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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00049373 ID=TCONS_00049373|Name=TCONS_00049373|organism=Clytia hemisphaerica|type=transcript|length=1123bp
NNTATGTTTGAAGGTTTCAGATAGTCTTTTTGCTCAGGTACTTGTAGAAA
AGACAAGGTATCTTCTAAAATAGATTTGGTAAATCCGTTGAAAAATCCTT
CCTCAAACGATCAAGCTCCTTTCCATATTGGTAGGTTTTGATACATCTCT
TGATGTCGTCGGTAGGAGCTAGTAGGCAGAGCTCACCAATTACTGAGTTA
ACATCTTCTTGTTTGGAAGTTTTGTTGCACTCATTATTTGCCATCCCAGA
CTTAGAAGATCAAACAAGACTGAGGGAGGGGTGTATCCGAAGAATGCTCG
CACAACGTGTAGATCAAGATAATGCAGATAAAATAAAGGATTGGTACCTG
CTCAGCTACGCATGGGAACCCAGGTGTTCTCTTGTCATGCGTAGCTGTTC
CAGGGTCAAAAGCTGTGAAATCAATCCTTCTTGTTAAATGGTACAGTACT
TCCACAATGACAAACCAGTTTTTCCActtcttgttttattttctgtttct
cttttttattttcactaaaaaagagAGGCTTCTCCCACGACACAGGTTca
gccttattcactaattcttaatggagtgaatttttttatctgtcttGCTC
TGAGCATTTAGCGAAAtgtaaaaaaaggtctatggttGACCAAtctaagc
agcaaaatttcaaaacaaatgaactacgcagctccgcttgcagctctact
ctaccatttttgttttgttcatttgagggctatgcatgttagcctacACT
GATACAAgatacccgatctcacggtaaaacagacgaacgaacggacggaa
ggacgaacgaacacagcttaatttataggacctccaccccaccgggatag
gtccaaaaatcaaatgCCCGCTGGCTTTGGAGGGGGGATCAGCAGAGTCA
TCAGGCTGCTGCCAGGTTCTGCCAGGTGTCAGGTTTGATTGAACCCCTTT
GGGCCTTGGAAACTATGATATTTTGGATATAAAAAGGCATTATCCGAAAT
TCGTTAATATgctaaagataaaaaaagcagACCAAACCTTGTTACAAAAA
GTCTGAACACAATAGACAGTTACAGGCTTTTGGCCTAGTAGGGCCCATTA
GTCAACCATAAAATATACTCTTG Run BLAST on NCBI transcript from alignment at scaffold_155:74749..75871 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00049373 ID=TCONS_00049373|Name=TCONS_00049373|organism=Clytia hemisphaerica|type=transcript|length=1123bp|location=Sequence derived from alignment at scaffold_155:74749..75871 (Clytia hemisphaerica)
CAAGAGTATATTTTATGGTTGACTAATGGGCCCTACTAGGCCAAAAGCCT
GTAACTGTCTATTGTGTTCAGACTTTTTGTAACAAGGTTTGGTctgcttt
ttttatctttagcATATTAACGAATTTCGGATAATGCCTTTTTATATCCA
AAATATCATAGTTTCCAAGGCCCAAAGGGGTTCAATCAAACCTGACACCT
GGCAGAACCTGGCAGCAGCCTGATGACTCTGCTGATCCCCCCTCCAAAGC
CAGCGGGcatttgatttttggacctatcccggtggggtggaggtcctata
aattaagctgtgttcgttcgtccttccgtccgttcgttcgtctgttttac
cgtgagatcgggtatcTTGTATCAGTgtaggctaacatgcatagccctca
aatgaacaaaacaaaaatggtagagtagagctgcaagcggagctgcgtag
ttcatttgttttgaaattttgctgcttagaTTGGTCaaccatagaccttt
ttttacaTTTCGCTAAATGCTCAGAGCaagacagataaaaaaattcactc
cattaagaattagtgaataaggctgAACCTGTGTCGTGGGAGAAGCCTct
cttttttagtgaaaataaaaaagagaaacagaaaataaaacaagaagTGG
AAAAACTGGTTTGTCATTGTGGAAGTACTGTACCATTTAACAAGAAGGAT
TGATTTCACAGCTTTTGACCCTGGAACAGCTACGCATGACAAGAGAACAC
CTGGGTTCCCATGCGTAGCTGAGCAGGTACCAATCCTTTATTTTATCTGC
ATTATCTTGATCTACACGTTGTGCGAGCATTCTTCGGATACACCCCTCCC
TCAGTCTTGTTTGATCTTCTAAGTCTGGGATGGCAAATAATGAGTGCAAC
AAAACTTCCAAACAAGAAGATGTTAACTCAGTAATTGGTGAGCTCTGCCT
ACTAGCTCCTACCGACGACATCAAGAGATGTATCAAAACCTACCAATATG
GAAAGGAGCTTGATCGTTTGAGGAAGGATTTTTCAACGGATTTACCAAAT
CTATTTTAGAAGATACCTTGTCTTTTCTACAAGTACCTGAGCAAAAAGAC
TATCTGAAACCTTCAAACATANN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00049373-exon-scaffold_155-1491911889:74749..75871 | TCONS_00049373-exon-scaffold_155-1491911889:74749..75871 | Clytia hemisphaerica | exon |
| TCONS_00049373-exon-scaffold_155-1510915933:74749..75871 | TCONS_00049373-exon-scaffold_155-1510915933:74749..75871 | Clytia hemisphaerica | exon |
| TCONS_00049373-exon-scaffold_155-1575043694:74749..75871 | TCONS_00049373-exon-scaffold_155-1575043694:74749..75871 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_155 | supercontig | scaffold_155:74749..75871 . |
Blast
The following BLAST results are available for this feature:
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