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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00049353 ID=TCONS_00049353|Name=TCONS_00049353|organism=Clytia hemisphaerica|type=transcript|length=1323bp
gcaaaatatttgcTATTTTCCACATCTgcactgaattttctgatttaaaa
acagaagaatttaaaaataatgtaaaaaataaaaatatgtaaaaaatatC
ATTCAAACTCGGATCCTCCAGCGTCACAATTTCTAACTTGTAAGCTTTGT
AAGCTCTCTGTAAATTAGCTTGAATCAGCTTCAAAATGTCTTATAAATAC
TTGCAAAAGTTCCTAAGCATTATGTTATAGATAATATTTTCCTAATCTAA
TCCCTTCGACTTCTCAAAAAGACACCAAAATTTCGACGAAGCTCGGTTTC
CTCAGGGTGACGAAGTTTATGGGTGAATATAAATATTCCTGTGCTAATCA
ATTTATTGCTCTCCGATTATTGTAGCTTTTATTTCTTAACCAAGTTTTTT
GTAATTGTGTATGCTGTTGGTATATAAGCTTTAATCCGCTTCAAAAAAGT
GTTAGAGATACCTTGAGAAATAAACGGCTGGACCATTGAATTAGCCTGCG
AATGCCGTTTTGGAAAACCCAACATTCTAGCTGTACGTTGAAGATCTCGA
TTGACAAATTTTCTGCTATCTCTAATGAATGGATTAGGGTGATCAAAATG
TGGTATCGATTCGTAGTTGCtcgatttcaaattattgaaaaattccTTTT
CAGTGATTTTACCCTCCGCAACATCCGTACGTAACGCTAATAAGGCTTTC
ATAAATAAAGCGTTAGCGGCCATTGTTGTCATGCCAACACCACCTAGGCC
ATAAACCATAACTGTGTTTTGGAGTGGAGCCAAAAATTGTGGTGAATTGG
ATGAAGTCACACCACGAGCACAACTTCGTACAGATAAGATATCATATTCC
ATCCCCTCTTGACCTAACTGGAGAAGTTCCTTTGCATTAGATTCGAACAT
GTTTAATATGAGCTCAGGATTGGTGTAGCGGTCAAGATTGACGCTTGCTG
CACCAGCAACCAGCATTGTAAAATACTTAAAATGCTTACCATCGATGTAA
ACATCTTTTTCACCAAGTCGAACAATATGAAGTAAAACCCCTGTCAAATG
GGTCCTGAaactttctaattttgattCAGGAACAATAGACATATCCACTT
TGACCAAGAAGGTACATGTTCCACCAGCCATGGGTAACATAGTTTTCATT
AGATTGGATGATTGAAAAAGACTGTTCATTAAAGTTCGATCTTTAAGGGG
TGGTAATACTTTCAGTTGACTCATACTTGGACCAAGTGAAAGATAAAGTG
ATTTCACATTCCTTGTGATAAACTCTTTGGTTTTGGTGTTCTGCAAGACA
ATGCGTGTTGCTGTTGCATCTTG Run BLAST on NCBI protein sequence of TCONS_00049353-protein >TCONS_00049353-protein ID=TCONS_00049353-protein|Name=TCONS_00049353-protein|organism=Clytia hemisphaerica|type=polypeptide|length=314bp
QDATATRIVLQNTKTKEFITRNVKSLYLSLGPSMSQLKVLPPLKDRTLMN
SLFQSSNLMKTMLPMAGGTCTFLVKVDMSIVPESKLESFRTHLTGVLLHI
VRLGEKDVYIDGKHFKYFTMLVAGAASVNLDRYTNPELILNMFESNAKEL
LQLGQEGMEYDILSVRSCARGVTSSNSPQFLAPLQNTVMVYGLGGVGMTT
MAANALFMKALLALRTDVAEGKITEKEFFNNLKSSNYESIPHFDHPNPFI
RDSRKFVNRDLQRTARMLGFPKRHSQANSMVQPFISQGISNTFLKRIKAY
IPTAYTITKNLVKK Run BLAST on NCBI transcript from alignment at scaffold_154:865076..866398 Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00049353 ID=TCONS_00049353|Name=TCONS_00049353|organism=Clytia hemisphaerica|type=transcript|length=1323bp|location=Sequence derived from alignment at scaffold_154:865076..866398 (Clytia hemisphaerica)
CAAGATGCAACAGCAACACGCATTGTCTTGCAGAACACCAAAACCAAAGA
GTTTATCACAAGGAATGTGAAATCACTTTATCTTTCACTTGGTCCAAGTA
TGAGTCAACTGAAAGTATTACCACCCCTTAAAGATCGAACTTTAATGAAC
AGTCTTTTTCAATCATCCAATCTAATGAAAACTATGTTACCCATGGCTGG
TGGAACATGTACCTTCTTGGTCAAAGTGGATATGTCTATTGTTCCTGaat
caaaattagaaagttTCAGGACCCATTTGACAGGGGTTTTACTTCATATT
GTTCGACTTGGTGAAAAAGATGTTTACATCGATGGTAAGCATTTTAAGTA
TTTTACAATGCTGGTTGCTGGTGCAGCAAGCGTCAATCTTGACCGCTACA
CCAATCCTGAGCTCATATTAAACATGTTCGAATCTAATGCAAAGGAACTT
CTCCAGTTAGGTCAAGAGGGGATGGAATATGATATCTTATCTGTACGAAG
TTGTGCTCGTGGTGTGACTTCATCCAATTCACCACAATTTTTGGCTCCAC
TCCAAAACACAGTTATGGTTTATGGCCTAGGTGGTGTTGGCATGACAACA
ATGGCCGCTAACGCTTTATTTATGAAAGCCTTATTAGCGTTACGTACGGA
TGTTGCGGAGGGTAAAATCACTGAAAAggaatttttcaataatttgaaat
cgaGCAACTACGAATCGATACCACATTTTGATCACCCTAATCCATTCATT
AGAGATAGCAGAAAATTTGTCAATCGAGATCTTCAACGTACAGCTAGAAT
GTTGGGTTTTCCAAAACGGCATTCGCAGGCTAATTCAATGGTCCAGCCGT
TTATTTCTCAAGGTATCTCTAACACTTTTTTGAAGCGGATTAAAGCTTAT
ATACCAACAGCATACACAATTACAAAAAACTTGGTTAAGAAATAAAAGCT
ACAATAATCGGAGAGCAATAAATTGATTAGCACAGGAATATTTATATTCA
CCCATAAACTTCGTCACCCTGAGGAAACCGAGCTTCGTCGAAATTTTGGT
GTCTTTTTGAGAAGTCGAAGGGATTAGATTAGGAAAATATTATCTATAAC
ATAATGCTTAGGAACTTTTGCAAGTATTTATAAGACATTTTGAAGCTGAT
TCAAGCTAATTTACAGAGAGCTTACAAAGCTTACAAGTTAGAAATTGTGA
CGCTGGAGGATCCGAGTTTGAATGatattttttacatatttttatttttt
acattatttttaaattcttctgtttttaaatcagaaaattcagtgcAGAT
GTGGAAAATAgcaaatattttgc Coding sequence (CDS) from alignment at scaffold_154:865076..866398 >TCONS_00049353 ID=TCONS_00049353|Name=TCONS_00049353|organism=Clytia hemisphaerica|type=CDS|length=945bp|location=Sequence derived from alignment at scaffold_154:865076..866398 (Clytia hemisphaerica)
CAAGATGCAACAGCAACACGCATTGTCTTGCAGAACACCAAAACCAAAGA
GTTTATCACAAGGAATGTGAAATCACTTTATCTTTCACTTGGTCCAAGTA
TGAGTCAACTGAAAGTATTACCACCCCTTAAAGATCGAACTTTAATGAAC
AGTCTTTTTCAATCATCCAATCTAATGAAAACTATGTTACCCATGGCTGG
TGGAACATGTACCTTCTTGGTCAAAGTGGATATGTCTATTGTTCCTGaat
caaaattagaaagttTCAGGACCCATTTGACAGGGGTTTTACTTCATATT
GTTCGACTTGGTGAAAAAGATGTTTACATCGATGGTAAGCATTTTAAGTA
TTTTACAATGCTGGTTGCTGGTGCAGCAAGCGTCAATCTTGACCGCTACA
CCAATCCTGAGCTCATATTAAACATGTTCGAATCTAATGCAAAGGAACTT
CTCCAGTTAGGTCAAGAGGGGATGGAATATGATATCTTATCTGTACGAAG
TTGTGCTCGTGGTGTGACTTCATCCAATTCACCACAATTTTTGGCTCCAC
TCCAAAACACAGTTATGGTTTATGGCCTAGGTGGTGTTGGCATGACAACA
ATGGCCGCTAACGCTTTATTTATGAAAGCCTTATTAGCGTTACGTACGGA
TGTTGCGGAGGGTAAAATCACTGAAAAggaatttttcaataatttgaaat
cgaGCAACTACGAATCGATACCACATTTTGATCACCCTAATCCATTCATT
AGAGATAGCAGAAAATTTGTCAATCGAGATCTTCAACGTACAGCTAGAAT
GTTGGGTTTTCCAAAACGGCATTCGCAGGCTAATTCAATGGTCCAGCCGT
TTATTTCTCAAGGTATCTCTAACACTTTTTTGAAGCGGATTAAAGCTTAT
ATACCAACAGCATACACAATTACAAAAAACTTGGTTAAGAAATAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00049353-exon-scaffold_154-1491911889:865076..866398 | TCONS_00049353-exon-scaffold_154-1491911889:865076..866398 | Clytia hemisphaerica | exon |
| TCONS_00049353-exon-scaffold_154-1510915933:865076..866398 | TCONS_00049353-exon-scaffold_154-1510915933:865076..866398 | Clytia hemisphaerica | exon |
| TCONS_00049353-exon-scaffold_154-1575043694:865076..866398 | TCONS_00049353-exon-scaffold_154-1575043694:865076..866398 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_154 | supercontig | scaffold_154:865076..866398 . |
Blast
The following BLAST results are available for this feature:
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