TCONS_00049386 (transcript) - C. hemisphaerica

Overview
NameTCONS_00049386
Unique NameTCONS_00049386
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length127

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00049386 ID=TCONS_00049386|Name=TCONS_00049386|organism=Clytia hemisphaerica|type=transcript|length=127bp
AGGAACTCGTATAGATCCCAAAAGTGTCTTGGAGTGAGACCAATAAAGTA
TTTGGCTGTCTTCTCTGATTTTAATATTGATTCTACATCCATTGGGTTTG
AATTTTCATCACCAGAAGATGTTGATG
Run BLAST on NCBI

transcript from alignment at scaffold_155:188635..188761

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00049386 ID=TCONS_00049386|Name=TCONS_00049386|organism=Clytia hemisphaerica|type=transcript|length=127bp|location=Sequence derived from alignment at scaffold_155:188635..188761 (Clytia hemisphaerica)
CATCAACATCTTCTGGTGATGAAAATTCAAACCCAATGGATGTAGAATCA
ATATTAAAATCAGAGAAGACAGCCAAATACTTTATTGGTCTCACTCCAAG
ACACTTTTGGGATCTATACGAGTTCCT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_031350XLOC_031350Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00049386-exon-scaffold_155-1491911889:188635..188761TCONS_00049386-exon-scaffold_155-1491911889:188635..188761Clytia hemisphaericaexon
TCONS_00049386-exon-scaffold_155-1510915933:188635..188761TCONS_00049386-exon-scaffold_155-1510915933:188635..188761Clytia hemisphaericaexon
TCONS_00049386-exon-scaffold_155-1575043694:188635..188761TCONS_00049386-exon-scaffold_155-1575043694:188635..188761Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_155supercontigscaffold_155:188635..188761 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00049386 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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