TCONS_00049365 (transcript) - C. hemisphaerica

Overview
NameTCONS_00049365
Unique NameTCONS_00049365
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1137

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00049365 ID=TCONS_00049365|Name=TCONS_00049365|organism=Clytia hemisphaerica|type=transcript|length=1137bp
Ncagtctgtgtgtgaacccttgttgacagacttgctgaactttggaaacc
caggcaaacgcacataatcaacttaccataaaaactctttcataagctct
aaagattttcaaaactaataaaaaccacatcaaaacatcagccacatgta
tttagacttccagccaacagccattttgtttcgaaatgaatatatgtttt
cattttcatttgtttttcttttttctgcagagtcagctttttccataaat
tgcTTGcacatcgaaattatcaaaatgcacgcgaaagtactgctaagtaa
tacgccaaaagctggccaatcaggccgaacctgcattgcagggaaaaatg
tccctgtaggcgagttacctgcgtcaagcgttaaacaagcagcaaaaata
tcataaactagactgtgaaaaaagtttaacgcttggattcccaggctacg
gACTTCACCGTCAATACCGAGGAGCCTGGAATCGAAGTCGCTCGAACAGT
ATACGATATGGACCATGGTGAAGCTCCACAGGCATACACGGGAGCATACA
AGCAAGCCATGCAAAAGGGAAATGCAGTGGAAATAGTATCGGAGCTGAAA
ATGGAATGTGGACAGATGGTAGCAATATGGCTGATTGATAGCAAAACAGA
ACCTACAATAGGGAAGATCATCGAAGTTGAGGAAAATCAAGTGAGAGTAA
ATTATTGGAAGGGAAGCTGGAATAAGAAATGGGCTCCCCATATGCTCTAT
TCAAACGACAAAAGGCGCAAGATGATACCGTGGGACGGCTGGATTGCAAA
AGCAAGCGTTATTCTATATGGGTTTACACTAATCAACGACGTCCTGACCA
AGTCACATCGTGAATATTTACGTAAGAAATACAAGGAATTGAAATAGATG
CCGCTAGATGTATAATTTAACCTTtaaaataggccatttcacggtcgCAA
ATCGTAATGGGGAATAAGGACCACTGAGCACTAATGACAACTTATTATTG
GTCAAACTTTTTTGCGTCAAGCTAACCGGAAGTCGTTACTAGAGGGCAAC
TATTCCTGACAACCATTTTCCATTTTGACTATGAAATAGCCTATTAGGTA
GATTACTAATCTTTATTACAAGCACGGCTCCACCCAG
Run BLAST on NCBI

protein sequence of TCONS_00049365-protein

>TCONS_00049365-protein ID=TCONS_00049365-protein|Name=TCONS_00049365-protein|organism=Clytia hemisphaerica|type=polypeptide|length=129bp
MDHGEAPQAYTGAYKQAMQKGNAVEIVSELKMECGQMVAIWLIDSKTEPT
IGKIIEVEENQVRVNYWKGSWNKKWAPHMLYSNDKRRKMIPWDGWIAKAS
VILYGFTLINDVLTKSHREYLRKKYKELK
Run BLAST on NCBI

transcript from alignment at scaffold_155:149452..164506-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00049365 ID=TCONS_00049365|Name=TCONS_00049365|organism=Clytia hemisphaerica|type=transcript|length=15055bp|location=Sequence derived from alignment at scaffold_155:149452..164506- (Clytia hemisphaerica)
NCAGTCTGTGTGTGAACCCTTGTTGACAGACTTGCTGAACTTTGGAAACC
CAGGCAAACGCACATAATCAACTTACCATAAAAACTCTTTCATAAGCTCT
AAAGATTTTCAAAACTAATAAAAACCACATCAAAACATCAGCCACATGTA
TTTAGACTTCCAGCCAACAGCCATTTTGTTTCGAAATGAATATATGTTTT
CATTTTCATTTGTTTTTCTTTTTTCTGCAGAGTCAGCTTTTTCCATAAAT
TGCTTGCACATCGAAATTATCAAAATGCACGCGAAAGTACTGCTAAGTAA
TACGCCAAAAGCTGGCCAATCAGGCCGAACCTGCATTGCAGGGAAAAATG
TCCCTGTAGGCGAGTTACCTGCGTCAAGCGTTAAACAAGCAGCAAAAATA
TCATAAACTAGACTGTGAAAAAAGTTTAACGCTTGGATTCCCAGGCTACG
GACTTCACCGTCAATACCGAGGAGCCTGGAATCGAAGTCGCTCGAACAGT
ATACGATATGGACCATGGTGAAGCTCCACAGGTATTGAATTATAATAAAG
AATCATTTGAAATTAGACATAGCCCCTGCTATAGCCGGTGTTGTGCGCAG
ATATGTAATTTCTGCGCAGATATGTAATTATTTTGCGCAGATATGTAATT
TCTGCGCAAATATGTAATTATTTTGCGCAACTACGTAATTTCGAGCTGCG
CAGATATGTAATTTCTGCGCAGATATGTAATTATTTTGCGCAGATATGTA
ATTTCTGCGCAAATATGTAATTATTTTGCGCAACTACGTAATTTCGAGCT
GCGCAGATATGTAATTAAATTTTTGCGCAGATATGTAAAACACGATTTTT
AAAATCAATGGTACCCCCTTGATAGCTTTTACCATTACTGTTACCTTTTT
TTCGACTTAAGGTATTTTAGGTAATTCCTATCGAATACAAGAAGTAATAT
CTTATAACAACAATTTTTAGCTTTGGGTGATTGGTTCTTTCAAAGCAAAA
ATGGAATAGCGCCTTAAATGAAAGCAATTATTTTTCTTATAAGAATCATC
GTTATAAGAAAATTCTCTATAACTTTTCAACCACTAAGTTTTAGCTTTCG
GTGATTGGTTCTTTCGAAGGAAACATGGAATAACGCCTAAAATTAAAGTA
ATTATTTTTCTTATAAGCATCATCTTTATAAGAAAATTCTCTATAACTTT
TCAATTACTAAGTTTTAGCTTTTGGTGATTGGTTCTTTCAAAGGAAACAT
GGAATAGCACCTAAAATTAAAGTAATTATTTTTCTTATAAGCATCATCTT
TATAAGAAAATGATCTACCGGGTGCACCAAAAAAAAGTATACAGGTTTGT
CGAGATATTGTGAGCTTCAGGATTTAAATTTTTTGTTCATTCTTTTTTTA
TTGTATAGAGGATGCTCTAACTTGAATTTTGAGCTATTATACATTAAATT
TGAAAAAGCAGTTCGAAAGTTATTTCCAAAAAACTAACTTTTTTTCCATG
TCGAAATTTCAAAAAATCACAATATTGTGAAGGCCTTTCATCATTGGAAA
TTCTGAAGAATGTTACATAATTCAGGAATATTTTGACACTGATTGTTAAT
GACATTTAAAAAAATTACACGTCTTTCTTACTTTCCCCTTACAAATTAAA
CTAAGGCAAAATATTTGACTTTAAGCCATCTAAAAGGAGACAAATTTAAT
TTTTTTGAAGCGGAATTGGCATTCACAATGACACAATGGCTCTATCGAAA
GAAATAGGGAATTTTGCTAAATCTAACATTAGTTTATTATAATTTTATAA
GGACACGGTTTTTTTTCTAAGTGGAATAGGCTTTCAGAGATTTGATTTAT
CAAACAAAAGCCAACAAATATTGTTTATGAGTTATGAATTGTGTTCTTAT
AAAGTTGATGCTCATGAGAAAAACAAAATTTTCTAGCTTAAGTACAATGC
TATATTTGCTTTGAAAAAACCTAACGCCGAAAGCTAATAATCATTGGTTT
AAGAGTTATGAATTGTGTTCTTATAAAGTTGATGCTTATAATAAAAACAA
CAATCGCCAAATGTTTGCCTTAGTCCAAGAATAATGTTCAAGATATTACT
TCTTGTATGTGAAAAATTAATGTTAAAATTTAGTTAGTTTTTCAAAAAAT
AACTAAGTCAAAAAGGTTGTGTTTTACATATCTGCGCAGAAATTTAATTA
CATATCTGCGCAGCTGAAAATTACATAGTTGCGCAAAATAATTACATATT
TGCGCAGAAATTATATATCTGCGCAAAATAATTACATATTTGCGCAGAAA
TTACATATCTGCGCATAACAGCCGGGACTATAGCCCATAAACTAATCTTA
CTTAAGTGTATGATCAATTATAGCTTTATAATACAACTGCGAAGAATAAT
AATTTTCCGATATAATATCGACACTTTGAGGAGACATTTAATTATTACTC
TTTTAGTAGTGAGAAGAAATTGTTTCAGGACAAAAGGTAGATACATAAAC
TCGCTTAGGCTGCGGTGTGGGGTGGAAATATTTGAAGATAATAGTTCGGT
AATCTCATTTTGGATCTTATGCGTGTTATCAGGGAAACCTACAAGCCAAT
GCCTGAAATATCATTGATGGAGTACATGTACGATATTCGGTAATGGTTGG
GTCCAATGATTTTTAATTACCTTTTTCTCGAACTTGCCATAAATTAACAG
GTTGTTGATAGATTTCAGGTTATTTTTACTCTTACTATTCGTGTTATTCT
ATCCTGTCCAATCCTTGGATGGATTATTTAGCTCATATGCTACAGTTTAA
ACATTCACTTTCAAGTCAATGAGTCTTTTGCTTGTTTTTTTTTTTCAGAG
GATCATGTTGTTCATCTCGAGTCATCTTGCAAAAACGATTGCTTGGGAAA
ACTGCAACTTGTGGATAGATTTTTCGCTCGCAATGATTTTCAAAGATTAT
CATACAAAAACAATGGAGAATACATAGTGAAACAGTTCGAAACATTCGTT
GGAATACGATCAAAGTAAGGATCTGTTTTTACCCTCTCATGCACACATAT
ATCTTCTATTATAAAAAGTGGAGATAGAAAAAGGAATGGCGGGAATGGAT
AGCCGTCGGTAGTTTGCGAGATTGGGTTCGTACGTTTAAACCAAAGTTAG
AAAATTGACACTGAGGGAATAGAACTGTTATTTTTGGACTCCTTACAGAG
GCTGAAAATCTTGTTTTTTAATGGTTTTTGTTATGGGGTTTTATTCTCGG
GGGGACGATCCTCCCACTCTTTCTTCTTACTTTTGCTGTTTCCGGCTCAA
TGTATTTTTAAGATCCTTTAAACTTATTCGTTTACTTTAATGGGATAAAT
TTTCGCGGGGATTAAATTTCGCGGGGATTAATTTTCGCGGATGGCACTAT
TGGGGGGCATTATTTTCTCGATTTTGTTACTTTTACTGTCAAACNGCCTC
AAATTTAGGCCTTCAGTACAAAAGTTATATTGTTTGAAACAAATTTCAAA
ACAGCCTTAGGGTCAGCCCAAAATCAAATTAACTTGCTCTTATAAAAAAA
CAAAGTTTCAACTCCTGTTGCACTCAAAACGACAGCCTTTGAAGGCTTGA
TTTATGCGATTTATGCAATAATTAAGCCGCACGTCCACGTCATTTGATTT
CTCCGAGATTAACTTGTATGGAACTAAATTTAGGTGGCAGTTTAAAAAGA
TGGGGAAGTTTGCATTTTCAAGGAGATTGACTTTCGACTGTTTTCGAATC
TATCTTCTTTTATAATTTCGTAACTGATCATCCATTCTGCCAGCACCACT
CTCTACTTGCGCCTCGATTTATCAGTATTAATTTTGGTTATTTCAATTGA
TTCTCAGATTCAAGCAATAAATATAACTGGAATCATTTCGATTTATTTTC
AGAGACGTGAAGACGGCACGGTATATGGTTTTCGGAAACTGGGTTTGCTT
TTGTGATTGGAAAAAGCTTTTAGGAATCAATGATACATTATTCTACAAAG
CGTGGCAAAGTTTCAAAAAAGAGGAGAAGTCGTTTGAAAGGCCCCTAAAA
ATGCAAAATAGATTCGCCAAGAAGACTTGGGTAACGAGGGCTTGGCTGAG
GATTTATGTCGATATGTATGGTGAGAAGATGCCAACGAGGAATCAAATTC
ATCTACCTTCATACTTAACAAAACTGAAACTTCACGGAGCTATGACTGCA
GAGTTCAAGTTACGCGATGACAAAGGATTTAACTACTCAAAGTTTTGTGA
ACTGTGGAAAAGGGAGTTTAGCAATGTGGTCATCCCAAAAGTAAGCTTTT
TATTTGAATTATAAGTATATTGCGTTTTTGCTAACCCATTTCCTAAATTT
ATGCTTCAGAAAATTTTTAATGGGCAATTTACGAATGTTTATGTTCTCAA
CTTTGTACGTTCGAAGTAATGCAAGGGCTTCTTTAAAGACACTTTCATTT
CCATTCGTTTCAGAGCGATCGTATGGCGAAGTGTGAATCTTGCACGATCT
TAATGGAGGAGAGACTGGAAGCAAAAACCAAGCTAACAAAGTCTTATCTG
GATAATGTCTTCAAATTGCATAACAAACTTCAATAGTAAGTGTTTCAAAT
CTTCTAGATGATGATAGAGAGAATAGAATTTTAATCAATTTAATAAGCAT
GCCAGAAAATTGGGTCAAAGAGAAGCCTTGGTTTTTATAAGCACCATACG
TCATGAATAAAGTGAAATCGAAAACTAAAGTGTTCAAAATCTCGAGACCA
TTAGCGTTATACCAAAAATATTTTTCCCGATTTCCTAGGGGCATTTTTAC
TATTAAAAATTTTCAATTACAGAGATTTGTATTACAGCGAACAACGGGAG
AAGTATTACAAACATAGGGAGGGCAAAGGCAAAGAACAGTCCTGAGAAGT
ATATGACTGTAATTATCGATGGCATGGATCAGCAAAAACTGCTTCTACCA
AGGCTTAATAACTTAAGCAAAGCATTCTCGGATGCCTTCAAACTCAAAAC
GCACTTGACTGGAGCACTCGACCATGGGCAGAAACCATTTTGCAAGCTTG
ACCTGTTTCAGTGGCCACATGATTCGAACTTGACGTTGAACATTCTTGTT
CTGATATTGAGCAGACGAACTAGTCTACCGGACACACTTTATCTCCAAAT
GGACAACTGTTACCGTGAATGTAAAAACCAATACGTCGTATCGTTCCTTG
CGCTTCTTGTCCATCTTGAAGTTTTCAAAAAGGTATGGTGTATTGGTTTT
TTTTTTCGTTTTCTATGACAATCTTTAAAAATTATCCTCTCTTCGATTAA
AAATGTTTTTTTGGATTTGTAATATATGTTTTGCGTTCTTAACTGACTAA
AATCTTGTCTTAATTATAGATCAAGTTGAACTTCATGATGAAAGGGTAAA
AATATTTCATATATTATTATTTGCCCATGAAATGACAACTAGCTATTAGC
CTAATCCACAACTGACTACAATGGTTATTATTTAGTTATTTTTGGAGCGA
ATATAGTGGCTTTATGATTGAATTGTGAGCTGAAAAGAAATTCTCTTCGG
TGATATACTAATAAGATGCCGAAAGTCACCCTAGAATTAAAAACTTGTCC
TTTTCTAGCATTTTCTTTTTCAATACCATTCAGACATACACATGATGACA
TTGATCAATTCTTTTCACGGATTTCAACCAACCCAAGCAACCTACTCAGG
GTAAATAGTAAATAATTTCGATTTCGTTGATTTTGGGAGTGGTGGGGATC
AATCACCCTAGACGTTGGTAGTTTTTAAAATACTTTTCCAATAAAAAAAA
TCACCAGTATGCACGAAATGTAGTAGTCTCAATAATGGCTCCTTAACTCA
AACGATCCTTTTGGTACCGTCAGAACAAAGAAAATCTTGTAAGTCAAATG
GTACGGGGCCAGAATAATGTATATTTGTGTGTGTATTTTTTAAGCCTCCA
AATAGTTAGCACTCTATCTCAGATAATCAATACCTATCACTGATTCACCA
GAAAACAATCTATAGCGAGTTTATGTATCCCGTATTTTCAATGGCGGCGA
CGGTTAGTTTTTTATTTTTCTCGGCTGAGGACTACGGTAAATCAGCGCTT
TTTCCGTAATCGATTTTGCGTGTCAAAAATTGTTTCATTACAAAAGGTAG
ATACATAAACTCGCTTAGGCTGCGGTGTGGGGTGGAAATATTTGAAGATA
ATAGTTCGGTAATCTCATTTTAGATCTTATGCGTGTTATCAGGGAAACCT
ACAAGCCAATGCCTGAAATATCATTGATGGAGTACATGTACAATATTCGG
TAATGGTTGGGTCCAATGATGAAAGGCCTTCACAATATTGTGTACCCGCA
CTGTTTCAAGATCGTAAAGTCCAACGGTGTGGCATCAATGAAATACAAAA
ACTGGGCCAACGACAAAGAATGGTTGCCACTTTACGAGACACTAAAAATT
TTAAATGTAAGTTATATAAGCATCGACTTACAGTATCATTATAATAAAGG
TGTGGACTGAGGTTCGGCAAAAAGATTCTAAGTGAGACATTTTGATTTGT
GGACTGCAAATATAATTCGAAAGATTTGCCATAAAGACTGCCTCTGAGAA
GAAATGTTCATTACCTATCCGTGTTTTTGCGATCATGAGACTGAGACATA
TAGAAGTAAAAATAAGATAACTGTAGATCCCAGTATTCTCCATTTTATGA
AACTCTTTTTTTACTGTTCATATAGGAGGAAAACATCAACCTTCAAATCA
CACCAAAGCTTTTGCCAGTTAACAAAGATTGCCAAGACTTTGCACGCCTG
AAGAACGATATTGGAAAGTACTACCGAGAATCTCGTCTTTTCAAGGTCGA
ACTGAAAGAGGAGTGGAGTGACTTGTTAAATATCGAGAGTGAGTTGTACC
AATACCAAGGTGAAACTCAATGGGGGCTTCCGAAATTGCTGGAAAAGACC
AATCCAACGGACTTCATAGCCTGGGACTCCAAGCTCATAATCTTAGAAAA
AACAAAAAATACCTCACCTCACAAAGTTCTAAAATTATAGAGCTTGGTGC
AGGTAGATTAGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNTAATAACTTCCGAACTACTTTTTCAAATTTAATGTATGATAGCT
CAAAATTCAAGTTAGAGCATCCTCTATACAATAAAAAAAGAATGAACAAA
AAAGTTAAATCCTGAAGCTCACAATATCTCGACAAAGTTGTATACTTTTT
TTTGGTGCACCCGGTATAACTTTTCAACCACTAAGTTTTAGCTTTCGGTA
ATTGGTTCTTTCAAAGGAAACATGGACTAGCGCCTAAAATGAAAGTAATT
ATTTTTGTTATAAGAATCATCTTTATAAGAGAATTCTCTATAAATTTCTT
TCAAAGCAAAAATGGAATAGCGCCTTAAATAGATGTGACTATTTTTGTTA
TAAGCATCAGCTTTATAAGAATTAAATCAATAACTCTAGATAGACGGTCA
TATACATTTCGGTAATTAGTTCTTACAAAGTAAATAAGGGACGGCGCATA
ATATGATCATATTTGCGGAACGACCGTTTTGAGGGCGCGAAGCGCCCGAA
TAGGGAGTGTAGCATCCTTTCTCTAGATCTGCGCGTGGCGTAAAAAATCT
GTATATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNATTCCGTGCAATGTTTACGAGACAAA
AGAGAAGACTGTACTGGAAAGCAGAATCAAAATGATAATTACTAGTTGCT
ATTTTCGTCTTTGAAGATTTCTTCGATATTTATTCGATAATGGAATCATT
TTGATTTGGCTTGATTGATTGTTGATTCCTCCATTGTCGCTTGCTGACTC
TCGAGAGATTTTTGTTTAACATTGGAGCTTGATCATCATCAATTAGAATA
ATGCCGATTTATATTTGTACGATAAANNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAAATTTTGAAGGGAAATGTA
TAATATAATTTTTGAATTGTTGATAAATTTGTCTTTGTAAAAGTTTTATA
GAGAGCTAAGTAATTGTTTCAAAAACTCACGAAAAGATGGGATAAAAGTC
TTTCAATTTATTCAGATAAATTACCAGCCTAAAGCCTAATGTAATATCTT
TGTTGTTGGTCATTCAGCCATTGCACAAGAAACATGTGTGTTCTTTTTTG
TCACTTGCACTATTTTTTATAAGAACCAGTAAATTTTTTTAAAGGTTTGG
CTGTCCTTTTTTGCACTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNCAATAAAAGTTTGACTTATAAAAATAATTTGTTAGTG
TCGAAATTTCTTCGCTTTGCGAAAACGGAACGGTCGTTCCGCAACCCCTT
TTATGTTGATTATTTGTTTTATAAGGAACTACTTTATAAGAATCAAATCA
ATAACTCTTGATAGACGGTGATATACCCTTCGGTCATTAGTTTTTACAGA
GTAAACAAGGGACAGCGCACACACAATATGAGCATATTAATTTTTCCTAT
AAGCAACTACTTTATGAGAATCAAATAACTCTTGGTAGAGTAATATTTAC
CTTTCAGTAATTACCGTATTCCTACGAATACACGCTCCTTCTCTGAGAAA
AAAGACTCCCTCAATGGGAGGTTTTAAAAGTTTTAATTAACACCCTTTTC
TTTAACACCCTTCCTGAAAGTCTTAAAATTAAAAAGACGCCCAAGGCGTT
TATTCGACGAAATACGGTAGTTTTTACAACCTAATAGAAAAGTACAAATG
AGATTTTCGATAGAACCTCGACTCGAGATAGTCACACCTTTGTAAACTTT
ATTGATTTTGTAGATATGAATTGCATTTCTTTACATTACAGTGAGATAAA
GTAAAATTGTCTTGGTTGTCTTTACCAATACATGGACTAATTTATGATAA
CAAAACTCCCTTTTCCTTTTCATGGCTCGATCTACGAGCAAAGTCATTAA
ATTTGATTGAATTATCCAATGAAATAGAGTGGGATTATCGAAGTTGTGAT
TCTCGCTCGAACTTGAAATTCTGAAGAATGTTACATAATTCAGGAATATT
TTGACACTGATTGTTAATGACATTTAAAAAAATTACATGTCTTTCTTACT
TTCCCCTTACAAATTAAACTAAGGCAAAATATTTGACTTTAAGCCATCTA
AAAGGAGACAAATTTAATTTTCTTGAAGCGGAATTGGCATTCACAAAGAC
ACAATGGCTCTATCGAAAGAAATAGGGAATTTTGCTAAATCTAACATTAG
TTTATTATAATTTTATAAGGACACGGTTTTTTTTCTAAGTGGAATAGGCT
TTCAGAGATTTGATTTATCAAACAAAAGCCAACAAATATTGTTTAGGAGT
TATGAATTGTGTTCTTATAAAGTTGATGCTCATGAGAAAAACAAAATTTT
CTAGCTTAAGCACTATCCTATGTTTGCTTTGAAAGAACCGATCACCGAAA
GCTAATATCTATTGGTTTGAGAGTTATGAATTGTGTTCTTATAAAGTTGA
TGCTCATGAGAAAAACAAAATTTTCTAGCTTAAGCACTATCCTATGTTTG
CTTTGAAAGAACCGATCACCGAAAGCTAATATCTATTGGTTTGAGAGTTA
TGAATTGTGTTCTTATAAAGTTAATGCTTATAAGAAAAATAAATCTTTCT
AGCTTAAGTACAATGCTATATTTGCTTTGAAAAAACCTACCGCCGAAAGC
TAATAATCATTGGTTTAAGAGTTATGAATTGTGTTCTTATAAAGTTGATG
CTTATAATAAAAACAACAATCGCCAAATGTTTGCCTTAGTCCAAGAACAA
TGTTCAATATATTACTTCTTGTATGTGAAAAATTAATGTTAAAATTTAGT
TAGTTTTTCAAAAAATAACTAAGTCAAAAAGGTTGTGTTTTACATATCTG
CGCAGAAATTTAATTACATATCTGCGCAGCTCAAAATTACATAGTTGCGC
AAAATAATTACATATTTGCGCAGAAATTATATATCTGCGCAAAATAATTA
CATATTTGCGCATAACAGCCGGGACTATAGCCCATAAACTAATCTTACTT
AAGTGTATGATCAATTATAGCTTTATAATACAACTGCGAAGAATAATAAT
TTTCCGATATAATATCGACACTTTGAGGAGGAGAAATAATTTGCCTCTTA
AGAGGCATGTGTAGGGATGTTTATTCGAAGTAATACGAAACAACAATTTT
TACAGACAAAACTCTATTTCAGACTTAAATCTTTTTAGGCATACACGGGA
GCATACAAGCAAGCCATGCAAAAGGGAAATGCAGTGGAAATAGTATCGGA
GCTGAAAATGGAATGTGGACAGATGGTAGCAATATGGCTGATTGATAGCA
AAACAGAACCTACAATAGGTAAATATTTAGAATACTTGTATTCTTTCACT
GGGCTCCGCTAGATAAGTGACTCAATTGATTACCGACCTACATATTACAT
CTATTAATATCAACCTTTTGATTTCTTAGGGAAGATCATCGAAGTTGAGG
AAAATCAAGTGAGAGTAAATTATTGGAAGGGAAGCTGGAATAAGAAATGG
GCTCCCCATATGCTCTATTCAAACGACAAAAGGCGCAAGATGATACCGTG
GGACGGCTGGATTGCAAAAGCAAGCGTTATTCTATATGGGTTTACACTAA
TCAACGACGTCCTGACCAAGTCACATCGTGAATATTTACGTAAGAAATAC
AAGGAATTGAAATAGATGCCGCTAGATGTATAATTTAACCTTTAAAATAG
GCCATTTCACGGTCGCAAATCGTAATGGGGAATAAGGACCACTGAGCACT
AATGACAACTTATTATTGGTCAAACTTTTTTGCGTCAAGCTAACCGGAAG
TCGTTACTAGAGGGCAACTATTCCTGACAACCATTTTCCATTTTGACTAT
GAAATAGCCTATTAGGTAGATTACTAATCTTTATTACAAGCACGGCTCCA
CCCAG

Coding sequence (CDS) from alignment at scaffold_155:149452..164506-

>TCONS_00049365 ID=TCONS_00049365|Name=TCONS_00049365|organism=Clytia hemisphaerica|type=CDS|length=1170bp|location=Sequence derived from alignment at scaffold_155:149452..164506- (Clytia hemisphaerica)
GGAAGATCATCGAAGTTGAGGAAAATCAAGTGAGAGTAAATTATTGGAAG
GGAAGCTGGAATAAGAAATGGGCTCCCCATATGCTCTATTCAAACGACAA
AAGGCGCAAGATGATACCGTGGGACGGCTGGATTGCAAAAGCAAGCGTTA
TTCTATATGGGTTTACACTAATCAACGACGTCCTGACCAAGTCACATCGT
GAATATTTACGTAAGAAATACAAGGAATTGAAATAGGCATACACGGGAGC
ATACAAGCAAGCCATGCAAAAGGGAAATGCAGTGGAAATAGTATCGGAGC
TGAAAATGGAATGTGGACAGATGGTAGCAATATGGCTGATTGATAGCAAA
ACAGAACCTACAATAGATGGACCATGGTGAAGCTCCACAGGGAAGATCAT
CGAAGTTGAGGAAAATCAAGTGAGAGTAAATTATTGGAAGGGAAGCTGGA
ATAAGAAATGGGCTCCCCATATGCTCTATTCAAACGACAAAAGGCGCAAG
ATGATACCGTGGGACGGCTGGATTGCAAAAGCAAGCGTTATTCTATATGG
GTTTACACTAATCAACGACGTCCTGACCAAGTCACATCGTGAATATTTAC
GTAAGAAATACAAGGAATTGAAATAGGCATACACGGGAGCATACAAGCAA
GCCATGCAAAAGGGAAATGCAGTGGAAATAGTATCGGAGCTGAAAATGGA
ATGTGGACAGATGGTAGCAATATGGCTGATTGATAGCAAAACAGAACCTA
CAATAGATGGACCATGGTGAAGCTCCACAGGGAAGATCATCGAAGTTGAG
GAAAATCAAGTGAGAGTAAATTATTGGAAGGGAAGCTGGAATAAGAAATG
GGCTCCCCATATGCTCTATTCAAACGACAAAAGGCGCAAGATGATACCGT
GGGACGGCTGGATTGCAAAAGCAAGCGTTATTCTATATGGGTTTACACTA
ATCAACGACGTCCTGACCAAGTCACATCGTGAATATTTACGTAAGAAATA
CAAGGAATTGAAATAGGCATACACGGGAGCATACAAGCAAGCCATGCAAA
AGGGAAATGCAGTGGAAATAGTATCGGAGCTGAAAATGGAATGTGGACAG
ATGGTAGCAATATGGCTGATTGATAGCAAAACAGAACCTACAATAGATGG
ACCATGGTGAAGCTCCACAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_031333XLOC_031333Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00049365-proteinTCONS_00049365-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00049365-exon-scaffold_155-1575043694:163976..164506TCONS_00049365-exon-scaffold_155-1575043694:163976..164506Clytia hemisphaericaexon
TCONS_00049365-exon-scaffold_155-1575043694:150039..150168TCONS_00049365-exon-scaffold_155-1575043694:150039..150168Clytia hemisphaericaexon
TCONS_00049365-exon-scaffold_155-1575043694:149452..149927TCONS_00049365-exon-scaffold_155-1575043694:149452..149927Clytia hemisphaericaexon
TCONS_00049365-exon-scaffold_155-1510915933:163976..164506TCONS_00049365-exon-scaffold_155-1510915933:163976..164506Clytia hemisphaericaexon
TCONS_00049365-exon-scaffold_155-1510915933:150039..150168TCONS_00049365-exon-scaffold_155-1510915933:150039..150168Clytia hemisphaericaexon
TCONS_00049365-exon-scaffold_155-1510915933:149452..149927TCONS_00049365-exon-scaffold_155-1510915933:149452..149927Clytia hemisphaericaexon
TCONS_00049365-exon-scaffold_155-1491911889:163976..164506TCONS_00049365-exon-scaffold_155-1491911889:163976..164506Clytia hemisphaericaexon
TCONS_00049365-exon-scaffold_155-1491911889:150039..150168TCONS_00049365-exon-scaffold_155-1491911889:150039..150168Clytia hemisphaericaexon
TCONS_00049365-exon-scaffold_155-1491911889:149452..149927TCONS_00049365-exon-scaffold_155-1491911889:149452..149927Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_155supercontigscaffold_155:149452..164506 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.92422	1.73603	2.99295	3.9686	4.30129	3.36921	4.55553	4.50006	3.28752	4.27992	3.64807	3.40124	2.92304	3.16641	6.13178	5.69287	2.92547	2.9723	2.81927	1.58011	3.08897	3.20482	1.30914	1.47154	3.35042	3.10524	2.19319	3.18351	7.55595	8.6739
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00049365 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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