCCCAAAACGTTT ACAAAAGCCAAGGTG

Coding sequence (CDS) from alignment at scaffold_154:903143..907107-

>TCONS_00049317 ID=TCONS_00049317|Name=TCONS_00049317|organism=Clytia hemisphaerica|type=CDS|length=4095bp|location=Sequence derived from alignment at scaffold_154:903143..907107- (Clytia hemisphaerica)
GTACGCTACAAGTAGCTTACTTTCAATGATTTCTATGTATGCAATGTCTC
TATTCCACTGGGGAATTACTTTTTTATCATGGATGCATCTATGTTCTGGG
TTTGCTGTATATGCTTTTATCATCGTCCTCATTAAATATGATATTTTCCA
AGGTGTACAAAGAATGTATTATTTCTATGTATCATCATCCATATTTGCAT
TAGTGGCTTTTATTGTGTTAATGTTACCGAGGCTATTCAATATCACATCG
TTTCCAGAACAAATCACTTATCTAGTGATTGGTATGTTAATCAAATGTTG
GATTTACTTTCATGCCCAATCATCAGGAAAAGTTCTCTTGTTCACAACTG
TTACTCCAGACAAATCTTGCACAATAGATGGTGTACGATCCACTTTTGGA
GCAACCATGAAACTTCTCGCACTTGCCACTGGATTTTTATTTTTTGAAAC
TCCACAATGGTTTGTTTTACCCATTGGTATTATACAATTTTTAGCAATAT
GTATTGTACTTTATAGACATCATATTTATTTTGCTCATAATACTTTTCAA
TAAGTGAATTCAGAAGATGCTATAAAGACAAAGAATTGATTGACGTGTTT
GGATGGTACGAAATTTGGTTTTCAGTTGGCATAAACGTTGGCCCAGGAAT
GCCGGTATTTTTCTCATGGGTTAACATCAAACTTGGAAGATGGAAAATTG
ACAAATATAATGCATTAAATGTTGTGTTATCTTTAATTGGTTTTATTATT
TTCATTTTATCGTACTTTTTTGTTGCTGATCTATCAAAAGAATTAGATCA
CTTGAAGAAGGAATACGAGAACACAAATGAAATGGAAACACCAGAGAAAC
AAGAGGATGTCAAAGAGCTTTCTCCGTCAAAAACCGAAGATGCCGTTGAC
AGCAAATTCAGCATCATGGAATTGGTACAAGTAGATATTGTATCACTTGT
TATTACTTATGGCGTAATCAGATGGAAGAAAGCAAAGCTTATAAAGAATG
GATCAAAAGACGCGAACGAACAAAATATGTCGGCTATTTCTTAATGCTAC
TTTATGGTTTGGAATCAAATGCTGTTTTAGTATCACTTATGTATTACCTT
GCTGAATCGTTTGGAATGGATGATCAAACTGCCCGAACTTATTTCAGTAT
TTCGGAAATGTTTAATGCAGTCGGACAGTTTTTTGGTGGATTACTTCTCG
GACGGTATACAGACGTCACAAGAAATTTACGATATGCTTTTCTGGTTAAT
TTGTTTGCAATCTGTGTAGGGAATTTAATGTACTCTCTTAATTTTAACAT
ATGGTTATTGCTTATTGGTCGATTGTTATGTGGATTGAATGAAGCATTAC
AAACATCACTAGGAGGTACGCTACAAGTAGCTTACTTTCAATGATTTCTA
TGTATGCAATGTCTCTATTCCACTGGGGAATTACTTTTTTATCATGGATG
CATCTATGTTCTGGGTTTGCTGTATATGCTTTTATCATCGTCCTCATTAA
ATATGATATTTTCCAAGGTGTACAAAGAATGTATTATTTCTATGTATCAT
CATCCATATTTGCATTAGTGGCTTTTATTGTGTTAATGTTACCGAGGCTA
TTCAATATCACATCGTTTCCAGAACAAATCACTTATCTAGTGATTGGTAT
GTTAATCAAATGTTGGATTTACTTTCATGCCCAATCATCAGGAAAAGTTC
TCTTGTTCACAACTGTTACTCCAGACAAATCTTGCACAATAGATGGTGTA
CGATCCACTTTTGGAGCAACCATGAAACTTCTCGCACTTGCCACTGGATT
TTTATTTTTTGAAACTCCACAATGGTTTGTTTTACCCATTGGTATTATAC
AATTTTTAGCAATATGTATTGTACTTTATAGACATCATATTTATTTTGCT
CATAATACTTTTCAATAAGTGAATTCAGAAGATGCTATAAAGACAAAGAA
TTGATTGACGTGTTTGGATGGTACGAAATTTGGTTTTCAGTTGGCATAAA
CGTTGGCCCAGGAATGCCGGTATTTTTCTCATGGGTTAACATCAAACTTG
GAAGATGGAAAATTGACAAATATAATGCATTAAATGTTGTGTTATCTTTA
ATTGGTTTTATTATTTTCATTTTATCGTACTTTTTTGTTGCTGATCTATC
AAAAGAATTAGATCACTTGAAGAAGGAATACGAGAACACAAATGAAATGG
AAACACCAGAGAAACAAGAGGATGTCAAAGAGCTTTCTCCGTCAAAAACC
GAAGATGCCGTTGACAGCAAATTCAGCATCATGGAATTGGTACAAGTAGA
TATTGTATCACTTGTTATTACTTATGGCGTAATCAGATGGAAGAAAGCAA
AGCTTATAAAGAATGGATCAAAAGACGCGAACGAACAAAATATGTCGGCT
ATTTCTTAATGCTACTTTATGGTTTGGAATCAAATGCTGTTTTAGTATCA
CTTATGTATTACCTTGCTGAATCGTTTGGAATGGATGATCAAACTGCCCG
AACTTATTTCAGTATTTCGGAAATGTTTAATGCAGTCGGACAGTTTTTTG
GTGGATTACTTCTCGGACGGTATACAGACGTCACAAGAAATTTACGATAT
GCTTTTCTGGTTAATTTGTTTGCAATCTGTGTAGGGAATTTAATGTACTC
TCTTAATTTTAACATATGGTTATTGCTTATTGGTCGATTGTTATGTGGAT
TGAATGAAGCATTACAAACATCACTAGGAGGTACGCTACAAGTAGCTTAC
TTTCAATGATTTCTATGTATGCAATGTCTCTATTCCACTGGGGAATTACT
TTTTTATCATGGATGCATCTATGTTCTGGGTTTGCTGTATATGCTTTTAT
CATCGTCCTCATTAAATATGATATTTTCCAAGGTGTACAAAGAATGTATT
ATTTCTATGTATCATCATCCATATTTGCATTAGTGGCTTTTATTGTGTTA
ATGTTACCGAGGCTATTCAATATCACATCGTTTCCAGAACAAATCACTTA
TCTAGTGATTGGTATGTTAATCAAATGTTGGATTTACTTTCATGCCCAAT
CATCAGGAAAAGTTCTCTTGTTCACAACTGTTACTCCAGACAAATCTTGC
ACAATAGATGGTGTACGATCCACTTTTGGAGCAACCATGAAACTTCTCGC
ACTTGCCACTGGATTTTTATTTTTTGAAACTCCACAATGGTTTGTTTTAC
CCATTGGTATTATACAATTTTTAGCAATATGTATTGTACTTTATAGACAT
CATATTTATTTTGCTCATAATACTTTTCAATAAGTGAATTCAGAAGATGC
TATAAAGACAAAGAATTGATTGACGTGTTTGGATGGTACGAAATTTGGTT
TTCAGTTGGCATAAACGTTGGCCCAGGAATGCCGGTATTTTTCTCATGGG
TTAACATCAAACTTGGAAGATGGAAAATTGACAAATATAATGCATTAAAT
GTTGTGTTATCTTTAATTGGTTTTATTATTTTCATTTTATCGTACTTTTT
TGTTGCTGATCTATCAAAAGAATTAGATCACTTGAAGAAGGAATACGAGA
ACACAAATGAAATGGAAACACCAGAGAAACAAGAGGATGTCAAAGAGCTT
TCTCCGTCAAAAACCGAAGATGCCGTTGACAGCAAATTCAGCATCATGGA
ATTGGTACAAGTAGATATTGTATCACTTGTTATTACTTATGGCGTAATCA
GATGGAAGAAAGCAAAGCTTATAAAGAATGGATCAAAAGACGCGAACGAA
CAAAATATGTCGGCTATTTCTTAATGCTACTTTATGGTTTGGAATCAAAT
GCTGTTTTAGTATCACTTATGTATTACCTTGCTGAATCGTTTGGAATGGA
TGATCAAACTGCCCGAACTTATTTCAGTATTTCGGAAATGTTTAATGCAG
TCGGACAGTTTTTTGGTGGATTACTTCTCGGACGGTATACAGACGTCACA
AGAAATTTACGATATGCTTTTCTGGTTAATTTGTTTGCAATCTGTGTAGG
GAATTTAATGTACTCTCTTAATTTTAACATATGGTTATTGCTTATTGGTC
GATTGTTATGTGGATTGAATGAAGCATTACAAACATCACTAGGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_031289XLOC_031289Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00049317-proteinTCONS_00049317-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00049317-exon-scaffold_154-1575043694:906318..907107TCONS_00049317-exon-scaffold_154-1575043694:906318..907107Clytia hemisphaericaexon
TCONS_00049317-exon-scaffold_154-1575043694:904205..904622TCONS_00049317-exon-scaffold_154-1575043694:904205..904622Clytia hemisphaericaexon
TCONS_00049317-exon-scaffold_154-1575043694:903143..904013TCONS_00049317-exon-scaffold_154-1575043694:903143..904013Clytia hemisphaericaexon
TCONS_00049317-exon-scaffold_154-1510915933:906318..907107TCONS_00049317-exon-scaffold_154-1510915933:906318..907107Clytia hemisphaericaexon
TCONS_00049317-exon-scaffold_154-1510915933:904205..904622TCONS_00049317-exon-scaffold_154-1510915933:904205..904622Clytia hemisphaericaexon
TCONS_00049317-exon-scaffold_154-1510915933:903143..904013TCONS_00049317-exon-scaffold_154-1510915933:903143..904013Clytia hemisphaericaexon
TCONS_00049317-exon-scaffold_154-1491911889:906318..907107TCONS_00049317-exon-scaffold_154-1491911889:906318..907107Clytia hemisphaericaexon
TCONS_00049317-exon-scaffold_154-1491911889:904205..904622TCONS_00049317-exon-scaffold_154-1491911889:904205..904622Clytia hemisphaericaexon
TCONS_00049317-exon-scaffold_154-1491911889:903143..904013TCONS_00049317-exon-scaffold_154-1491911889:903143..904013Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_154supercontigscaffold_154:903143..907107 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.26945 2.82164 1.38906 0.544187 0.127924 0.121326 0.756664 1.3016 3.34604 2.21916 0.757393 1.78815 3.2284 3.11422 1.46761 0.648928 2.32512 1.62269 2.12037 1.9554 0.367322 0.161752 2.81589 2.65235 0.382766 0.527198 2.20315 0.469558 0.758628 0.886086
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR011701MFS
IPR020846MFS_dom
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055085 transmembrane transport
cellular_component GO:0016021 integral component of membrane
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00049317 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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