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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00049374 ID=TCONS_00049374|Name=TCONS_00049374|organism=Clytia hemisphaerica|type=transcript|length=974bp
attttaaaatacaggcggcaacgaagctcgcttcaaagacacaatggaag
atagacgtccagttatGATTTATCCCATGTGAAGGCGCCGTAGTGTACCA
AGTATTGACCGTCGTCTAGGAGATCAGGACTAACTCCAACTCGGTGCTGT
GTTTCacttaatgaaaagtaaatgcTACATTGCTAGGaccaacccatacc
atgtgatgGTCGTAGGGTGGACAGAAACTCTACAGGCCGTTCAGCGACTG
TGCGAAAAATCTGTGCTAGTGTCTAGACAAGCttgcaagaaataaaaact
ttggggctttgttcttttttaggaaaGTAATTCAAAGTCTGACGTCTGGC
GCATACAAAGCTATTCAGGCTTAGTGGTCTCAAAGCCAgactaatttcat
caaaattttatgcttatGTAGCTACGCAGTTCTGGAAGTTCTAAGCACTT
CTCAAAGTCTCAAAGACAGGCTACACAGATTTCTCGTTACatgcatgaat
aataaagatataggaaTTAGAGGATCTTGACGGATTTTACTCAGTAAGAT
TCTCCAGCTCGGGTTTTTTCGTGGTAAGTCTAAACATTTTAGGGCAATAT
AACCTAGAAGCacttaattctggtctgtaaaatacacacagcGATTTACA
TGTATTCTTGATTCTTTGCATGTGTCAAACTAAAGAATACGGTTCAACTT
TGTTTAATGTCGAGATACAATGAGAGACTTTGTCAAATCTTTGAATTCAT
AGCTTGGAAGTTTCACCGTTTTTTGGatcaaatcttaccaaaaataaaat
gcttataaagtgctgaccgGACACATTTAGCCCTTATATATTCCCCACGT
ACCTCTCTGAGTATAATATGAAGAATCGAGTGGCTCTAAACCTTATTAAG
CATCATTTCACtaattcatttcagacaaaaaggccaatttggagagaaaa
agatcttttttcgacggtaaggaa Run BLAST on NCBI transcript from alignment at scaffold_155:81215..82188 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00049374 ID=TCONS_00049374|Name=TCONS_00049374|organism=Clytia hemisphaerica|type=transcript|length=974bp|location=Sequence derived from alignment at scaffold_155:81215..82188 (Clytia hemisphaerica)
ttccttaccgtcgaaaaaagatctttttctctccaaattggcctttttgt
ctgaaatgaattaGTGAAATGATGCTTAATAAGGTTTAGAGCCACTCGAT
TCTTCATATTATACTCAGAGAGGTACGTGGGGAATATATAAGGGCTAAAT
GTGTCcggtcagcactttataagcattttatttttggtaagatttgatCC
AAAAAACGGTGAAACTTCCAAGCTATGAATTCAAAGATTTGACAAAGTCT
CTCATTGTATCTCGACATTAAACAAAGTTGAACCGTATTCTTTAGTTTGA
CACATGCAAAGAATCAAGAATACATGTAAATCgctgtgtgtattttacag
accagaattaagtGCTTCTAGGTTATATTGCCCTAAAATGTTTAGACTTA
CCACGAAAAAACCCGAGCTGGAGAATCTTACTGAGTAAAATCCGTCAAGA
TCCTCTAAttcctatatctttattattcatgcatGTAACGAGAAATCTGT
GTAGCCTGTCTTTGAGACTTTGAGAAGTGCTTAGAACTTCCAGAACTGCG
TAGCTACataagcataaaattttgatgaaattagtcTGGCTTTGAGACCA
CTAAGCCTGAATAGCTTTGTATGCGCCAGACGTCAGACTTTGAATTACtt
tcctaaaaaagaacaaagccccaaagtttttatttcttgcaaGCTTGTCT
AGACACTAGCACAGATTTTTCGCACAGTCGCTGAACGGCCTGTAGAGTTT
CTGTCCACCCTACGACcatcacatggtatgggttggtCCTAGCAATGTAg
catttacttttcattaagtGAAACACAGCACCGAGTTGGAGTTAGTCCTG
ATCTCCTAGACGACGGTCAATACTTGGTACACTACGGCGCCTTCACATGG
GATAAATCataactggacgtctatcttccattgtgtctttgaagcgagct
tcgttgccgcctgtattttaaaat
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00049374-exon-scaffold_155-1491911889:81215..82188 | TCONS_00049374-exon-scaffold_155-1491911889:81215..82188 | Clytia hemisphaerica | exon |
| TCONS_00049374-exon-scaffold_155-1510915933:81215..82188 | TCONS_00049374-exon-scaffold_155-1510915933:81215..82188 | Clytia hemisphaerica | exon |
| TCONS_00049374-exon-scaffold_155-1575043694:81215..82188 | TCONS_00049374-exon-scaffold_155-1575043694:81215..82188 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_155 | supercontig | scaffold_155:81215..82188 . |
Blast
The following BLAST results are available for this feature:
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