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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00049385 ID=TCONS_00049385|Name=TCONS_00049385|organism=Clytia hemisphaerica|type=transcript|length=966bp
ATGTCCGAACCTACCTTCACATTAACATGGTTCATTAATATGATTCGTAT
TATTTATAGGACTTCTTCAAAGAAAATTCGCTACTAAATAATCAAATTGA
TGAAACATTTACCAGTGATGTGGTGACCAACGGTGGGAGATAAAATGTTG
AAACGTTGACAAATTCGCACTTCCTTTACCAGGGGGAATATTTCTCTACC
AATATTcccttttttttctcgaaaaattaccatatttttttggatttgaa
aagaaaatggcGCTGAGAATTTTGTTCTGAAAGGCCTTATAGCGCAACTT
CCATTTCGACACCCCCTGAGAAAAACCGCCGTACGAGGAGGCAGCCCCGT
CTGCTCCCTGCTAACCACGCTACGTACTTCATTTTCCCCGACCGggaaga
aaataatttgaggTTTTCCTTCCAGACAGACTGACGTGAGCATTCAGGAT
GTATCAAAAAGGGTCCTAATCccgaaggagtaggaatcagggcgctgaca
gacactgtGATTTTACAAACTTGAGCTGCTAAGCCATAGCGTTTACCATG
ATACTCAAACGACACTGGGAAAGCGATGCTGAGGTTTATGCATAAAACAC
ATCACATTGAATTCATTATTATGAAAAACAGATAATATTACCATTGGGAA
ATCGCCCTATgaaaacacccctgtatcagcaCCCCTTTTTCGCAAACAGT
TCCNGGAAATTGCCCTATGAAAACGCCCCTGTATCAGCACCCCTTTTTCG
CGAACAGTTCCTTCgcgtttttcaggtttaattttTTACCAGGCAGTAAC
TTTCGAGAAAAAGGGTCGAAATCGCGAAAAAGGCGAAAGTTTCTGCATGC
GAAAGTTTCTGTCCTTAATTAAAGTACTCATACACCCATTTTGCTTTATA
AAGCATTCGAGAAATTTGTGCTGAGGCTCATTAGGCTTAGCAAACTTTTT
TTAGCCTCACATTGTG Run BLAST on NCBI transcript from alignment at scaffold_155:175790..176755 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00049385 ID=TCONS_00049385|Name=TCONS_00049385|organism=Clytia hemisphaerica|type=transcript|length=966bp|location=Sequence derived from alignment at scaffold_155:175790..176755 (Clytia hemisphaerica)
CACAATGTGAGGCTAAAAAAAGTTTGCTAAGCCTAATGAGCCTCAGCACA
AATTTCTCGAATGCTTTATAAAGCAAAATGGGTGTATGAGTACTTTAATT
AAGGACAGAAACTTTCGCATGCAGAAACTTTCGCCTTTTTCGCGATTTCG
ACCCTTTTTCTCGAAAGTTACTGCCTGGTAAaaaattaaacctgaaaaac
gcGAAGGAACTGTTCGCGAAAAAGGGGTGCTGATACAGGGGCGTTTTCAT
AGGGCAATTTCCNGGAACTGTTTGCGAAAAAGGGGtgctgatacaggggt
gttttcATAGGGCGATTTCCCAATGGTAATATTATCTGTTTTTCATAATA
ATGAATTCAATGTGATGTGTTTTATGCATAAACCTCAGCATCGCTTTCCC
AGTGTCGTTTGAGTATCATGGTAAACGCTATGGCTTAGCAGCTCAAGTTT
GTAAAATCacagtgtctgtcagcgccctgattcctactccttcggGATTA
GGACCCTTTTTGATACATCCTGAATGCTCACGTCAGTCTGTCTGGAAGGA
AAAcctcaaattattttcttccCGGTCGGGGAAAATGAAGTACGTAGCGT
GGTTAGCAGGGAGCAGACGGGGCTGCCTCCTCGTACGGCGGTTTTTCTCA
GGGGGTGTCGAAATGGAAGTTGCGCTATAAGGCCTTTCAGAACAAAATTC
TCAGCgccattttcttttcaaatccaaaaaaatatggtaatttttcgaga
aaaaaaagggAATATTGGTAGAGAAATATTCCCCCTGGTAAAGGAAGTGC
GAATTTGTCAACGTTTCAACATTTTATCTCCCACCGTTGGTCACCACATC
ACTGGTAAATGTTTCATCAATTTGATTATTTAGTAGCGAATTTTCTTTGA
AGAAGTCCTATAAATAATACGAATCATATTAATGAACCATGTTAATGTGA
AGGTAGGTTCGGACAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00049385-exon-scaffold_155-1491911889:175790..176755 | TCONS_00049385-exon-scaffold_155-1491911889:175790..176755 | Clytia hemisphaerica | exon |
| TCONS_00049385-exon-scaffold_155-1510915933:175790..176755 | TCONS_00049385-exon-scaffold_155-1510915933:175790..176755 | Clytia hemisphaerica | exon |
| TCONS_00049385-exon-scaffold_155-1575043694:175790..176755 | TCONS_00049385-exon-scaffold_155-1575043694:175790..176755 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_155 | supercontig | scaffold_155:175790..176755 . |
Blast
The following BLAST results are available for this feature:
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